Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315247

Identifier: 158315247

GI number: 158315247

Start: 4078128

End: 4079762

Strand: Direct

Name: 158315247

Synonym: Franean1_3447

Alternate gene names: NA

Gene position: 4078128-4079762 (Clockwise)

Preceding gene: 158315246

Following gene: 158315250

Centisome position: 45.4

GC content: 66.85

Gene sequence:

>1635_bases
ATGACCTGGATCCGTGACGGTAAGCCGCCGACCAGCTGCGGCGACTGCCTGGCCTGGGGCGTCTTCGGGGGCCGGTACTG
CCCGGCCTGCGCCAACTTCCGACAGCGGTTTCCCCGCGGCACGTGCGCCGGCTGCGCCCGCCTTCTCCCTGTGAAACGGG
GCTACTGCCGGCTGTGCTGGAAACAGGCCACACTGGAAACCGCCGGGCGTTGGGCACCCGCCATCCAGCCATTCCTGGAA
GCCGTCCGCCACCACCAACTGTTTCTCGCCAGCCTCCACCACAGCGTGCCAGTTCCGGCCGGCCGGCGCCTCGGCAAGAA
CAGTCGAAACGCGCCGGGCCTCACCTCACCCGCCGAAAATCCCGGCCGCGCCGTGGCATGGGTGCAACTTCGGCTAATCG
ACCTGCCGCGGGACTTCACCCGGTTCGACCGCCACAACGCCGACCTCACCAACCCACTGCTGGTCGACGCCCGCCGACGC
GCCCGCGCCATGGGCGAAGCCCGAGGATGGACCCGCCGCGTCCACACCGATGTCGACCGGGCGCTGGTCATACTCCTGTC
CGGGCTCGCTCCCGGCGAGAAAGTCCGCTACTCCGACATGTTTCCCGCTCTCCAAGCACGTTGGATCAGCGTGGAGCGGA
CCGTTCAGGCGTTGGACCATCTCGGGCTGCTCGACGATGACCGGCAGTCCACCTTCGACGCCTACCTCGAGCACAAACTT
GACGGCATCACCCCGGGCATCCGTCGCGACGTCGAGGACTGGATCCGAACCCTGTACGCCGGCGGCCCGCGAACCCGCGC
GCACAGCAAAAACACCGCCTACGGCTATCTCAACGAGATCAAACCCACCCTGCTGGACTGGTCGACCCGGTTCCATCACC
TCCGCGAGATCACCGGCGACGACATCCAGAAGGTCATCAGCTCCGTCCACGGCAACAAACGCGACCACACCATTGTCGTG
CTGCGATCCCTGTTCGATCACTGCAAGAAAACCGGCACCATCTTCCGTAATCCCGTCGCGCGGCTACGCGCCGGCCGCAA
ACACTACAACCTCATCCTCCCGCTCCACCCCGAGCGGGTCAGCATGGTTCTTGATGCCGCGACCAGTCCCGCAGCCCGGC
TCGTCGTCGTCCTCGCCGGAATCCACGCCGCCCGCAACAAGACAACCCGCCACGTGCAGCTCGACGATGTCGACCTCGGC
AACCGCCGCCTCGTCATCGCCGACATAAACCGACCACTCGACGACCTCACCTACCATGCCGTCCTGGACTGGCTCGCCTA
CCGCCGCGACCGATGGCCCAACACCGCCAATCCCCATCTGATAGTCAATGGACAGACCGCGCTGGGACACGGTCCCGTCA
GCGACAGCTGGCTATCCCTGATCGTCCGAGGCCTGCCCGTCACCCTCGAACAACTACGCGTCGACAGACAGCTCGACGAG
GCCCTCACCCACGGCCCCGACCCCCTCCACCTCGCCGCCGTCTTCGGCCTCGACCAGAACACCGCCATGCGCTACGCCAA
CGCCGCCCGCCACCTCCTCGAGTCGCTCGCCGAGCGGCACACTCCCGACGGTTCAGCAGGAACCCAAGGGTCAACCACCG
GTCCAAGCACCGACCGACCCGCGAGTTCGCGCTGA

Upstream 100 bases:

>100_bases
CCCGACCCGACAGCGCCGACCAGCCCGCAGTGGCGCAGGCCGCGGCCCGGCCGGTGACCCCCAGACGCCGGGACGGACGC
TCCCTACCGCCGATGTGACG

Downstream 100 bases:

>100_bases
AAAGCCTTCAGATCGCGTGAACCCACGGGGATTCAGTGGAGCGATGTAGGCGGGAACGCCCAGCCGGATTCCCAGGGACC
ACACATTACCCAGCCCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MTWIRDGKPPTSCGDCLAWGVFGGRYCPACANFRQRFPRGTCAGCARLLPVKRGYCRLCWKQATLETAGRWAPAIQPFLE
AVRHHQLFLASLHHSVPVPAGRRLGKNSRNAPGLTSPAENPGRAVAWVQLRLIDLPRDFTRFDRHNADLTNPLLVDARRR
ARAMGEARGWTRRVHTDVDRALVILLSGLAPGEKVRYSDMFPALQARWISVERTVQALDHLGLLDDDRQSTFDAYLEHKL
DGITPGIRRDVEDWIRTLYAGGPRTRAHSKNTAYGYLNEIKPTLLDWSTRFHHLREITGDDIQKVISSVHGNKRDHTIVV
LRSLFDHCKKTGTIFRNPVARLRAGRKHYNLILPLHPERVSMVLDAATSPAARLVVVLAGIHAARNKTTRHVQLDDVDLG
NRRLVIADINRPLDDLTYHAVLDWLAYRRDRWPNTANPHLIVNGQTALGHGPVSDSWLSLIVRGLPVTLEQLRVDRQLDE
ALTHGPDPLHLAAVFGLDQNTAMRYANAARHLLESLAERHTPDGSAGTQGSTTGPSTDRPASSR

Sequences:

>Translated_544_residues
MTWIRDGKPPTSCGDCLAWGVFGGRYCPACANFRQRFPRGTCAGCARLLPVKRGYCRLCWKQATLETAGRWAPAIQPFLE
AVRHHQLFLASLHHSVPVPAGRRLGKNSRNAPGLTSPAENPGRAVAWVQLRLIDLPRDFTRFDRHNADLTNPLLVDARRR
ARAMGEARGWTRRVHTDVDRALVILLSGLAPGEKVRYSDMFPALQARWISVERTVQALDHLGLLDDDRQSTFDAYLEHKL
DGITPGIRRDVEDWIRTLYAGGPRTRAHSKNTAYGYLNEIKPTLLDWSTRFHHLREITGDDIQKVISSVHGNKRDHTIVV
LRSLFDHCKKTGTIFRNPVARLRAGRKHYNLILPLHPERVSMVLDAATSPAARLVVVLAGIHAARNKTTRHVQLDDVDLG
NRRLVIADINRPLDDLTYHAVLDWLAYRRDRWPNTANPHLIVNGQTALGHGPVSDSWLSLIVRGLPVTLEQLRVDRQLDE
ALTHGPDPLHLAAVFGLDQNTAMRYANAARHLLESLAERHTPDGSAGTQGSTTGPSTDRPASSR
>Mature_543_residues
TWIRDGKPPTSCGDCLAWGVFGGRYCPACANFRQRFPRGTCAGCARLLPVKRGYCRLCWKQATLETAGRWAPAIQPFLEA
VRHHQLFLASLHHSVPVPAGRRLGKNSRNAPGLTSPAENPGRAVAWVQLRLIDLPRDFTRFDRHNADLTNPLLVDARRRA
RAMGEARGWTRRVHTDVDRALVILLSGLAPGEKVRYSDMFPALQARWISVERTVQALDHLGLLDDDRQSTFDAYLEHKLD
GITPGIRRDVEDWIRTLYAGGPRTRAHSKNTAYGYLNEIKPTLLDWSTRFHHLREITGDDIQKVISSVHGNKRDHTIVVL
RSLFDHCKKTGTIFRNPVARLRAGRKHYNLILPLHPERVSMVLDAATSPAARLVVVLAGIHAARNKTTRHVQLDDVDLGN
RRLVIADINRPLDDLTYHAVLDWLAYRRDRWPNTANPHLIVNGQTALGHGPVSDSWLSLIVRGLPVTLEQLRVDRQLDEA
LTHGPDPLHLAAVFGLDQNTAMRYANAARHLLESLAERHTPDGSAGTQGSTTGPSTDRPASSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60871; Mature: 60740

