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The map label for this gene is ycfQ [C]

Identifier: 158315266

GI number: 158315266

Start: 4096970

End: 4097707

Strand: Direct

Name: ycfQ [C]

Synonym: Franean1_3466

Alternate gene names: 158315266

Gene position: 4096970-4097707 (Clockwise)

Preceding gene: 158315258

Following gene: 158315268

Centisome position: 45.61

GC content: 73.98

Gene sequence:

>738_bases
GTGCGCAGTGCGAAGACCGCCGGCTCGGCTGGAGTCGCCGGCTCGGCTGGAGCGGCGGGGTCGGCTGGAGCGGCGGGCTC
GGCTGGAACTGTCGGCACACGGGGCAGGATCGACAAGCGGCAGGCGATCCTGGACGCCGCCTTCACCGTCTTCGCCCGCG
AGGGCTACTCGCAGGCGAGCATCGACATGATCGCCTCCGAGGCCGGCGTGGCGAAGCCGACGATCTACAACCATCTCGGC
GGCAAGGAGAACCTGTTCCGGCACGCGATGGCGGCCGCCGCGGACCGGACCACGGCCAAGACCCTCGCCATCGTCGGCCG
GCTCACCGTCGACGTGGCCGACCTGCCCGTCGCGTTCACCGACGTCGGCCGCGCGCTGCTGGAGTGCTACTGCGCCGCCG
ACTCCTGGGCGCTGCGCCGCCTGCTGCACGCCGAGATCGTCCGGTTCCCGGACCTGTTCGACATGATCGGCGCCAACGGG
CCGAACCAGGTGGGAGAGGCCCTCGCCGACCGGCTGGCCCGGCTCGCCCTCGCCGGCCGGCTGCGGCTGACCGATCCGGT
GGAGGCGGCCGAGCACTTCCTCGCGCTGCTCACCGGCCCGGTCGCGCACCGCTCCGCGCTGGGTACCCGCACGTTCGACG
ACACCCAGATCCAGCACACCGCGCGGGCCGCGACCGCGACCTTCCTGCGCGCCTTCGCCGCCACGGGCCCGGCGGCGAAG
GCCCCGGCGAGCGAGTAG

Upstream 100 bases:

>100_bases
AAATGTCGAGGTTGGAGGGCTGTGGCCGCCCCGGGGCCCGGCCTTCCCCAGCCCGTCGGGACCGGTCGGCCCGCCGGTGT
CGTCCGCGTAGGCTGGGTCG

Downstream 100 bases:

>100_bases
CGGCTCACCGGGCCGCGGGCAGGGCCGGCGGCGGCAGCGCGGCCGGGGCCGACCCCGGCACCGGGAGACGGGGCAGCACC
TCGGCGGCGAACCGCTCCCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRSAKTAGSAGVAGSAGAAGSAGAAGSAGTVGTRGRIDKRQAILDAAFTVFAREGYSQASIDMIASEAGVAKPTIYNHLG
GKENLFRHAMAAAADRTTAKTLAIVGRLTVDVADLPVAFTDVGRALLECYCAADSWALRRLLHAEIVRFPDLFDMIGANG
PNQVGEALADRLARLALAGRLRLTDPVEAAEHFLALLTGPVAHRSALGTRTFDDTQIQHTARAATATFLRAFAATGPAAK
APASE

Sequences:

>Translated_245_residues
MRSAKTAGSAGVAGSAGAAGSAGAAGSAGTVGTRGRIDKRQAILDAAFTVFAREGYSQASIDMIASEAGVAKPTIYNHLG
GKENLFRHAMAAAADRTTAKTLAIVGRLTVDVADLPVAFTDVGRALLECYCAADSWALRRLLHAEIVRFPDLFDMIGANG
PNQVGEALADRLARLALAGRLRLTDPVEAAEHFLALLTGPVAHRSALGTRTFDDTQIQHTARAATATFLRAFAATGPAAK
APASE
>Mature_245_residues
MRSAKTAGSAGVAGSAGAAGSAGAAGSAGTVGTRGRIDKRQAILDAAFTVFAREGYSQASIDMIASEAGVAKPTIYNHLG
GKENLFRHAMAAAADRTTAKTLAIVGRLTVDVADLPVAFTDVGRALLECYCAADSWALRRLLHAEIVRFPDLFDMIGANG
PNQVGEALADRLARLALAGRLRLTDPVEAAEHFLALLTGPVAHRSALGTRTFDDTQIQHTARAATATFLRAFAATGPAAK
APASE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25270; Mature: 25270

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSAKTAGSAGVAGSAGAAGSAGAAGSAGTVGTRGRIDKRQAILDAAFTVFAREGYSQAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
IDMIASEAGVAKPTIYNHLGGKENLFRHAMAAAADRTTAKTLAIVGRLTVDVADLPVAFT
HHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCHHHH
DVGRALLECYCAADSWALRRLLHAEIVRFPDLFDMIGANGPNQVGEALADRLARLALAGR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
LRLTDPVEAAEHFLALLTGPVAHRSALGTRTFDDTQIQHTARAATATFLRAFAATGPAAK
CCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
APASE
CCCCC
>Mature Secondary Structure
MRSAKTAGSAGVAGSAGAAGSAGAAGSAGTVGTRGRIDKRQAILDAAFTVFAREGYSQAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
IDMIASEAGVAKPTIYNHLGGKENLFRHAMAAAADRTTAKTLAIVGRLTVDVADLPVAFT
HHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCHHHH
DVGRALLECYCAADSWALRRLLHAEIVRFPDLFDMIGANGPNQVGEALADRLARLALAGR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
LRLTDPVEAAEHFLALLTGPVAHRSALGTRTFDDTQIQHTARAATATFLRAFAATGPAAK
CCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
APASE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA