Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315586

Identifier: 158315586

GI number: 158315586

Start: 4500286

End: 4500921

Strand: Reverse

Name: 158315586

Synonym: Franean1_3795

Alternate gene names: NA

Gene position: 4500921-4500286 (Counterclockwise)

Preceding gene: 158315587

Following gene: 158315583

Centisome position: 50.11

GC content: 63.36

Gene sequence:

>636_bases
GTGGCGTGGAAGTCCCACTGGCGGGTTGGCCGGTTCGATGTATTGTGTGGCGGTTCCGCTGCGGCCGGCGTCGTTCTCTG
GCAGATCACCAGCGACCCGGTGCTCTCCCTCCTGTTCAGCGTGTTGGCCGATCTTCTCGCCTCCATCCCCACCCTGATGA
AAGCGTACGATGCACCAACCTCGGAAAGAGCATCTCCATACTTTGCAAGCCTGGTTAGCATGACCGTCACCTTGCTGACG
ATATCCGACTGGAAATTCATGGAGTACGCTTTCCCGCTGTACATGCTACTCATCAACACGACTGTCTTCGGCGTCGTCCG
AATGCGTTCCACCCAGTTCGGTCGGCGCCCGTACGAGGAGGTTGTGAGCCTGCCGCGCCGCCCGGCGGCGGTGCCATGGC
AGCCGCACCCGGTGCGGGAGTATCCCCTCGTCATCTCGCGGCCCTCATCGAACCTGTTTCGGAGCGGAGTGTCTCCCGCC
CACCGGACCTCGTCCCGTCGTTCCCAGGCATCCGCAGCCGATCACACAGCGGCGCGCAGTCACTACATTGCCGATCCGGA
CGGCACCGAGATCGAGCTGTACAGCGCCGTACGGGTCGGCCGCCTCCACCGCGCCTGGCCCTGTCGACGAAAATAG

Upstream 100 bases:

>100_bases
TTCTGGGGGCTGACACGCGCAGGTTCAGGACGGCGTCACGCCGCAGGCCTGGGTCACCCTCACACTCGGCACCAGCCCAT
TGCTGGTCTTTGTCCTGTCG

Downstream 100 bases:

>100_bases
GCGTCACCAACAAATTGTGTCCGTTCGCGGTGGCATGGCCACGCGCCGGCGCCCTCACTTTGCCGAATACCGACCGGCAG
AGAAGATCGCCCGCGATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MAWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPTSERASPYFASLVSMTVTLLT
ISDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEEVVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPA
HRTSSRRSQASAADHTAARSHYIADPDGTEIELYSAVRVGRLHRAWPCRRK

Sequences:

>Translated_211_residues
MAWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPTSERASPYFASLVSMTVTLLT
ISDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEEVVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPA
HRTSSRRSQASAADHTAARSHYIADPDGTEIELYSAVRVGRLHRAWPCRRK
>Mature_210_residues
AWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPTSERASPYFASLVSMTVTLLTI
SDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEEVVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPAH
RTSSRRSQASAADHTAARSHYIADPDGTEIELYSAVRVGRLHRAWPCRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23666; Mature: 23534

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPT
CCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SERASPYFASLVSMTVTLLTISDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEE
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPAHRTSSRRSQASAADHTAARS
HHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
HYIADPDGTEIELYSAVRVGRLHRAWPCRRK
CCCCCCCCCEEEEHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPT
CCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SERASPYFASLVSMTVTLLTISDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEE
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPAHRTSSRRSQASAADHTAARS
HHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
HYIADPDGTEIELYSAVRVGRLHRAWPCRRK
CCCCCCCCCEEEEHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA