| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315586
Identifier: 158315586
GI number: 158315586
Start: 4500286
End: 4500921
Strand: Reverse
Name: 158315586
Synonym: Franean1_3795
Alternate gene names: NA
Gene position: 4500921-4500286 (Counterclockwise)
Preceding gene: 158315587
Following gene: 158315583
Centisome position: 50.11
GC content: 63.36
Gene sequence:
>636_bases GTGGCGTGGAAGTCCCACTGGCGGGTTGGCCGGTTCGATGTATTGTGTGGCGGTTCCGCTGCGGCCGGCGTCGTTCTCTG GCAGATCACCAGCGACCCGGTGCTCTCCCTCCTGTTCAGCGTGTTGGCCGATCTTCTCGCCTCCATCCCCACCCTGATGA AAGCGTACGATGCACCAACCTCGGAAAGAGCATCTCCATACTTTGCAAGCCTGGTTAGCATGACCGTCACCTTGCTGACG ATATCCGACTGGAAATTCATGGAGTACGCTTTCCCGCTGTACATGCTACTCATCAACACGACTGTCTTCGGCGTCGTCCG AATGCGTTCCACCCAGTTCGGTCGGCGCCCGTACGAGGAGGTTGTGAGCCTGCCGCGCCGCCCGGCGGCGGTGCCATGGC AGCCGCACCCGGTGCGGGAGTATCCCCTCGTCATCTCGCGGCCCTCATCGAACCTGTTTCGGAGCGGAGTGTCTCCCGCC CACCGGACCTCGTCCCGTCGTTCCCAGGCATCCGCAGCCGATCACACAGCGGCGCGCAGTCACTACATTGCCGATCCGGA CGGCACCGAGATCGAGCTGTACAGCGCCGTACGGGTCGGCCGCCTCCACCGCGCCTGGCCCTGTCGACGAAAATAG
Upstream 100 bases:
>100_bases TTCTGGGGGCTGACACGCGCAGGTTCAGGACGGCGTCACGCCGCAGGCCTGGGTCACCCTCACACTCGGCACCAGCCCAT TGCTGGTCTTTGTCCTGTCG
Downstream 100 bases:
>100_bases GCGTCACCAACAAATTGTGTCCGTTCGCGGTGGCATGGCCACGCGCCGGCGCCCTCACTTTGCCGAATACCGACCGGCAG AGAAGATCGCCCGCGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MAWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPTSERASPYFASLVSMTVTLLT ISDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEEVVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPA HRTSSRRSQASAADHTAARSHYIADPDGTEIELYSAVRVGRLHRAWPCRRK
Sequences:
>Translated_211_residues MAWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPTSERASPYFASLVSMTVTLLT ISDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEEVVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPA HRTSSRRSQASAADHTAARSHYIADPDGTEIELYSAVRVGRLHRAWPCRRK >Mature_210_residues AWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPTSERASPYFASLVSMTVTLLTI SDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEEVVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPAH RTSSRRSQASAADHTAARSHYIADPDGTEIELYSAVRVGRLHRAWPCRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23666; Mature: 23534
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPT CCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SERASPYFASLVSMTVTLLTISDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEE CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPAHRTSSRRSQASAADHTAARS HHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC HYIADPDGTEIELYSAVRVGRLHRAWPCRRK CCCCCCCCCEEEEHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AWKSHWRVGRFDVLCGGSAAAGVVLWQITSDPVLSLLFSVLADLLASIPTLMKAYDAPT CCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SERASPYFASLVSMTVTLLTISDWKFMEYAFPLYMLLINTTVFGVVRMRSTQFGRRPYEE CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VVSLPRRPAAVPWQPHPVREYPLVISRPSSNLFRSGVSPAHRTSSRRSQASAADHTAARS HHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC HYIADPDGTEIELYSAVRVGRLHRAWPCRRK CCCCCCCCCEEEEHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA