| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cyp123 [H]
Identifier: 158315653
GI number: 158315653
Start: 4590957
End: 4592183
Strand: Reverse
Name: cyp123 [H]
Synonym: Franean1_3863
Alternate gene names: 158315653
Gene position: 4592183-4590957 (Counterclockwise)
Preceding gene: 158315655
Following gene: 158315652
Centisome position: 51.13
GC content: 68.87
Gene sequence:
>1227_bases ATGACGACGGTGACGACGGAGACCAGCGACGCCGCCGGCGACGTCTACTACGACCCGTACGACTTCGAGATCGACGCCGA CCCGTACCCGGTGTGGCGGCGGATGCGGGACTCCGTGCCGCTGTACTACAACGCCAAGTACGACTTCTTCGCCATCAGCC GGTTCGACGACGTCGAGAAGGTCATGGGCGACTTCGAGACCTACCGGTCGGGCCGCGGCTCCGTCCTCGAGATCATCAGG TCGAACATCGACTTCCCGCCGGGGAACATCCTGTTCGAAGACCCGCCCGTGCACGACATCCACCGCAGCATCCTCGCCCG GGTCTTCACCCCGCGGAAGATGCTCGCGATCGAGCCGAAGGTGCGCGAGTTCTGCGCCCGCTCGCTCGACTCGCTGGTGG CCGAGGGCAACTTCGACTTCATCGCCGACCTCGGCGCCCAGATGCCCATGCGGACGATCGGCATGCTGCTCGGCATCCCC GAGCAGGACCAGGAGGCGATCCGCGACGCCGTCGACGAGGGCCTCACCCTCACGGAGGGCGCGCCGAAGCCGCTGAACGA GGACCCCCTCGCGCGCTCGGAGGGCATGTTCGCCGACTACCTCGACTGGCGGGCACGCAACCCCTCGGACGACCTCATGA CCGAGCTGATCACCGCCGAGTTCGAGGACGAGACGGGCACGACCCGCCGGCTGACCCGCGCTGAGGTCCTCACCTACGTG AACATGCTGTCGAGCGCCGGCAACGAGACCACCACCCGGCTGATCGGCTGGACCGGGAAGGTCCTCTCCGACCACCCCGA CCAGCTCCGGCAGGTCGCACGGGACAGGTCGATGGTCAACCAGGTGATCGAGGAGGTGCTGCGCTTCGAGGCGCCCTCCC CCGTCCAGGCCCGCTACGTCGCCAGGGACGTCGAGGTGCACGGCCAGACGGTGCCGGAGGGCAGCGTCATGGTGCTGCTC AACGGCTCGGCCAACCGCGACGAGCGCCAGTTCGTCAACGGCGACAGCTTCGACATCCACCGGTCGATCAGCCGTCATGT CAGCTTCGGCCGCGGGCTGCACTTCTGCCTGGGCGCCGCGCTGGCCCGCCTCGAGGGACGGGTGGCGCTGGACGAGGTGC TCAAGCGCTGGGACCGCTGGGAGGTCGACTACGATCGCGCCGTCCAGGCCCGCACCTCCACCGTCCGCGGCTGGGCCAAG CTCCCGGTCACGGCGACGCCGAGGTGA
Upstream 100 bases:
>100_bases CTGTGGCGGACGCATCCGAGATCACAGCGCCCTCGATGACGCCGGCAGACCGGCGGCCCCGCGCGGCCGCGCCGGCGACC GCACCGGCGGGGGCGCGGCG
Downstream 100 bases:
>100_bases CCCCGCCCGCGCGGCGGGCACCGAAGAACGACCGGGGCCGGGACCCGAACGAGCGGGACCCGGCCGAACGGGTACCGGAC GAACAGAGCCGGCCGAGTGA
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MTTVTTETSDAAGDVYYDPYDFEIDADPYPVWRRMRDSVPLYYNAKYDFFAISRFDDVEKVMGDFETYRSGRGSVLEIIR SNIDFPPGNILFEDPPVHDIHRSILARVFTPRKMLAIEPKVREFCARSLDSLVAEGNFDFIADLGAQMPMRTIGMLLGIP EQDQEAIRDAVDEGLTLTEGAPKPLNEDPLARSEGMFADYLDWRARNPSDDLMTELITAEFEDETGTTRRLTRAEVLTYV NMLSSAGNETTTRLIGWTGKVLSDHPDQLRQVARDRSMVNQVIEEVLRFEAPSPVQARYVARDVEVHGQTVPEGSVMVLL NGSANRDERQFVNGDSFDIHRSISRHVSFGRGLHFCLGAALARLEGRVALDEVLKRWDRWEVDYDRAVQARTSTVRGWAK LPVTATPR
Sequences:
>Translated_408_residues MTTVTTETSDAAGDVYYDPYDFEIDADPYPVWRRMRDSVPLYYNAKYDFFAISRFDDVEKVMGDFETYRSGRGSVLEIIR SNIDFPPGNILFEDPPVHDIHRSILARVFTPRKMLAIEPKVREFCARSLDSLVAEGNFDFIADLGAQMPMRTIGMLLGIP EQDQEAIRDAVDEGLTLTEGAPKPLNEDPLARSEGMFADYLDWRARNPSDDLMTELITAEFEDETGTTRRLTRAEVLTYV NMLSSAGNETTTRLIGWTGKVLSDHPDQLRQVARDRSMVNQVIEEVLRFEAPSPVQARYVARDVEVHGQTVPEGSVMVLL NGSANRDERQFVNGDSFDIHRSISRHVSFGRGLHFCLGAALARLEGRVALDEVLKRWDRWEVDYDRAVQARTSTVRGWAK LPVTATPR >Mature_407_residues TTVTTETSDAAGDVYYDPYDFEIDADPYPVWRRMRDSVPLYYNAKYDFFAISRFDDVEKVMGDFETYRSGRGSVLEIIRS NIDFPPGNILFEDPPVHDIHRSILARVFTPRKMLAIEPKVREFCARSLDSLVAEGNFDFIADLGAQMPMRTIGMLLGIPE QDQEAIRDAVDEGLTLTEGAPKPLNEDPLARSEGMFADYLDWRARNPSDDLMTELITAEFEDETGTTRRLTRAEVLTYVN MLSSAGNETTTRLIGWTGKVLSDHPDQLRQVARDRSMVNQVIEEVLRFEAPSPVQARYVARDVEVHGQTVPEGSVMVLLN GSANRDERQFVNGDSFDIHRSISRHVSFGRGLHFCLGAALARLEGRVALDEVLKRWDRWEVDYDRAVQARTSTVRGWAKL PVTATPR
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46220; Mature: 46089
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVTTETSDAAGDVYYDPYDFEIDADPYPVWRRMRDSVPLYYNAKYDFFAISRFDDVEK CCEECCCCCCCCCCCEECCCCCEECCCCCHHHHHHHCCCCEEECCCCCEEEECCHHHHHH VMGDFETYRSGRGSVLEIIRSNIDFPPGNILFEDPPVHDIHRSILARVFTPRKMLAIEPK HHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHEEECHH VREFCARSLDSLVAEGNFDFIADLGAQMPMRTIGMLLGIPEQDQEAIRDAVDEGLTLTEG HHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCEECCC APKPLNEDPLARSEGMFADYLDWRARNPSDDLMTELITAEFEDETGTTRRLTRAEVLTYV CCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH NMLSSAGNETTTRLIGWTGKVLSDHPDQLRQVARDRSMVNQVIEEVLRFEAPSPVQARYV HHHHHCCCCHHHEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ARDVEVHGQTVPEGSVMVLLNGSANRDERQFVNGDSFDIHRSISRHVSFGRGLHFCLGAA HHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHH LARLEGRVALDEVLKRWDRWEVDYDRAVQARTSTVRGWAKLPVTATPR HHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCEECCCC >Mature Secondary Structure TTVTTETSDAAGDVYYDPYDFEIDADPYPVWRRMRDSVPLYYNAKYDFFAISRFDDVEK CEECCCCCCCCCCCEECCCCCEECCCCCHHHHHHHCCCCEEECCCCCEEEECCHHHHHH VMGDFETYRSGRGSVLEIIRSNIDFPPGNILFEDPPVHDIHRSILARVFTPRKMLAIEPK HHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHEEECHH VREFCARSLDSLVAEGNFDFIADLGAQMPMRTIGMLLGIPEQDQEAIRDAVDEGLTLTEG HHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCEECCC APKPLNEDPLARSEGMFADYLDWRARNPSDDLMTELITAEFEDETGTTRRLTRAEVLTYV CCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH NMLSSAGNETTTRLIGWTGKVLSDHPDQLRQVARDRSMVNQVIEEVLRFEAPSPVQARYV HHHHHCCCCHHHEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ARDVEVHGQTVPEGSVMVLLNGSANRDERQFVNGDSFDIHRSISRHVSFGRGLHFCLGAA HHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHH LARLEGRVALDEVLKRWDRWEVDYDRAVQARTSTVRGWAKLPVTATPR HHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]