| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is CYP105A1 [H]
Identifier: 158315270
GI number: 158315270
Start: 4099763
End: 4100977
Strand: Direct
Name: CYP105A1 [H]
Synonym: Franean1_3470
Alternate gene names: 158315270
Gene position: 4099763-4100977 (Clockwise)
Preceding gene: 158315269
Following gene: 158315282
Centisome position: 45.64
GC content: 73.09
Gene sequence:
>1215_bases ATGAGCAGCAACCAAGCGGTCGTGGCGACTCCGCCCGCCTTTCCCATGGACCGTGGATGTCCTTACCACCCGCCGGCCGG GTACGCGCAGCTCCAGCAGGACGGGCCGATCACCCGGGCGACGCTGTTCGACGGCCGGGAGGTGTGGGTGGTCACCGGCT ACGAGGAGGCCCGCCGGCTCCTCGTCGACCCGCGGCTGTCCTCGGACCGTTCCCGGCCCGACTTCCCGGTGCTGGTGCCG CGGATGGCCGCGGCCAAGCTCGTCGCGCTCGTCGGGATGGACCCGCCGGAGCACGACATCCAGCGCCGCATGCTGATCGG CAGCTTCACCGTGCGGCGGGCGAACGCGCTGCGGCCGGACATCGAACGGATCGTCGGCGGGCGCGTCGACGCCCTGCTCG CGCACGAGCCGGGCGAGGTCGTCGACCTCGTGCCCGAGTTCGCGTTGCCGATCCCGTCCACCGTGATCTGCGAGCTGCTC GGCGTGCCCTACGGCGACCACGAGTTCTTCGAGGAGCAGACCCGGCGGATGGTGATCGCGACCAGCACGGCGGCCGAGGC CGCGGCCGCGTCGCGGGCCCTGGTCGACTACTTCGACGAGCTGATCGCCAGGAAGCGGGAGCGGCCCGGGGAGGGGCTGC TCGACGAGCTGATCGCCGAGCGGCTCGTCACCGGCCAGATCGGGCAGGACGATCTCGCGTCGATGGCGATGTTCCTGCTC GTCGCCGGGCACGAGACGACCGCGAACATGCTCGGGCTGAGCGTGCTGGCGCTGCTGGAACACCCGGACCAGCGGGCCCG GCTGATCGAGGACCCGGCCGGGCGGGCCGCCGGCGCGACCGAGGAGCTGCTGCGCTTCCTGTCGGTGGCCGACGAGATCC AGCGGATCGCCGCCGCCGACATCGAGGTCGCCGGGGTCGTCATCCGGGCCGGTGACGGGGTGTACCTGCCGACGGCGGCG GCGAACCGGACCGCGGCGACGTTCCCCGACCCCGACGCCCTCGACATCGGCCGGGTCCCGCGGGGACATCTCGCCTTCGG CTACGGCATCCACCAGTGCATCGGGCAGAACCTGGCCCGGGTGGAGCTGGAGATCGGCCTGCGCGAGCTGTTCGGCCGCA TCCCGACGCTGCGGCTGGCCGAGCCGGTCGAGGCGCTCGGGGCGAAGCCCGGCGGCTCGGTGCAGGGCGTCTACCGGCTG CCCGTCGTCTGGTAG
Upstream 100 bases:
>100_bases GTGGCCGTCCACCGGTGGCTTTAGCGCTGATTAACCGGGGCTACCCATGATCATGCCCCGCGTGGCGTGAGGGCCGCGCC TGGACGTCAGGGGCCAAGTC
Downstream 100 bases:
>100_bases CTCCTGATCGGCCCCGGCCTTCGAAGGCCGGGGCCGATCACGCGTCCGCGGGCGGGGCAGGTCAGGCGACCAGGCTCTCC TCGAGGAACCGGACGACCGC
Product: cytochrome P450
Products: NA
Alternate protein names: CYP105A1; Cytochrome P450-CVA1 [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSSNQAVVATPPAFPMDRGCPYHPPAGYAQLQQDGPITRATLFDGREVWVVTGYEEARRLLVDPRLSSDRSRPDFPVLVP RMAAAKLVALVGMDPPEHDIQRRMLIGSFTVRRANALRPDIERIVGGRVDALLAHEPGEVVDLVPEFALPIPSTVICELL GVPYGDHEFFEEQTRRMVIATSTAAEAAAASRALVDYFDELIARKRERPGEGLLDELIAERLVTGQIGQDDLASMAMFLL VAGHETTANMLGLSVLALLEHPDQRARLIEDPAGRAAGATEELLRFLSVADEIQRIAAADIEVAGVVIRAGDGVYLPTAA ANRTAATFPDPDALDIGRVPRGHLAFGYGIHQCIGQNLARVELEIGLRELFGRIPTLRLAEPVEALGAKPGGSVQGVYRL PVVW
Sequences:
>Translated_404_residues MSSNQAVVATPPAFPMDRGCPYHPPAGYAQLQQDGPITRATLFDGREVWVVTGYEEARRLLVDPRLSSDRSRPDFPVLVP RMAAAKLVALVGMDPPEHDIQRRMLIGSFTVRRANALRPDIERIVGGRVDALLAHEPGEVVDLVPEFALPIPSTVICELL GVPYGDHEFFEEQTRRMVIATSTAAEAAAASRALVDYFDELIARKRERPGEGLLDELIAERLVTGQIGQDDLASMAMFLL VAGHETTANMLGLSVLALLEHPDQRARLIEDPAGRAAGATEELLRFLSVADEIQRIAAADIEVAGVVIRAGDGVYLPTAA ANRTAATFPDPDALDIGRVPRGHLAFGYGIHQCIGQNLARVELEIGLRELFGRIPTLRLAEPVEALGAKPGGSVQGVYRL PVVW >Mature_403_residues SSNQAVVATPPAFPMDRGCPYHPPAGYAQLQQDGPITRATLFDGREVWVVTGYEEARRLLVDPRLSSDRSRPDFPVLVPR MAAAKLVALVGMDPPEHDIQRRMLIGSFTVRRANALRPDIERIVGGRVDALLAHEPGEVVDLVPEFALPIPSTVICELLG VPYGDHEFFEEQTRRMVIATSTAAEAAAASRALVDYFDELIARKRERPGEGLLDELIAERLVTGQIGQDDLASMAMFLLV AGHETTANMLGLSVLALLEHPDQRARLIEDPAGRAAGATEELLRFLSVADEIQRIAAADIEVAGVVIRAGDGVYLPTAAA NRTAATFPDPDALDIGRVPRGHLAFGYGIHQCIGQNLARVELEIGLRELFGRIPTLRLAEPVEALGAKPGGSVQGVYRLP VVW
Specific function: Metabolism of a number of sulfonylurea herbicides [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 43757; Mature: 43626
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNQAVVATPPAFPMDRGCPYHPPAGYAQLQQDGPITRATLFDGREVWVVTGYEEARRL CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCEEEEEECHHHHHHH LVDPRLSSDRSRPDFPVLVPRMAAAKLVALVGMDPPEHDIQRRMLIGSFTVRRANALRPD CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH IERIVGGRVDALLAHEPGEVVDLVPEFALPIPSTVICELLGVPYGDHEFFEEQTRRMVIA HHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHCEEEEE TSTAAEAAAASRALVDYFDELIARKRERPGEGLLDELIAERLVTGQIGQDDLASMAMFLL ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH VAGHETTANMLGLSVLALLEHPDQRARLIEDPAGRAAGATEELLRFLSVADEIQRIAAAD HCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC IEVAGVVIRAGDGVYLPTAAANRTAATFPDPDALDIGRVPRGHLAFGYGIHQCIGQNLAR EEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHE VELEIGLRELFGRIPTLRLAEPVEALGAKPGGSVQGVYRLPVVW EHHHHHHHHHHCCCCCCCHHCHHHHHCCCCCCCCCEEEECCCCC >Mature Secondary Structure SSNQAVVATPPAFPMDRGCPYHPPAGYAQLQQDGPITRATLFDGREVWVVTGYEEARRL CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCEEEEEECHHHHHHH LVDPRLSSDRSRPDFPVLVPRMAAAKLVALVGMDPPEHDIQRRMLIGSFTVRRANALRPD CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH IERIVGGRVDALLAHEPGEVVDLVPEFALPIPSTVICELLGVPYGDHEFFEEQTRRMVIA HHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHCEEEEE TSTAAEAAAASRALVDYFDELIARKRERPGEGLLDELIAERLVTGQIGQDDLASMAMFLL ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH VAGHETTANMLGLSVLALLEHPDQRARLIEDPAGRAAGATEELLRFLSVADEIQRIAAAD HCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC IEVAGVVIRAGDGVYLPTAAANRTAATFPDPDALDIGRVPRGHLAFGYGIHQCIGQNLAR EEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHE VELEIGLRELFGRIPTLRLAEPVEALGAKPGGSVQGVYRLPVVW EHHHHHHHHHHCCCCCCCHHCHHHHHCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2345149 [H]