Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315239

Identifier: 158315239

GI number: 158315239

Start: 4070259

End: 4070747

Strand: Reverse

Name: 158315239

Synonym: Franean1_3439

Alternate gene names: NA

Gene position: 4070747-4070259 (Counterclockwise)

Preceding gene: 158315241

Following gene: 158315238

Centisome position: 45.32

GC content: 69.53

Gene sequence:

>489_bases
ATGCAACTGACGGACGAGGAGTGGGCGTTCATCGAGCCTTACCTGCCGATCGGCGGGTTCGGCCCGTACCCGGCGCGGCT
GCGGGCGCAGTTCGAGGGGGTGGTGTGGCGGTTTCGGACGGGTGGGCAGTGGCGGGAGATGCCGGCGGAGTTCGGTGCCT
GGCCGACGGTCCACAACCGGTTCCGGCAGTGGCGGGACGCTGGTGTCTTCGAAGCCCTGCTGGAGGGCATGGTCGCCGAG
GCCGCGAAGCGGGGTGAGGTGGACCTGTCCTTGGTCAGTGTGGACTCCACCACCGCCCAGGCCCACCACGATGCTGCCGG
GATGCACCTGGGCCACGACGTCATCACCGCCTTGGAGAAAGCCGCTGTCGAGGAGGAGAAGGCCCGGGAAAAGGGGGCGA
CTCGGAGGGACAAGACGGGCAGAACGCCGGATGCGACCCCGAGCGGGAAGAGCGACGACGTATCCGGCGCCGGCACGGCC
TGCGGCTGA

Upstream 100 bases:

>100_bases
AGTGAGGTCGTCCTCTAGGGCGCGTGTCGAGTTGTGATCTGTCTGCGGGATTCGCCCTCGTGGTGGGGTCTGATCCGGTA
GATCGTCCTGCATGACACGG

Downstream 100 bases:

>100_bases
AAGCTGCTCTGCTGGGACGGTCGAGGGGCGGGCAGACCAGCAAGGTCCACCTCGCCGCCGACCGCAGGTGCCGCCCGCTG
GCGTTCGTCCTGACCGCGGG

Product: IS1647-like transposase

Products: NA

Alternate protein names: ISBm1 Transposase OrfA; Transposase And Inactivated Derivatives-Like Protein; Transposase IS4 Family Protein; Insertion Element Transposase; ISPs1 Transposase OrfA; IS5 Family Transposase OrfA; Transposase-Like Protein; Transposase And Inactivated Derivative; ISRin4 Transposase OrfA; IS4 Insertion Sequence Transposase Protein; Transposase Is4 Family Protein; ISSod6 Transposase; LOW QUALITY PROTEIN Transposase IS4 Family Protein; Transposase-Related Protein; Transposase Related Protein; ISBm1 Transposase; IS5 Family Transposase; Transposase Fragment

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQLTDEEWAFIEPYLPIGGFGPYPARLRAQFEGVVWRFRTGGQWREMPAEFGAWPTVHNRFRQWRDAGVFEALLEGMVAE
AAKRGEVDLSLVSVDSTTAQAHHDAAGMHLGHDVITALEKAAVEEEKAREKGATRRDKTGRTPDATPSGKSDDVSGAGTA
CG

Sequences:

>Translated_162_residues
MQLTDEEWAFIEPYLPIGGFGPYPARLRAQFEGVVWRFRTGGQWREMPAEFGAWPTVHNRFRQWRDAGVFEALLEGMVAE
AAKRGEVDLSLVSVDSTTAQAHHDAAGMHLGHDVITALEKAAVEEEKAREKGATRRDKTGRTPDATPSGKSDDVSGAGTA
CG
>Mature_162_residues
MQLTDEEWAFIEPYLPIGGFGPYPARLRAQFEGVVWRFRTGGQWREMPAEFGAWPTVHNRFRQWRDAGVFEALLEGMVAE
AAKRGEVDLSLVSVDSTTAQAHHDAAGMHLGHDVITALEKAAVEEEKAREKGATRRDKTGRTPDATPSGKSDDVSGAGTA
CG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17712; Mature: 17712

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTDEEWAFIEPYLPIGGFGPYPARLRAQFEGVVWRFRTGGQWREMPAEFGAWPTVHNR
CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCHHHCCHHHCCCHHHHHH
FRQWRDAGVFEALLEGMVAEAAKRGEVDLSLVSVDSTTAQAHHDAAGMHLGHDVITALEK
HHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH
AAVEEEKAREKGATRRDKTGRTPDATPSGKSDDVSGAGTACG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLTDEEWAFIEPYLPIGGFGPYPARLRAQFEGVVWRFRTGGQWREMPAEFGAWPTVHNR
CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCHHHCCHHHCCCHHHHHH
FRQWRDAGVFEALLEGMVAEAAKRGEVDLSLVSVDSTTAQAHHDAAGMHLGHDVITALEK
HHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH
AAVEEEKAREKGATRRDKTGRTPDATPSGKSDDVSGAGTACG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA