| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158315562
Identifier: 158315562
GI number: 158315562
Start: 4469974
End: 4470315
Strand: Reverse
Name: 158315562
Synonym: Franean1_3769
Alternate gene names: NA
Gene position: 4470315-4469974 (Counterclockwise)
Preceding gene: 158315563
Following gene: 158315559
Centisome position: 49.77
GC content: 72.81
Gene sequence:
>342_bases ATGAGTTGGCGGGATCGGCTGTTGCTGCGCCGGTATGGCCAGGGCCGTTCGAGGAGTCGGGCCACGCTGCTCGATCGGGA GGCCAGCCCCGCCGACCTCGCCGGGCTGCGGGCCTTCGTCGCGGAGCGGATCGGGGTGGAGTTCTACGTCGAGCCGGAGA CCACGGCGACCGACACGACGGTCGTCGCGGTGGACCGGGACGGCGACTGGATCCGCCGGCGGGTCGGGACCCCGACGGTG GCCGCCAAGCTGGCCCGGTCGGTGAACGTGCCCGTGTACGACGCGGCGGTGCTCGGGTATCCGCGGCGGATGCGGGAACG GAACCGGACCCACCGAAGGTGA
Upstream 100 bases:
>100_bases TGATCCAAGGGTGTTCTGATCTGCCGTTAAGGCTTGTTTAGGACGGCGGCGCTGTGATGGTCGGAGTCGACTGGAGCCGG GTCCTTCGGAGGGGCGTCTG
Downstream 100 bases:
>100_bases CCCCGCGGCCGGCTGATCCCTGACCTCGACTGTTTCGGGTGCGGCGGATGGTGGTGGTGAGCGCCACCTATGCCAGGCTG GCCCGTCTCCCGGGCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSWRDRLLLRRYGQGRSRSRATLLDREASPADLAGLRAFVAERIGVEFYVEPETTATDTTVVAVDRDGDWIRRRVGTPTV AAKLARSVNVPVYDAAVLGYPRRMRERNRTHRR
Sequences:
>Translated_113_residues MSWRDRLLLRRYGQGRSRSRATLLDREASPADLAGLRAFVAERIGVEFYVEPETTATDTTVVAVDRDGDWIRRRVGTPTV AAKLARSVNVPVYDAAVLGYPRRMRERNRTHRR >Mature_112_residues SWRDRLLLRRYGQGRSRSRATLLDREASPADLAGLRAFVAERIGVEFYVEPETTATDTTVVAVDRDGDWIRRRVGTPTVA AKLARSVNVPVYDAAVLGYPRRMRERNRTHRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12942; Mature: 12811
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRDRLLLRRYGQGRSRSRATLLDREASPADLAGLRAFVAERIGVEFYVEPETTATDTT CCHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEE VVAVDRDGDWIRRRVGTPTVAAKLARSVNVPVYDAAVLGYPRRMRERNRTHRR EEEEECCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure SWRDRLLLRRYGQGRSRSRATLLDREASPADLAGLRAFVAERIGVEFYVEPETTATDTT CHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEE VVAVDRDGDWIRRRVGTPTVAAKLARSVNVPVYDAAVLGYPRRMRERNRTHRR EEEEECCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA