| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315249
Identifier: 158315249
GI number: 158315249
Start: 4080154
End: 4080609
Strand: Reverse
Name: 158315249
Synonym: Franean1_3449
Alternate gene names: NA
Gene position: 4080609-4080154 (Counterclockwise)
Preceding gene: 158315253
Following gene: 158315248
Centisome position: 45.43
GC content: 66.23
Gene sequence:
>456_bases GTGCGCCCTGCTTGTTCTGTCCAAGCGGGTCGTCGATCAGATCGGAGAGGACGAGCTTACGGTCGTAAATACCGCCCTCG CTGTTCCGGAAGGCGAAGTAGTCCTTCATGCCCGGCGCCCCGTTGGCGCTCTGCGCCGGTGGCGCGGAGGACGAGGACCG ATAAGCGGCGCAGGCGGCTGGGTAAACGGTTCATCGGCGCCGGCGATCACCGCGCATGCTGGGTGGCGTACCACCGGGCC CGGTTGACGCCCAGCGGCAAGCGACTCGACCAGCAGGTCGCGGACGCCCTCCGGCCCGTCGCGAGTGCACTGGCCGAAGG CGGCGACCCGCAGTATCTGGCGGACTTCGATCTCATTCTCACCAACATGATCTACGTCGCCATCGGCCGGTTCGCGGACG GGAAACCGACGTCACGGAAATCCTGCCGATTCTCGAGCGCCTCATGTTCCGGCTGA
Upstream 100 bases:
>100_bases ACGTAGTTCGGGATGCCTGCCTTGGCGAGGTCGGGCCACCCGGTGGCCAGCTGCGGGGCACCGAACGTGGCGAAGGTGTC ATTGCCCGCGATGATCTTCA
Downstream 100 bases:
>100_bases CAAGCGACAACCGGTCCGCCGCCATCGCCGCTCGGACCGGCCGCACACAGACAGACGACCGCACAGACGGCGGGTAGGGT TCTGCCAGTTATGCGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRPACSVQAGRRSDRRGRAYGRKYRPRCSGRRSSPSCPAPRWRSAPVARRTRTDKRRRRLGKRFIGAGDHRACWVAYHRA RLTPSGKRLDQQVADALRPVASALAEGGDPQYLADFDLILTNMIYVAIGRFADGKPTSRKSCRFSSASCSG
Sequences:
>Translated_151_residues MRPACSVQAGRRSDRRGRAYGRKYRPRCSGRRSSPSCPAPRWRSAPVARRTRTDKRRRRLGKRFIGAGDHRACWVAYHRA RLTPSGKRLDQQVADALRPVASALAEGGDPQYLADFDLILTNMIYVAIGRFADGKPTSRKSCRFSSASCSG >Mature_151_residues MRPACSVQAGRRSDRRGRAYGRKYRPRCSGRRSSPSCPAPRWRSAPVARRTRTDKRRRRLGKRFIGAGDHRACWVAYHRA RLTPSGKRLDQQVADALRPVASALAEGGDPQYLADFDLILTNMIYVAIGRFADGKPTSRKSCRFSSASCSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16868; Mature: 16868
Theoretical pI: Translated: 12.03; Mature: 12.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPACSVQAGRRSDRRGRAYGRKYRPRCSGRRSSPSCPAPRWRSAPVARRTRTDKRRRRL CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GKRFIGAGDHRACWVAYHRARLTPSGKRLDQQVADALRPVASALAEGGDPQYLADFDLIL HHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TNMIYVAIGRFADGKPTSRKSCRFSSASCSG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRPACSVQAGRRSDRRGRAYGRKYRPRCSGRRSSPSCPAPRWRSAPVARRTRTDKRRRRL CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GKRFIGAGDHRACWVAYHRARLTPSGKRLDQQVADALRPVASALAEGGDPQYLADFDLIL HHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TNMIYVAIGRFADGKPTSRKSCRFSSASCSG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA