Click here to switch to the map view.

The map label for this gene is yqjH [C]

Identifier: 158315443

GI number: 158315443

Start: 4323237

End: 4324058

Strand: Reverse

Name: yqjH [C]

Synonym: Franean1_3647

Alternate gene names: 158315443

Gene position: 4324058-4323237 (Counterclockwise)

Preceding gene: 158315446

Following gene: 158315442

Centisome position: 48.14

GC content: 72.14

Gene sequence:

>822_bases
ATGGCCACGACTGGTCGCACCCGGCCCGTTCGAACGCAGGCGGTTCTCGCCGTCCAGGAGAAGAGCTGGATCAGCCCCGG
CATCGTCCGCGTCGTGCTCGGCGGCCCCGGATTCGATGCCTACAACGACAACGCGTTCACCGACAAGTACGTGAAGATCT
TCTTCGCCGATCCGGCGCACGGCCTGGAGCCACCGTACGACCTCGCCGCGCTACGGGCCGAGCACCCGGAGAAGCTGCCC
GCGACCCGGACCTACACCGTCCGCTGGGCCGACCCCGACACCCGCCGGCTGGCCATCGACTTCATCGTGCACGGTGACGA
GGGCATCGCCGGGCCCTGGGCCGCGGGCGCCGAGGTCGACGACCTGCTCGTCCTCAGCGGCGCCGGTGGCGCCTACCGCC
CCGACCCGGCCGCCGACTGGCACCTGCTGGCCGGCGACGAGACCGCGATCCCCTCCACCACCTCGGCCCTGGCCGCGATG
CCCGCCGCGGCGACGGGCTCGGTGCTCCTGCTCGTCGACTCCGCGAAGTACGAGATCCCCATCCCCCGGCCCGACGGCGT
CAACCTGCGCTGGCTGCACCGGGAGACGGCGGTGGCGGACGTCGACCCACTCGTCGACGCGCTGCGAGAGCTGCCCTGGC
CCACCGGAACGCCACAGGTGTTCGTGCACGGCGAGCGAGGCACCGTCAAAGCCGCCCGACGCCTGCTCACCGTGGATCGC
GGGGTGCCCCGCGAACAGCTCTCGATCTCCGCGTACTGGGCCGCTGGCCGCACCGAGGACCGGTTCCAGGCCGAGAAGCG
CGAGCCCATCGGCCAGATCTAG

Upstream 100 bases:

>100_bases
CGTCGCCGACGCCCGAGCGACACCGGCAGTTTGGTCAGGTTAGGCTTACCTTCATTCAAAGTCTCCGGCGGCCCAGCCGG
CGACGAAGGAGGTCAGGACC

Downstream 100 bases:

>100_bases
CGCCGATCTGAAGCCGCGTCCGCGAAGATCGGCTCTGCGGCGCGGACGCGCCAGGCAGGTTCCGGCGCCGGCCGAGCAGA
CATGGCGATCGGCAGTGGAA

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MATTGRTRPVRTQAVLAVQEKSWISPGIVRVVLGGPGFDAYNDNAFTDKYVKIFFADPAHGLEPPYDLAALRAEHPEKLP
ATRTYTVRWADPDTRRLAIDFIVHGDEGIAGPWAAGAEVDDLLVLSGAGGAYRPDPAADWHLLAGDETAIPSTTSALAAM
PAAATGSVLLLVDSAKYEIPIPRPDGVNLRWLHRETAVADVDPLVDALRELPWPTGTPQVFVHGERGTVKAARRLLTVDR
GVPREQLSISAYWAAGRTEDRFQAEKREPIGQI

Sequences:

>Translated_273_residues
MATTGRTRPVRTQAVLAVQEKSWISPGIVRVVLGGPGFDAYNDNAFTDKYVKIFFADPAHGLEPPYDLAALRAEHPEKLP
ATRTYTVRWADPDTRRLAIDFIVHGDEGIAGPWAAGAEVDDLLVLSGAGGAYRPDPAADWHLLAGDETAIPSTTSALAAM
PAAATGSVLLLVDSAKYEIPIPRPDGVNLRWLHRETAVADVDPLVDALRELPWPTGTPQVFVHGERGTVKAARRLLTVDR
GVPREQLSISAYWAAGRTEDRFQAEKREPIGQI
>Mature_272_residues
ATTGRTRPVRTQAVLAVQEKSWISPGIVRVVLGGPGFDAYNDNAFTDKYVKIFFADPAHGLEPPYDLAALRAEHPEKLPA
TRTYTVRWADPDTRRLAIDFIVHGDEGIAGPWAAGAEVDDLLVLSGAGGAYRPDPAADWHLLAGDETAIPSTTSALAAMP
AAATGSVLLLVDSAKYEIPIPRPDGVNLRWLHRETAVADVDPLVDALRELPWPTGTPQVFVHGERGTVKAARRLLTVDRG
VPREQLSISAYWAAGRTEDRFQAEKREPIGQI

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=256, Percent_Identity=30.859375, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 29598; Mature: 29466

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTGRTRPVRTQAVLAVQEKSWISPGIVRVVLGGPGFDAYNDNAFTDKYVKIFFADPAH
CCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC
GLEPPYDLAALRAEHPEKLPATRTYTVRWADPDTRRLAIDFIVHGDEGIAGPWAAGAEVD
CCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
DLLVLSGAGGAYRPDPAADWHLLAGDETAIPSTTSALAAMPAAATGSVLLLVDSAKYEIP
EEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEC
IPRPDGVNLRWLHRETAVADVDPLVDALRELPWPTGTPQVFVHGERGTVKAARRLLTVDR
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCC
GVPREQLSISAYWAAGRTEDRFQAEKREPIGQI
CCCHHHEEEEEEEECCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATTGRTRPVRTQAVLAVQEKSWISPGIVRVVLGGPGFDAYNDNAFTDKYVKIFFADPAH
CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC
GLEPPYDLAALRAEHPEKLPATRTYTVRWADPDTRRLAIDFIVHGDEGIAGPWAAGAEVD
CCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
DLLVLSGAGGAYRPDPAADWHLLAGDETAIPSTTSALAAMPAAATGSVLLLVDSAKYEIP
EEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEC
IPRPDGVNLRWLHRETAVADVDPLVDALRELPWPTGTPQVFVHGERGTVKAARRLLTVDR
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCC
GVPREQLSISAYWAAGRTEDRFQAEKREPIGQI
CCCHHHEEEEEEEECCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]