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWIRDGKPPTSCGDCLAWGVFGGRYCPACANFRQRFPRGTCAGCARLLPVKRGYCRLCW
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
KQATLETAGRWAPAIQPFLEAVRHHQLFLASLHHSVPVPAGRRLGKNSRNAPGLTSPAEN
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC
PGRAVAWVQLRLIDLPRDFTRFDRHNADLTNPLLVDARRRARAMGEARGWTRRVHTDVDR
CCCEEEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVILLSGLAPGEKVRYSDMFPALQARWISVERTVQALDHLGLLDDDRQSTFDAYLEHKL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
DGITPGIRRDVEDWIRTLYAGGPRTRAHSKNTAYGYLNEIKPTLLDWSTRFHHLREITGD
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCH
DIQKVISSVHGNKRDHTIVVLRSLFDHCKKTGTIFRNPVARLRAGRKHYNLILPLHPERV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCEEEEECCHHHH
SMVLDAATSPAARLVVVLAGIHAARNKTTRHVQLDDVDLGNRRLVIADINRPLDDLTYHA
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHH
VLDWLAYRRDRWPNTANPHLIVNGQTALGHGPVSDSWLSLIVRGLPVTLEQLRVDRQLDE
HHHHHHHHHHCCCCCCCCEEEEECCEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
ALTHGPDPLHLAAVFGLDQNTAMRYANAARHLLESLAERHTPDGSAGTQGSTTGPSTDRP
HHHCCCCCEEEEHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ASSR
CCCC
>Mature Secondary Structure 
TWIRDGKPPTSCGDCLAWGVFGGRYCPACANFRQRFPRGTCAGCARLLPVKRGYCRLCW
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
KQATLETAGRWAPAIQPFLEAVRHHQLFLASLHHSVPVPAGRRLGKNSRNAPGLTSPAEN
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC
PGRAVAWVQLRLIDLPRDFTRFDRHNADLTNPLLVDARRRARAMGEARGWTRRVHTDVDR
CCCEEEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVILLSGLAPGEKVRYSDMFPALQARWISVERTVQALDHLGLLDDDRQSTFDAYLEHKL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
DGITPGIRRDVEDWIRTLYAGGPRTRAHSKNTAYGYLNEIKPTLLDWSTRFHHLREITGD
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCH
DIQKVISSVHGNKRDHTIVVLRSLFDHCKKTGTIFRNPVARLRAGRKHYNLILPLHPERV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCEEEEECCHHHH
SMVLDAATSPAARLVVVLAGIHAARNKTTRHVQLDDVDLGNRRLVIADINRPLDDLTYHA
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHH
VLDWLAYRRDRWPNTANPHLIVNGQTALGHGPVSDSWLSLIVRGLPVTLEQLRVDRQLDE
HHHHHHHHHHCCCCCCCCEEEEECCEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
ALTHGPDPLHLAAVFGLDQNTAMRYANAARHLLESLAERHTPDGSAGTQGSTTGPSTDRP
HHHCCCCCEEEEHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ASSR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA