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The map label for this gene is dppC [H]

Identifier: 158315546

GI number: 158315546

Start: 4445473

End: 4446456

Strand: Reverse

Name: dppC [H]

Synonym: Franean1_3753

Alternate gene names: 158315546

Gene position: 4446456-4445473 (Counterclockwise)

Preceding gene: 158315547

Following gene: 158315545

Centisome position: 49.5

GC content: 72.97

Gene sequence:

>984_bases
GTGACCGTCTCGGCTGCCCACATCGCCAGCCCGGCCGCCGGAGCCGGCCCGGCCACCCGCGGAACCGGCCCGGTCACCAC
CGGAGCGGATCCGGTCACCACCGGAGCCGGCCGCGCCGCCGGCGAGGCGCTGCTCGACGAGTCCCAGCCCGGCGGACGGC
GAGCCAACCTCGCCGCGAGTCTGCGGACCCTCGGTTCCAGGCCGGGATTCGTGATCGCGGTGCTGTTCATCGCCTTCGTG
GTGGTGACGGCGTTCGCGCCGGGCCTGTTCACCTCGCACGATCCCTACGCGACCGCGCCGGCCGACCGGCTGGTCGGCCC
GGGTGCCGGCCACCTGTTCGGCACCGACGAGCTCGGCCGCGACCTGTGGTCCCGCATGCTGCACGGCTCGGCACTGACGA
TCAAAGCCACCCTGATCGCGCTCGGGATCGCGATCGTGGCCGGACTCGCGCTCGGCGTGATCGCCGGCTTCTTCGGTGGT
CTCGTCGACGCGCTGCTCATGCGGGGCGTGGACGTGCTGCTGGCCATCCCGAGCCTGCTGATGGCGCTGTCCATCGTCAC
GGCCCTGGGTTTCGGCACGGTGCCGGTCGCCGTCGCCGTCGGCGTCGGCATCGTGCCGGGATTCGCCCGGACCACCCGCG
CCGAGGTGCTGCGGGTGAAGACCCTGCCCTACGTCGAGGCGGCGCGTGGCGGGGGGGCGTCCTGGCTGCGGGTGCTGCTG
CGCCACGTGCTGCCGAACTCGTGGGGCCCGGTCGCCGTGCTCGCCGTGCTGGACACGGGCGTCGCGATCATCGCGATCGC
GTCGCTGAGCTTCCTGGGCTTCGGCGCGGCGCCGCCGACCGCCGAGTGGGGCACCCTCATCTCCGCCGGCCGCAACTACC
TCATCACCGCTCCGTGGGTCTCGCTGCTCCCCGGGCTGTTCGTCGCCATGACGGTGCTGAGCCTCAACCACATCTCGAAG
ACCCTCCAGGAGCTCGAGCGATGA

Upstream 100 bases:

>100_bases
TGGCGGCCGCCGTCTTCGTCTTCGTCAACCTCGTGGTCGATCTGCTCTATCCGTTGCTGGACCCCCGCATCGTGCAGGGC
CGGCGGAAGGTGGCCTCATC

Downstream 100 bases:

>100_bases
CGGCCGGAACGAGCCAACTGACGAGCCCGCCGACAAGCCCGCTGGTCAGCCCACTGGTGACGATCCGGGATCTCCACGTC
GGCTATGTCCGCCGCCGCCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTVSAAHIASPAAGAGPATRGTGPVTTGADPVTTGAGRAAGEALLDESQPGGRRANLAASLRTLGSRPGFVIAVLFIAFV
VVTAFAPGLFTSHDPYATAPADRLVGPGAGHLFGTDELGRDLWSRMLHGSALTIKATLIALGIAIVAGLALGVIAGFFGG
LVDALLMRGVDVLLAIPSLLMALSIVTALGFGTVPVAVAVGVGIVPGFARTTRAEVLRVKTLPYVEAARGGGASWLRVLL
RHVLPNSWGPVAVLAVLDTGVAIIAIASLSFLGFGAAPPTAEWGTLISAGRNYLITAPWVSLLPGLFVAMTVLSLNHISK
TLQELER

Sequences:

>Translated_327_residues
MTVSAAHIASPAAGAGPATRGTGPVTTGADPVTTGAGRAAGEALLDESQPGGRRANLAASLRTLGSRPGFVIAVLFIAFV
VVTAFAPGLFTSHDPYATAPADRLVGPGAGHLFGTDELGRDLWSRMLHGSALTIKATLIALGIAIVAGLALGVIAGFFGG
LVDALLMRGVDVLLAIPSLLMALSIVTALGFGTVPVAVAVGVGIVPGFARTTRAEVLRVKTLPYVEAARGGGASWLRVLL
RHVLPNSWGPVAVLAVLDTGVAIIAIASLSFLGFGAAPPTAEWGTLISAGRNYLITAPWVSLLPGLFVAMTVLSLNHISK
TLQELER
>Mature_326_residues
TVSAAHIASPAAGAGPATRGTGPVTTGADPVTTGAGRAAGEALLDESQPGGRRANLAASLRTLGSRPGFVIAVLFIAFVV
VTAFAPGLFTSHDPYATAPADRLVGPGAGHLFGTDELGRDLWSRMLHGSALTIKATLIALGIAIVAGLALGVIAGFFGGL
VDALLMRGVDVLLAIPSLLMALSIVTALGFGTVPVAVAVGVGIVPGFARTTRAEVLRVKTLPYVEAARGGGASWLRVLLR
HVLPNSWGPVAVLAVLDTGVAIIAIASLSFLGFGAAPPTAEWGTLISAGRNYLITAPWVSLLPGLFVAMTVLSLNHISKT
LQELER

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=253, Percent_Identity=39.1304347826087, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1787054, Length=253, Percent_Identity=39.1304347826087, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1789964, Length=239, Percent_Identity=39.7489539748954, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1789889, Length=236, Percent_Identity=33.8983050847458, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1787498, Length=289, Percent_Identity=31.1418685121107, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787549, Length=205, Percent_Identity=37.0731707317073, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788505, Length=244, Percent_Identity=29.5081967213115, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33168; Mature: 33037

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS00141 ASP_PROTEASE ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSAAHIASPAAGAGPATRGTGPVTTGADPVTTGAGRAAGEALLDESQPGGRRANLAAS
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH
LRTLGSRPGFVIAVLFIAFVVVTAFAPGLFTSHDPYATAPADRLVGPGAGHLFGTDELGR
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHH
DLWSRMLHGSALTIKATLIALGIAIVAGLALGVIAGFFGGLVDALLMRGVDVLLAIPSLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
MALSIVTALGFGTVPVAVAVGVGIVPGFARTTRAEVLRVKTLPYVEAARGGGASWLRVLL
HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHH
RHVLPNSWGPVAVLAVLDTGVAIIAIASLSFLGFGAAPPTAEWGTLISAGRNYLITAPWV
HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCHH
SLLPGLFVAMTVLSLNHISKTLQELER
HHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TVSAAHIASPAAGAGPATRGTGPVTTGADPVTTGAGRAAGEALLDESQPGGRRANLAAS
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH
LRTLGSRPGFVIAVLFIAFVVVTAFAPGLFTSHDPYATAPADRLVGPGAGHLFGTDELGR
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHH
DLWSRMLHGSALTIKATLIALGIAIVAGLALGVIAGFFGGLVDALLMRGVDVLLAIPSLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
MALSIVTALGFGTVPVAVAVGVGIVPGFARTTRAEVLRVKTLPYVEAARGGGASWLRVLL
HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHH
RHVLPNSWGPVAVLAVLDTGVAIIAIASLSFLGFGAAPPTAEWGTLISAGRNYLITAPWV
HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCHH
SLLPGLFVAMTVLSLNHISKTLQELER
HHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]