Click here to switch to the map view.

The map label for this gene is 158315621

Identifier: 158315621

GI number: 158315621

Start: 4552212

End: 4552496

Strand: Reverse

Name: 158315621

Synonym: Franean1_3830

Alternate gene names: NA

Gene position: 4552496-4552212 (Counterclockwise)

Preceding gene: 158315622

Following gene: 158315618

Centisome position: 50.68

GC content: 67.72

Gene sequence:

>285_bases
GTGGTATGCACACCGCCACAGTCGCCGCAGGCGAACGCGATCGCGGAACGCTGGATCGGCACCGCCCGCCACGAATGCAC
CGACAGACTCCTGATCGTCTCCGAACGACACCTGACATCAGTCCTCGACAGCTACGCGAAGCATTTCAACACCCACCGGC
CCCACCGCTCCCTCAGCCAGCGCCCACCCGACCCGCCACCGGTGGTCACCCCGCCCTCGGGGTCTACCGTCCGGCGCACA
CGCATCCTCGGCGGGCTGATCAACGAGTACCGCAACGCCGCCTGA

Upstream 100 bases:

>100_bases
CCTCGACGAGCGTGGCCACCGGTTCCGGTTTCTCCTCCGTGACCGCGATACAAAGTTCACGGCTCCGTTCGACGCCGTCT
TCACCGCAGCCGGCATCGAC

Downstream 100 bases:

>100_bases
CGACGCCCGCAGACAATCACCTCAATGGCAAAAGGCCAGCTCACAGGCCGAAACCCGAGTTCTGGAGCCCCACAGGCGGC
ACTATGGTGCTCAGCCGGGC

Product: putative transposase

Products: NA

Alternate protein names: Integrase; Transposase; LOW QUALITY PROTEIN Integrase

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MVCTPPQSPQANAIAERWIGTARHECTDRLLIVSERHLTSVLDSYAKHFNTHRPHRSLSQRPPDPPPVVTPPSGSTVRRT
RILGGLINEYRNAA

Sequences:

>Translated_94_residues
MVCTPPQSPQANAIAERWIGTARHECTDRLLIVSERHLTSVLDSYAKHFNTHRPHRSLSQRPPDPPPVVTPPSGSTVRRT
RILGGLINEYRNAA
>Mature_94_residues
MVCTPPQSPQANAIAERWIGTARHECTDRLLIVSERHLTSVLDSYAKHFNTHRPHRSLSQRPPDPPPVVTPPSGSTVRRT
RILGGLINEYRNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10502; Mature: 10502

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCTPPQSPQANAIAERWIGTARHECTDRLLIVSERHLTSVLDSYAKHFNTHRPHRSLSQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
RPPDPPPVVTPPSGSTVRRTRILGGLINEYRNAA
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVCTPPQSPQANAIAERWIGTARHECTDRLLIVSERHLTSVLDSYAKHFNTHRPHRSLSQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
RPPDPPPVVTPPSGSTVRRTRILGGLINEYRNAA
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA