| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is paaK [H]
Identifier: 158315410
GI number: 158315410
Start: 4282696
End: 4284006
Strand: Reverse
Name: paaK [H]
Synonym: Franean1_3613
Alternate gene names: 158315410
Gene position: 4284006-4282696 (Counterclockwise)
Preceding gene: 158315417
Following gene: 158315409
Centisome position: 47.7
GC content: 72.77
Gene sequence:
>1311_bases ATGCCGTGGACGCGTCCTGACCCAAACAGCTGGTCCAGCCCGGACGAACTTGGCGCCCTGCAGCGCGCCGAACTGCCCCG AGTCCTGGCGACCGCGCTGCGCTCGCCTTTCTACGCGGCCCGGTACGCCGGCGGCGATCCGCCGCGGACCGCAGCCGACT TCGCGGGCCTCCCCCTCACCACCAAGCAGGACCTGCGCGACGCCTACCCGTTCGGCATGCTCGCCGTTCCGCGTGCGGAG CTCGCGACCTACCACGAGTCGAGCGGCACGGCCGGCGACCCGACCGCGTCCTACTACACCGAGAAGGACTGGGTCGACCT GGCGGAACGGTTCGCCCGCAAGTGGATCGGCATCAGCCCGTCGGACACCCTGCTGGTCCGCACCCCGTACGCGCTGGTCA TCACCGGCCATCTCGCGCACGCCGCGGGCCGGCTGTGCGGCGCCACGGTCGTCCCGGGCGACCTGCGGTCGCTGGCCACC CCGTTGTCGCGCATCGTGCGGGTGCTGCACGACCTGGAGGTCACCCTCACCTGGTGCAACCCGACCGAGGCGGTGATGCT CGCCGCCGCCGCCCGGGCCGCGGGGCTGCGCCCGGAACGGGACTTCCCCGCGCTGCGCGCGATGTTCGTCGCCGCCGAGC CGCTCACAGACGTCCGCAGGCACCGCATCAGCGAGATCTGGGGCGGCGTCCCGGTGATCGAGGAGTACGGCTCGACCGAG ACCGGCACGATAGCCGGCCAGTGCCCGTCGGGCGCGATGCACCTGTGGGCCGACCGGGCAATCTTCGAGGTCTGGTCGCC GGAGACGGGGACGCTCGGCCCGACTGGGCGCGGCCAGCTCGTGGTGACGCCGCTGTTCCGCGAGGCCATGCCGCTGCTGC GGTACAACCTCGCCGACGAGGTAGAGGTCTCCGACGCGCCCTGTGTGTGCGGCTGGCAGCTGCCGACGGTGCGGGTGTTC GGCCGGGCGGCGTTCGCGTACCCCGTCGGCTCCGCCGCCGTCACCCAGCAGCAGCTCGAGGAGCTCGTCTTCAGGCTTCC CGCGGCCTGCGACGTGGTCTTCTGGCGCGCGGTCGCCGAACCGGCGGTGCTGCGGGTGGAGATCGAGGTCGCTGACGAGG CCCGCGAACGCGCGGTCAAGGAGCTGCGCGCGGCCATCGACCGGGAACTCGGCGTCCCGCACCAGGTCACCGGCCTGTCT CCGGGCACGATCGTCCCGGCCGAGGCGCTGCGGGCGCAGCGGGACATCCTCAAGGCCCGCTACCTGTTCGGGCCGGGCGA GGACTGGAACAAGGCGGTCATGTACCAGTGA
Upstream 100 bases:
>100_bases TGGCTACTCACGATCCGGCGCACGTACCGGTGCTGTGCTGGACGTCGCCGGTCCACCTGACACGCACGCCGCAACGAACC TCACCCGAACGGGAGTCCCG
Downstream 100 bases:
>100_bases CCGCCGCCGACACACCCCCTCCGGTCCGCCCCGCCGGCACACTGCCGACGCTCGTCGTCGGTGGCGGCATCGGCGGGCTG TCCGCTGCCCTCGCCGTGGC
Product: coenzyme F390 synthetase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MPWTRPDPNSWSSPDELGALQRAELPRVLATALRSPFYAARYAGGDPPRTAADFAGLPLTTKQDLRDAYPFGMLAVPRAE LATYHESSGTAGDPTASYYTEKDWVDLAERFARKWIGISPSDTLLVRTPYALVITGHLAHAAGRLCGATVVPGDLRSLAT PLSRIVRVLHDLEVTLTWCNPTEAVMLAAAARAAGLRPERDFPALRAMFVAAEPLTDVRRHRISEIWGGVPVIEEYGSTE TGTIAGQCPSGAMHLWADRAIFEVWSPETGTLGPTGRGQLVVTPLFREAMPLLRYNLADEVEVSDAPCVCGWQLPTVRVF GRAAFAYPVGSAAVTQQQLEELVFRLPAACDVVFWRAVAEPAVLRVEIEVADEARERAVKELRAAIDRELGVPHQVTGLS PGTIVPAEALRAQRDILKARYLFGPGEDWNKAVMYQ
Sequences:
>Translated_436_residues MPWTRPDPNSWSSPDELGALQRAELPRVLATALRSPFYAARYAGGDPPRTAADFAGLPLTTKQDLRDAYPFGMLAVPRAE LATYHESSGTAGDPTASYYTEKDWVDLAERFARKWIGISPSDTLLVRTPYALVITGHLAHAAGRLCGATVVPGDLRSLAT PLSRIVRVLHDLEVTLTWCNPTEAVMLAAAARAAGLRPERDFPALRAMFVAAEPLTDVRRHRISEIWGGVPVIEEYGSTE TGTIAGQCPSGAMHLWADRAIFEVWSPETGTLGPTGRGQLVVTPLFREAMPLLRYNLADEVEVSDAPCVCGWQLPTVRVF GRAAFAYPVGSAAVTQQQLEELVFRLPAACDVVFWRAVAEPAVLRVEIEVADEARERAVKELRAAIDRELGVPHQVTGLS PGTIVPAEALRAQRDILKARYLFGPGEDWNKAVMYQ >Mature_435_residues PWTRPDPNSWSSPDELGALQRAELPRVLATALRSPFYAARYAGGDPPRTAADFAGLPLTTKQDLRDAYPFGMLAVPRAEL ATYHESSGTAGDPTASYYTEKDWVDLAERFARKWIGISPSDTLLVRTPYALVITGHLAHAAGRLCGATVVPGDLRSLATP LSRIVRVLHDLEVTLTWCNPTEAVMLAAAARAAGLRPERDFPALRAMFVAAEPLTDVRRHRISEIWGGVPVIEEYGSTET GTIAGQCPSGAMHLWADRAIFEVWSPETGTLGPTGRGQLVVTPLFREAMPLLRYNLADEVEVSDAPCVCGWQLPTVRVFG RAAFAYPVGSAAVTQQQLEELVFRLPAACDVVFWRAVAEPAVLRVEIEVADEARERAVKELRAAIDRELGVPHQVTGLSP GTIVPAEALRAQRDILKARYLFGPGEDWNKAVMYQ
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=434, Percent_Identity=29.4930875576037, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 47603; Mature: 47472
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWTRPDPNSWSSPDELGALQRAELPRVLATALRSPFYAARYAGGDPPRTAADFAGLPLT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHCCCCCC TKQDLRDAYPFGMLAVPRAELATYHESSGTAGDPTASYYTEKDWVDLAERFARKWIGISP CHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC SDTLLVRTPYALVITGHLAHAAGRLCGATVVPGDLRSLATPLSRIVRVLHDLEVTLTWCN CCEEEEECCEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECC PTEAVMLAAAARAAGLRPERDFPALRAMFVAAEPLTDVRRHRISEIWGGVPVIEEYGSTE CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCC TGTIAGQCPSGAMHLWADRAIFEVWSPETGTLGPTGRGQLVVTPLFREAMPLLRYNLADE CCEEECCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCC VEVSDAPCVCGWQLPTVRVFGRAAFAYPVGSAAVTQQQLEELVFRLPAACDVVFWRAVAE CCCCCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PAVLRVEIEVADEARERAVKELRAAIDRELGVPHQVTGLSPGTIVPAEALRAQRDILKAR CEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHH YLFGPGEDWNKAVMYQ HHCCCCCCCCCCCCCC >Mature Secondary Structure PWTRPDPNSWSSPDELGALQRAELPRVLATALRSPFYAARYAGGDPPRTAADFAGLPLT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHCCCCCC TKQDLRDAYPFGMLAVPRAELATYHESSGTAGDPTASYYTEKDWVDLAERFARKWIGISP CHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC SDTLLVRTPYALVITGHLAHAAGRLCGATVVPGDLRSLATPLSRIVRVLHDLEVTLTWCN CCEEEEECCEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECC PTEAVMLAAAARAAGLRPERDFPALRAMFVAAEPLTDVRRHRISEIWGGVPVIEEYGSTE CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCC TGTIAGQCPSGAMHLWADRAIFEVWSPETGTLGPTGRGQLVVTPLFREAMPLLRYNLADE CCEEECCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCC VEVSDAPCVCGWQLPTVRVFGRAAFAYPVGSAAVTQQQLEELVFRLPAACDVVFWRAVAE CCCCCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PAVLRVEIEVADEARERAVKELRAAIDRELGVPHQVTGLSPGTIVPAEALRAQRDILKAR CEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHH YLFGPGEDWNKAVMYQ HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]