Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315227

Identifier: 158315227

GI number: 158315227

Start: 4058136

End: 4059002

Strand: Reverse

Name: 158315227

Synonym: Franean1_3427

Alternate gene names: NA

Gene position: 4059002-4058136 (Counterclockwise)

Preceding gene: 158315228

Following gene: 158315226

Centisome position: 45.19

GC content: 53.52

Gene sequence:

>867_bases
GTGTCCGGACTAGGCAAGACCGCCACCTTGCGTGCGGACATAGAGTGCGCTAATGTTCCAAACGCTGGCAGTGAGCTTGC
AAGCTTAAAGCACGCCCTTGGGTCAAGGATCGGTCGCGTCCGGACTGGAAGTCTTCGGTCATCGATTGCAGTATGTGTAT
GCGATGGCTATTCGTTAATTGCACTTGAGCTGGGCTCATGTGCGTATGTGCGAAAAGGGGGAAAGCTGACCATGTCATGG
CGAAGAAATATCCTTCGCGGCGCCGCGATAGGCGTCGGTGGATCGGTCGCGGCCGTCGCGACACCTGCTCTTGCGTACAA
CGGTCAAGCCGCAGCAGATTATGCCGGCCAATATGCCATAAATGACAATATCGCGTGGGTTCATTTTCAAAATGATTGCA
CGAATTTTGTATCGCAGGCACTGTATGCCGGCGGTTTTCCAATGACTGGTTATGGTGGCAGTAGTGGCAATAATGTGTGG
TGGGGCGATCTCGCCTATACGCCGCACGCTGGCAACGGCCGATCCATCTCGTGGAGCTCATCGGATGATCTCCGTGTGTA
TCTCGACTCGCATAATGGTGGGACCGCTTCCCAGGGGGCGGGTACGCAGAACAAAATTCCGTACACACCTGGCAATATCG
TCACAGGCGACGTAGTTTTCTACAATTGGGATAATGCCATGAATCCACAACTATATGATCACGTGGCGATTCAAGTGGGT
CAAGGCACCGATCCCGATCCCGAATCAGGTTGGATCGGAAACTTGGTCGATACGCACACCACCAATCGCGGGAAAGCGAT
TTGGCATCTCTGGCCGTATAACCCGAGGGCATCGACGACGGTCACAAAAGAGTACCACATTAACTAG

Upstream 100 bases:

>100_bases
AAGTGCTTGGCGGTACGCGCTTGTGGCTAATCGCGAGTCGCAACTCTATGTCACAGAGAGCCGTCCGTGTCGTTCAGATC
CGACTAGGACTCGATCGACT

Downstream 100 bases:

>100_bases
CATCCAGGGTTGATACGGCGGACAGCTACCGGGCAAGGAGTCGTCGTGAAGGAATATCGAGTTCGGCGTTATCACCAGAA
AGGTCGACTGTGAAACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSGLGKTATLRADIECANVPNAGSELASLKHALGSRIGRVRTGSLRSSIAVCVCDGYSLIALELGSCAYVRKGGKLTMSW
RRNILRGAAIGVGGSVAAVATPALAYNGQAAADYAGQYAINDNIAWVHFQNDCTNFVSQALYAGGFPMTGYGGSSGNNVW
WGDLAYTPHAGNGRSISWSSSDDLRVYLDSHNGGTASQGAGTQNKIPYTPGNIVTGDVVFYNWDNAMNPQLYDHVAIQVG
QGTDPDPESGWIGNLVDTHTTNRGKAIWHLWPYNPRASTTVTKEYHIN

Sequences:

>Translated_288_residues
MSGLGKTATLRADIECANVPNAGSELASLKHALGSRIGRVRTGSLRSSIAVCVCDGYSLIALELGSCAYVRKGGKLTMSW
RRNILRGAAIGVGGSVAAVATPALAYNGQAAADYAGQYAINDNIAWVHFQNDCTNFVSQALYAGGFPMTGYGGSSGNNVW
WGDLAYTPHAGNGRSISWSSSDDLRVYLDSHNGGTASQGAGTQNKIPYTPGNIVTGDVVFYNWDNAMNPQLYDHVAIQVG
QGTDPDPESGWIGNLVDTHTTNRGKAIWHLWPYNPRASTTVTKEYHIN
>Mature_287_residues
SGLGKTATLRADIECANVPNAGSELASLKHALGSRIGRVRTGSLRSSIAVCVCDGYSLIALELGSCAYVRKGGKLTMSWR
RNILRGAAIGVGGSVAAVATPALAYNGQAAADYAGQYAINDNIAWVHFQNDCTNFVSQALYAGGFPMTGYGGSSGNNVWW
GDLAYTPHAGNGRSISWSSSDDLRVYLDSHNGGTASQGAGTQNKIPYTPGNIVTGDVVFYNWDNAMNPQLYDHVAIQVGQ
GTDPDPESGWIGNLVDTHTTNRGKAIWHLWPYNPRASTTVTKEYHIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30605; Mature: 30474

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLGKTATLRADIECANVPNAGSELASLKHALGSRIGRVRTGSLRSSIAVCVCDGYSLI
CCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEECCCEEE
ALELGSCAYVRKGGKLTMSWRRNILRGAAIGVGGSVAAVATPALAYNGQAAADYAGQYAI
EEEECCEEEEECCCCEEHHHHHHHHHHHEECCCCCCHHHCCCCEEECCCCCHHCCCEEEE
NDNIAWVHFQNDCTNFVSQALYAGGFPMTGYGGSSGNNVWWGDLAYTPHAGNGRSISWSS
CCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECEEECCCCCCCCEEEECC
SDDLRVYLDSHNGGTASQGAGTQNKIPYTPGNIVTGDVVFYNWDNAMNPQLYDHVAIQVG
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCEEEEEEEEC
QGTDPDPESGWIGNLVDTHTTNRGKAIWHLWPYNPRASTTVTKEYHIN
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure 
SGLGKTATLRADIECANVPNAGSELASLKHALGSRIGRVRTGSLRSSIAVCVCDGYSLI
CCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEECCCEEE
ALELGSCAYVRKGGKLTMSWRRNILRGAAIGVGGSVAAVATPALAYNGQAAADYAGQYAI
EEEECCEEEEECCCCEEHHHHHHHHHHHEECCCCCCHHHCCCCEEECCCCCHHCCCEEEE
NDNIAWVHFQNDCTNFVSQALYAGGFPMTGYGGSSGNNVWWGDLAYTPHAGNGRSISWSS
CCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECEEECCCCCCCCEEEECC
SDDLRVYLDSHNGGTASQGAGTQNKIPYTPGNIVTGDVVFYNWDNAMNPQLYDHVAIQVG
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCEEEEEEEEC
QGTDPDPESGWIGNLVDTHTTNRGKAIWHLWPYNPRASTTVTKEYHIN
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA