| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315744
Identifier: 158315744
GI number: 158315744
Start: 4736833
End: 4737837
Strand: Reverse
Name: 158315744
Synonym: Franean1_3956
Alternate gene names: NA
Gene position: 4737837-4736833 (Counterclockwise)
Preceding gene: 158315745
Following gene: 158315743
Centisome position: 52.75
GC content: 73.93
Gene sequence:
>1005_bases ATGCCGACCACCGAGTCGACGACCCCCGCCGACCCCACCGGAGCCGCACCGCCCACCGCCCCCGGCGGCGGCACCGATGC CGGTGCCGATGCCGGTGCCGCCCGTCCGAGCGCGGCCGCCGGCCCGGAGAAGGTACCGGTACCGGTCTCCAACGGGATCA CGCTCATGGTCCGGGCGATGGCGCAGCCCGACCCGATGGCGCCCGTCGTGCTGCTGCTGCCGGCGATGGCCCTCAAGGCG AAGTTCTACCTGCCGATGGCCAGGGCGCTGTTCGCGGCGGGCCTGTCGGTGGCCACCCTCGACCAGCGCGGGTACGGCGA GAGCACGCCCGGCCTGCGCGAGCAGCCGAACTTCGGCTACCGCGAGCTGATCGAGGTCGACATGCCCGCGGCCGTCGGTG CCGTCCGGGCCCGCTTCCCCGGGGCCCCGCTGTACCTGTTCGGCCACAGCCTCGGCGGTCAGCTCGCCCTCTTCCACGCG GCGGCCGCGCCGGGCGAGATCGCCGGCGTCGTGACGATCGGCACCGGCACCCCGTACTGGAAGGCGTTCGGACGTCGCAA CTGGTTCGAGGCGTTCTGGAAGATCCAGACCATCGGCCTGGTCTCCCGGGTGCGCGGGTACTGGCCCGGCGGAATGCTCA TCGGCGGCGCGATGGCCGGTCAGGTGATGGTCGACTGGGCGCGCCAGTCCCGGACGAGCAGGTGCCGTCCCAGGGGCTCG ACGCGGCGCCACGACGACGCGCTGCGCGCGCTGGACCGGCGGGTGCTGGCGATCTCGCTGGACGACGACCGGCTCGGTCC CAGCTCGAACGTGGACTTCCTCTGCTCGCGGATGCCCGCGGCGCGGCTGACCCGGTGGCACGTCGTGGAGTCCTCCGGGG TCGCCCACCGCGACCACTTCGCCTGGATCAAGGACAGCGCGGTCATCGGCCGGGCCGCGGCGAGCTGGATCACCAGCGGG CGACTGCCCGCCGAGCAGGCCGGCGGAGAGAGGAACGGGCGATGA
Upstream 100 bases:
>100_bases GGTTCGACCTCGACGTCAGGGCGCTGCTCTACGACGACGCCGACGTGCTCGTCGCCCGGTTCCACTTCGACTACGCCTGC GCGATCGCCGGAGACTGACG
Downstream 100 bases:
>100_bases GCAGGACACGGCTGACGGTCCTGGGTGACAGCTTCGCGGAGGGCCGCGGCGACCCGCGGCCCGGCGGCGGCTACGCCGGC TGGGTGCCCCGGTTCGCCGA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase; Dehydrogenase
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPTTESTTPADPTGAAPPTAPGGGTDAGADAGAARPSAAAGPEKVPVPVSNGITLMVRAMAQPDPMAPVVLLLPAMALKA KFYLPMARALFAAGLSVATLDQRGYGESTPGLREQPNFGYRELIEVDMPAAVGAVRARFPGAPLYLFGHSLGGQLALFHA AAAPGEIAGVVTIGTGTPYWKAFGRRNWFEAFWKIQTIGLVSRVRGYWPGGMLIGGAMAGQVMVDWARQSRTSRCRPRGS TRRHDDALRALDRRVLAISLDDDRLGPSSNVDFLCSRMPAARLTRWHVVESSGVAHRDHFAWIKDSAVIGRAAASWITSG RLPAEQAGGERNGR
Sequences:
>Translated_334_residues MPTTESTTPADPTGAAPPTAPGGGTDAGADAGAARPSAAAGPEKVPVPVSNGITLMVRAMAQPDPMAPVVLLLPAMALKA KFYLPMARALFAAGLSVATLDQRGYGESTPGLREQPNFGYRELIEVDMPAAVGAVRARFPGAPLYLFGHSLGGQLALFHA AAAPGEIAGVVTIGTGTPYWKAFGRRNWFEAFWKIQTIGLVSRVRGYWPGGMLIGGAMAGQVMVDWARQSRTSRCRPRGS TRRHDDALRALDRRVLAISLDDDRLGPSSNVDFLCSRMPAARLTRWHVVESSGVAHRDHFAWIKDSAVIGRAAASWITSG RLPAEQAGGERNGR >Mature_333_residues PTTESTTPADPTGAAPPTAPGGGTDAGADAGAARPSAAAGPEKVPVPVSNGITLMVRAMAQPDPMAPVVLLLPAMALKAK FYLPMARALFAAGLSVATLDQRGYGESTPGLREQPNFGYRELIEVDMPAAVGAVRARFPGAPLYLFGHSLGGQLALFHAA AAPGEIAGVVTIGTGTPYWKAFGRRNWFEAFWKIQTIGLVSRVRGYWPGGMLIGGAMAGQVMVDWARQSRTSRCRPRGST RRHDDALRALDRRVLAISLDDDRLGPSSNVDFLCSRMPAARLTRWHVVESSGVAHRDHFAWIKDSAVIGRAAASWITSGR LPAEQAGGERNGR
Specific function: Unknown
COG id: COG4757
COG function: function code R; Predicted alpha/beta hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35375; Mature: 35244
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTESTTPADPTGAAPPTAPGGGTDAGADAGAARPSAAAGPEKVPVPVSNGITLMVRAM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC AQPDPMAPVVLLLPAMALKAKFYLPMARALFAAGLSVATLDQRGYGESTPGLREQPNFGY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCH RELIEVDMPAAVGAVRARFPGAPLYLFGHSLGGQLALFHAAAAPGEIAGVVTIGTGTPYW HHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCHHH KAFGRRNWFEAFWKIQTIGLVSRVRGYWPGGMLIGGAMAGQVMVDWARQSRTSRCRPRGS HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCC TRRHDDALRALDRRVLAISLDDDRLGPSSNVDFLCSRMPAARLTRWHVVESSGVAHRDHF CCCHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHCCCHHHHHEEEEECCCCCCCCCCC AWIKDSAVIGRAAASWITSGRLPAEQAGGERNGR EEECCCHHHHHHHHHHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure PTTESTTPADPTGAAPPTAPGGGTDAGADAGAARPSAAAGPEKVPVPVSNGITLMVRAM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC AQPDPMAPVVLLLPAMALKAKFYLPMARALFAAGLSVATLDQRGYGESTPGLREQPNFGY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCH RELIEVDMPAAVGAVRARFPGAPLYLFGHSLGGQLALFHAAAAPGEIAGVVTIGTGTPYW HHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCHHH KAFGRRNWFEAFWKIQTIGLVSRVRGYWPGGMLIGGAMAGQVMVDWARQSRTSRCRPRGS HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCC TRRHDDALRALDRRVLAISLDDDRLGPSSNVDFLCSRMPAARLTRWHVVESSGVAHRDHF CCCHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHCCCHHHHHEEEEECCCCCCCCCCC AWIKDSAVIGRAAASWITSGRLPAEQAGGERNGR EEECCCHHHHHHHHHHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA