| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is insG [H]
Identifier: 158315229
GI number: 158315229
Start: 4059514
End: 4060779
Strand: Direct
Name: insG [H]
Synonym: Franean1_3429
Alternate gene names: 158315229
Gene position: 4059514-4060779 (Clockwise)
Preceding gene: 158315225
Following gene: 158315231
Centisome position: 45.2
GC content: 71.88
Gene sequence:
>1266_bases GTGCCGAGACGCGGTCAGGTCAAGGAGAAGCCCGAGGACCGGTTGGTGGACCGGGTCGGGTTGGGGGTGCTGGCGGCGCA GTTCCCGGACGCGCTGGTCGACCGGGTGGTCGCTGAGACCGGGCGGCGTGAGCGGCGGACGCGGGACCTGCCGGCGGCGT TGACCCTGCGGTATGTGGTGGCGTTGGCGTTGTTCCCGTCGGACGGCTACGACGAGGTGATGCGGCAGGTGAAGGTCGCC GACGACTGGCTGTCGGACAAGGCCGGCCCGGTGAAGGTGCCCGCGACCACGGCGATCACGAAGGCGCGGGACCGGCTCGG GGTGGAGCCGGTGAAGCTGCTGTTCGAGCGCACGGCGGTGCCGATGGCCCTGCCCCGGCGGACGGTGGGGGCGTTCTACC GGGGCTGGCGGGTGTGCACGGTCGACGGGACGACGCTGCTGGTCCCGGACACCGACGAGAACGCCGCCGCGTTCGGTAAG CCCGGCAACGACCAGGGCGAGGGCGCGTTGCCGCAGGTCCGGGTGCTCGGGCTGGTCGAGTGCGGCACCCGGGCGCTGCT GGGCGCCGGGTTCGGCGGGACCGGGGGGTCCAAGGCTGCCAGCGAGCAGGCCCTGTTCCCCGACCTGCTCGGCGCGTTGC GCCCGGGCATGCTGGTGCTGGCCGACCGGAACTTCCTCGGCTTCGAGTTGTTCGCCAAGGCCGCCGCGACCGGCGCGGAC CTGCTGTGGCGGGCCAAGTCCGACCGGCGCCTGCCCATCGACACCGAGCTCGCCGACGGCTCTTACCTGTCCCACCTCGT CGAACCCGGCACCCGAGACAAAGGCCGGAAAATCACGGTACGGGTCGTCGAGTACACCCTCGACCGCGACCCCGACAGCC CCCTGCCCGCGGGCAAGAAGGAGACCTACCGGCTGGTCACCACAATCCTCGATCCCGACGCCGCGCCCGCCACCGACCTG GCCGCGCTCTACAGCGACCGGTGGGAAGTCGAGACCCTCCTCGACGAAATCAAGGTCCACCAGCAGGACGGCCGGCTGGT GCTGCGGTCCCGGGCCCCCGACCGGGTCGAGCAGGAGGTCTGGGGCGTCCTGCTGCTGCACCGGGCGTTACGGAAACTGA TCCACGACACCGCGCTGGTCGAAGGGATCGACCCCGACCGGCTCTCCTTCACCCACACCGTGACGATCGTCCGCCGCCAG GTTGTGCGCCGGGCGATTTTCCCCCCTCCGCCGGACGGCCCGGATCCTGGCCGCGGTGACCACTGA
Upstream 100 bases:
>100_bases GCCCGCCAGCGGGCCTGGGCGGCCTCGATGAGTTTGAACGCCATGGCCAGCCCGGCGGCCAATACCAGGAACTTAGCATC TGATCGTGTAGGTTCGGTGG
Downstream 100 bases:
>100_bases GATCGCCGAACACGTCCTCCCGAAACGCCTCCGCTCCAATCCCCGGGTCGTCCGGCGGACCAAGCGCACCCCGTTCCCCG CCAAGAAGCCGATCGACAAG
Product: transposase IS4 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MPRRGQVKEKPEDRLVDRVGLGVLAAQFPDALVDRVVAETGRRERRTRDLPAALTLRYVVALALFPSDGYDEVMRQVKVA DDWLSDKAGPVKVPATTAITKARDRLGVEPVKLLFERTAVPMALPRRTVGAFYRGWRVCTVDGTTLLVPDTDENAAAFGK PGNDQGEGALPQVRVLGLVECGTRALLGAGFGGTGGSKAASEQALFPDLLGALRPGMLVLADRNFLGFELFAKAAATGAD LLWRAKSDRRLPIDTELADGSYLSHLVEPGTRDKGRKITVRVVEYTLDRDPDSPLPAGKKETYRLVTTILDPDAAPATDL AALYSDRWEVETLLDEIKVHQQDGRLVLRSRAPDRVEQEVWGVLLLHRALRKLIHDTALVEGIDPDRLSFTHTVTIVRRQ VVRRAIFPPPPDGPDPGRGDH
Sequences:
>Translated_421_residues MPRRGQVKEKPEDRLVDRVGLGVLAAQFPDALVDRVVAETGRRERRTRDLPAALTLRYVVALALFPSDGYDEVMRQVKVA DDWLSDKAGPVKVPATTAITKARDRLGVEPVKLLFERTAVPMALPRRTVGAFYRGWRVCTVDGTTLLVPDTDENAAAFGK PGNDQGEGALPQVRVLGLVECGTRALLGAGFGGTGGSKAASEQALFPDLLGALRPGMLVLADRNFLGFELFAKAAATGAD LLWRAKSDRRLPIDTELADGSYLSHLVEPGTRDKGRKITVRVVEYTLDRDPDSPLPAGKKETYRLVTTILDPDAAPATDL AALYSDRWEVETLLDEIKVHQQDGRLVLRSRAPDRVEQEVWGVLLLHRALRKLIHDTALVEGIDPDRLSFTHTVTIVRRQ VVRRAIFPPPPDGPDPGRGDH >Mature_420_residues PRRGQVKEKPEDRLVDRVGLGVLAAQFPDALVDRVVAETGRRERRTRDLPAALTLRYVVALALFPSDGYDEVMRQVKVAD DWLSDKAGPVKVPATTAITKARDRLGVEPVKLLFERTAVPMALPRRTVGAFYRGWRVCTVDGTTLLVPDTDENAAAFGKP GNDQGEGALPQVRVLGLVECGTRALLGAGFGGTGGSKAASEQALFPDLLGALRPGMLVLADRNFLGFELFAKAAATGADL LWRAKSDRRLPIDTELADGSYLSHLVEPGTRDKGRKITVRVVEYTLDRDPDSPLPAGKKETYRLVTTILDPDAAPATDLA ALYSDRWEVETLLDEIKVHQQDGRLVLRSRAPDRVEQEVWGVLLLHRALRKLIHDTALVEGIDPDRLSFTHTVTIVRRQV VRRAIFPPPPDGPDPGRGDH
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=395, Percent_Identity=27.8481012658228, Blast_Score=132, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 46151; Mature: 46020
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRGQVKEKPEDRLVDRVGLGVLAAQFPDALVDRVVAETGRRERRTRDLPAALTLRYVV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHH ALALFPSDGYDEVMRQVKVADDWLSDKAGPVKVPATTAITKARDRLGVEPVKLLFERTAV HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHCC PMALPRRTVGAFYRGWRVCTVDGTTLLVPDTDENAAAFGKPGNDQGEGALPQVRVLGLVE CHHCCHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH CGTRALLGAGFGGTGGSKAASEQALFPDLLGALRPGMLVLADRNFLGFELFAKAAATGAD HCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCH LLWRAKSDRRLPIDTELADGSYLSHLVEPGTRDKGRKITVRVVEYTLDRDPDSPLPAGKK HEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCH ETYRLVTTILDPDAAPATDLAALYSDRWEVETLLDEIKVHQQDGRLVLRSRAPDRVEQEV HHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH WGVLLLHRALRKLIHDTALVEGIDPDRLSFTHTVTIVRRQVVRRAIFPPPPDGPDPGRGD HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC H C >Mature Secondary Structure PRRGQVKEKPEDRLVDRVGLGVLAAQFPDALVDRVVAETGRRERRTRDLPAALTLRYVV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHH ALALFPSDGYDEVMRQVKVADDWLSDKAGPVKVPATTAITKARDRLGVEPVKLLFERTAV HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHCC PMALPRRTVGAFYRGWRVCTVDGTTLLVPDTDENAAAFGKPGNDQGEGALPQVRVLGLVE CHHCCHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH CGTRALLGAGFGGTGGSKAASEQALFPDLLGALRPGMLVLADRNFLGFELFAKAAATGAD HCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCH LLWRAKSDRRLPIDTELADGSYLSHLVEPGTRDKGRKITVRVVEYTLDRDPDSPLPAGKK HEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCH ETYRLVTTILDPDAAPATDLAALYSDRWEVETLLDEIKVHQQDGRLVLRSRAPDRVEQEV HHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH WGVLLLHRALRKLIHDTALVEGIDPDRLSFTHTVTIVRRQVVRRAIFPPPPDGPDPGRGD HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]