| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158315345
Identifier: 158315345
GI number: 158315345
Start: 4206222
End: 4206581
Strand: Reverse
Name: 158315345
Synonym: Franean1_3546
Alternate gene names: NA
Gene position: 4206581-4206222 (Counterclockwise)
Preceding gene: 158315347
Following gene: 158315339
Centisome position: 46.83
GC content: 65.0
Gene sequence:
>360_bases GTGTGCGGGCCGCGGCTGCGGACCTACCAGGGTGACCAGGGTGACCCGAAGACGCTGCGAAAGGTGGCCGGCGAGATCGG GCCGCTCGACATCGTCATCGAGGACACCGAGAAGTCCTACTGGCCGGGATTCGGCGGAGCACTGCCCGGCGGGACGGGAA CCCGGACCGTCATGACCCGACTCAAGGAGCTTCTCGACGGCCTGCACTACCCGGAGTACGAGGACACGTCGGTGTACCAG CCGTCCGTCACCGACCGGGGAGTCTCGGCCGTGCATTTTTACCGGAACATAGTTTTCATCGAGAAAGGCCTCAACACCGA GGTCGGACCACCGGAATGGACGCCGCGTGTACCGGTGTGA
Upstream 100 bases:
>100_bases GGCCGCTGGTCGACGGGCCGGTGCGGCTGCTGGAAATCGGGATCGAGGGTACATCCGGGATATCGCCGGCGACGACGGGG ACAGCCGCGGCCTGGCGTCC
Downstream 100 bases:
>100_bases CCGGCAGCGGCACACGAGGGAGACGCCGCGGGTCGGGATCACGCCACACCTGGCGCGGTCAGGACGTCCCGGCGGTGGTA CGGACGGCGCCGGCGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MCGPRLRTYQGDQGDPKTLRKVAGEIGPLDIVIEDTEKSYWPGFGGALPGGTGTRTVMTRLKELLDGLHYPEYEDTSVYQ PSVTDRGVSAVHFYRNIVFIEKGLNTEVGPPEWTPRVPV
Sequences:
>Translated_119_residues MCGPRLRTYQGDQGDPKTLRKVAGEIGPLDIVIEDTEKSYWPGFGGALPGGTGTRTVMTRLKELLDGLHYPEYEDTSVYQ PSVTDRGVSAVHFYRNIVFIEKGLNTEVGPPEWTPRVPV >Mature_119_residues MCGPRLRTYQGDQGDPKTLRKVAGEIGPLDIVIEDTEKSYWPGFGGALPGGTGTRTVMTRLKELLDGLHYPEYEDTSVYQ PSVTDRGVSAVHFYRNIVFIEKGLNTEVGPPEWTPRVPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13194; Mature: 13194
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGPRLRTYQGDQGDPKTLRKVAGEIGPLDIVIEDTEKSYWPGFGGALPGGTGTRTVMTR CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH LKELLDGLHYPEYEDTSVYQPSVTDRGVSAVHFYRNIVFIEKGLNTEVGPPEWTPRVPV HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCGPRLRTYQGDQGDPKTLRKVAGEIGPLDIVIEDTEKSYWPGFGGALPGGTGTRTVMTR CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH LKELLDGLHYPEYEDTSVYQPSVTDRGVSAVHFYRNIVFIEKGLNTEVGPPEWTPRVPV HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA