| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315373
Identifier: 158315373
GI number: 158315373
Start: 4236926
End: 4237534
Strand: Reverse
Name: 158315373
Synonym: Franean1_3575
Alternate gene names: NA
Gene position: 4237534-4236926 (Counterclockwise)
Preceding gene: 158315374
Following gene: 158315372
Centisome position: 47.18
GC content: 69.95
Gene sequence:
>609_bases GTGGTGGCCCTCTTGCTCGGCACGCGGCACCTGGCCCTGCACGGCGGGCCGGTCGACGTACTGAAATCAGCACGACGTCT ACTCATCTTCTCCAGCATGGTAACGCTGGCCCTGAATGTCGCGGAACCCCTGATCGAACGAGACTACGGAAAAGCCGCGT TCGACGCCGTAGGCCCGCTTCTCCTGATCGGATGGAGCGAGGTCGGCCCCGGACTTCTCCAGGCCATTCGGACAGCTGGC CCGCGCGCAGAGCCGGCGCCTGCCGCGCGAGGCCAGGCCCGCCTCGGAGAACCTACGAAGCCCCCGGAGCAGGTCAGCCC GCCGGCACCGTCAGCCGAGCCGCTGCACGATCACCGGACGCCGCCGCGGACGAACCCCCACGTGGACCGACGGTTGTCCG CCCACCAGGACCTCCTGCACCGAGCCCGCACCGAAGACGCCCTCCACTGGCAGCACCACCACCGGCCGATCTCCGCCGAC ACCCTCCGCAAACGCCTCCACATCGGCACCACCACCGCACGCAGCCTCGTCACCCAGCTACGCACCGACACCCACGCCCG CCTCGACACCCCGCACCACGAGCCCGATCCCCTCCCGACCCCACCATGA
Upstream 100 bases:
>100_bases GGAAGGCGCTGTCCCAGGCCAGAACACATGATCCAGGTCGGCAGCCGGGAACCATGAACTGAAGGGTTATTTCTCAGTCG CGCCGGCCGTCGACCTGTCC
Downstream 100 bases:
>100_bases TGAGAAGGGCGAGGCCGGTCACGAACTGACTGGCCCCGCCACTTCGGCCTGACCGACTTGCTCACCCTCCAGCGGCATGC GCTCCGTGTGTGACATGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MVALLLGTRHLALHGGPVDVLKSARRLLIFSSMVTLALNVAEPLIERDYGKAAFDAVGPLLLIGWSEVGPGLLQAIRTAG PRAEPAPAARGQARLGEPTKPPEQVSPPAPSAEPLHDHRTPPRTNPHVDRRLSAHQDLLHRARTEDALHWQHHHRPISAD TLRKRLHIGTTTARSLVTQLRTDTHARLDTPHHEPDPLPTPP
Sequences:
>Translated_202_residues MVALLLGTRHLALHGGPVDVLKSARRLLIFSSMVTLALNVAEPLIERDYGKAAFDAVGPLLLIGWSEVGPGLLQAIRTAG PRAEPAPAARGQARLGEPTKPPEQVSPPAPSAEPLHDHRTPPRTNPHVDRRLSAHQDLLHRARTEDALHWQHHHRPISAD TLRKRLHIGTTTARSLVTQLRTDTHARLDTPHHEPDPLPTPP >Mature_202_residues MVALLLGTRHLALHGGPVDVLKSARRLLIFSSMVTLALNVAEPLIERDYGKAAFDAVGPLLLIGWSEVGPGLLQAIRTAG PRAEPAPAARGQARLGEPTKPPEQVSPPAPSAEPLHDHRTPPRTNPHVDRRLSAHQDLLHRARTEDALHWQHHHRPISAD TLRKRLHIGTTTARSLVTQLRTDTHARLDTPHHEPDPLPTPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22120; Mature: 22120
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALLLGTRHLALHGGPVDVLKSARRLLIFSSMVTLALNVAEPLIERDYGKAAFDAVGPL CEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCE LLIGWSEVGPGLLQAIRTAGPRAEPAPAARGQARLGEPTKPPEQVSPPAPSAEPLHDHRT EEECCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPRTNPHVDRRLSAHQDLLHRARTEDALHWQHHHRPISADTLRKRLHIGTTTARSLVTQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHH RTDTHARLDTPHHEPDPLPTPP HHHCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MVALLLGTRHLALHGGPVDVLKSARRLLIFSSMVTLALNVAEPLIERDYGKAAFDAVGPL CEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCE LLIGWSEVGPGLLQAIRTAGPRAEPAPAARGQARLGEPTKPPEQVSPPAPSAEPLHDHRT EEECCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPRTNPHVDRRLSAHQDLLHRARTEDALHWQHHHRPISADTLRKRLHIGTTTARSLVTQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHH RTDTHARLDTPHHEPDPLPTPP HHHCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA