| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is glxR [C]
Identifier: 158315361
GI number: 158315361
Start: 4227024
End: 4227893
Strand: Reverse
Name: glxR [C]
Synonym: Franean1_3563
Alternate gene names: 158315361
Gene position: 4227893-4227024 (Counterclockwise)
Preceding gene: 158315365
Following gene: 158315360
Centisome position: 47.07
GC content: 68.39
Gene sequence:
>870_bases ATGACGACCCGTACGACCTTCCTGGGCCTGGGCGCGATGGGCAGCGCGCTCGCCGCCGCGGCTCTCGACGCCGGCCGACC ATCCGTGGTGTGGAACCGCACTCCAGGCAGAGCACAGGCCCTGGGCGAGCGTGGCGCCACCGTCGCCGAGACCGTCGAGG AGGCGATCACCGGCGACGGGGTGGTCGTCGTGTGCCTGTTCGACCATCAGTCGGTGCACACGGTGGTCGATCCTGTCGCC GCACGTCTGGCCGGGCGTACCGTGATCAATCTGACGACGACGACACCGAACCAGTCTCGCGAGCTTGCGACATGGGCGGC AGAGTACGGCATCACCTACCTCGACGGCGCGATCATGGCCGTACCCGCGATGATCGGCCGTCCGGGTACGGCGATCTTCT ACAGCGGCCCCGAGGCCGCCTTCGAGGAGAACCGGGAACTGCTCGATCTGTGGGGGCAGAGCGACTACTTCGGGACCGAC CCCGGTATCGCCTCGCTCCGCGACATGGCGATGCTCGTCGGGATGTACACGATGTTCGCTGGCTTTCTGCACGGCGCGGC GATGGTCGGTGTCGAAGGCGTGTCGGCAGCCGAGTTCGCCCGACGGCAGACGCCTTTCCTCGCCGCCATGACCGGCCAGC TGGCCGGCCTCGCCGCGACAGTAGACGCCGAAGACTACGCCGGGGCGGGCCAGCAGAGCCTTGAGTTCACTGAAGCCGCG CTGGACTCGCTGGTGACGGCCAGCCTCGACCAGGGCGTCAATGCCGAGGTGCTGCGGCCCGTACTTGACATCGTGCGCCG GCAGATCGCCGCCGGGTACGGCAGGCAGGGCACCGCCCGCATCTTCGAAGAGCTCAGGAAGTCCCGATGA
Upstream 100 bases:
>100_bases GTATTGAACAAAATTGTAGGTACTTGCCGGAGAGGAAGGATCAGGCGGAGGGTCGGGACGGCACGCCAGTCAGACCACCA AGCGGAGCAAGGGACAATCC
Downstream 100 bases:
>100_bases GCGGCGAGGGCGGTCTGTCCTCCGTGACGATCGTCGGCCTTGGCCCGATGGGCCGAGCGACGGCCGCGGCCCTGCTGCGG TCCGGCCATCCGGTGACGGT
Product: NAD-binding 6-phosphogluconate dehydrogenase
Products: (R)-Glycerate; Nicotinamide adenine dinucleotide [C]
Alternate protein names: NAD-Dependent Glycerol-3-Phosphate Dehydrogenase; Oxidoreductase; 6-Phosphogluconate Dehydrogenase; Beta-Hydroxyacid Dehydrogenase; Oxidoreductase Protein; Pyrroline-5-Carboxylate Reductase; 3-Hydroxyacid Dehydrogenase; 3-Hydroxyisobutyrate Dehydrogenase; Membrane-Bound Dehydrogenase; 2-Hydroxy-3-Oxopropionate Reductase
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTTRTTFLGLGAMGSALAAAALDAGRPSVVWNRTPGRAQALGERGATVAETVEEAITGDGVVVVCLFDHQSVHTVVDPVA ARLAGRTVINLTTTTPNQSRELATWAAEYGITYLDGAIMAVPAMIGRPGTAIFYSGPEAAFEENRELLDLWGQSDYFGTD PGIASLRDMAMLVGMYTMFAGFLHGAAMVGVEGVSAAEFARRQTPFLAAMTGQLAGLAATVDAEDYAGAGQQSLEFTEAA LDSLVTASLDQGVNAEVLRPVLDIVRRQIAAGYGRQGTARIFEELRKSR
Sequences:
>Translated_289_residues MTTRTTFLGLGAMGSALAAAALDAGRPSVVWNRTPGRAQALGERGATVAETVEEAITGDGVVVVCLFDHQSVHTVVDPVA ARLAGRTVINLTTTTPNQSRELATWAAEYGITYLDGAIMAVPAMIGRPGTAIFYSGPEAAFEENRELLDLWGQSDYFGTD PGIASLRDMAMLVGMYTMFAGFLHGAAMVGVEGVSAAEFARRQTPFLAAMTGQLAGLAATVDAEDYAGAGQQSLEFTEAA LDSLVTASLDQGVNAEVLRPVLDIVRRQIAAGYGRQGTARIFEELRKSR >Mature_288_residues TTRTTFLGLGAMGSALAAAALDAGRPSVVWNRTPGRAQALGERGATVAETVEEAITGDGVVVVCLFDHQSVHTVVDPVAA RLAGRTVINLTTTTPNQSRELATWAAEYGITYLDGAIMAVPAMIGRPGTAIFYSGPEAAFEENRELLDLWGQSDYFGTDP GIASLRDMAMLVGMYTMFAGFLHGAAMVGVEGVSAAEFARRQTPFLAAMTGQLAGLAATVDAEDYAGAGQQSLEFTEAAL DSLVTASLDQGVNAEVLRPVLDIVRRQIAAGYGRQGTARIFEELRKSR
Specific function: Glyoxylate catabolism. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.1.1.60 [C]
Molecular weight: Translated: 30438; Mature: 30307
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRTTFLGLGAMGSALAAAALDAGRPSVVWNRTPGRAQALGERGATVAETVEEAITGDG CCCCCCEEECCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHHHCCCC VVVVCLFDHQSVHTVVDPVAARLAGRTVINLTTTTPNQSRELATWAAEYGITYLDGAIMA EEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHH VPAMIGRPGTAIFYSGPEAAFEENRELLDLWGQSDYFGTDPGIASLRDMAMLVGMYTMFA HHHHHCCCCCEEEECCCHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GFLHGAAMVGVEGVSAAEFARRQTPFLAAMTGQLAGLAATVDAEDYAGAGQQSLEFTEAA HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCHHHCCCCCHHHHHHHHH LDSLVTASLDQGVNAEVLRPVLDIVRRQIAAGYGRQGTARIFEELRKSR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TTRTTFLGLGAMGSALAAAALDAGRPSVVWNRTPGRAQALGERGATVAETVEEAITGDG CCCCCEEECCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHHHCCCC VVVVCLFDHQSVHTVVDPVAARLAGRTVINLTTTTPNQSRELATWAAEYGITYLDGAIMA EEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHH VPAMIGRPGTAIFYSGPEAAFEENRELLDLWGQSDYFGTDPGIASLRDMAMLVGMYTMFA HHHHHCCCCCEEEECCCHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GFLHGAAMVGVEGVSAAEFARRQTPFLAAMTGQLAGLAATVDAEDYAGAGQQSLEFTEAA HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCHHHCCCCCHHHHHHHHH LDSLVTASLDQGVNAEVLRPVLDIVRRQIAAGYGRQGTARIFEELRKSR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-Hydroxy-3-oxopropanoate; H+; Nicotinamide adenine dinucleotide - reduced [C]
Specific reaction: 2-Hydroxy-3-oxopropanoate + H+ + Nicotinamide adenine dinucleotide - reduced --> (R)-Glycerate + Nicotinamide adenine dinucleotide [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA