Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315215

Identifier: 158315215

GI number: 158315215

Start: 4045559

End: 4046086

Strand: Direct

Name: 158315215

Synonym: Franean1_3415

Alternate gene names: NA

Gene position: 4045559-4046086 (Clockwise)

Preceding gene: 158315213

Following gene: 158315216

Centisome position: 45.04

GC content: 69.51

Gene sequence:

>528_bases
GTGGAGATGGCCCGGATGTTCCGGCTGGCCAAGGCCTCCGCGGTCAAAGCACGCACCCAGGCGATCAACCAGCTCAAAGC
AGTCCTGGTCCGCACCGAACCTGGCCTGCGGGAATCCCTCGCCGGGCTGGGCCGCACCACACTCGTGCGTCGATGCGCCG
CGCTCGACGAGGTCGAGCCGACCGACACAGTTACCGCCGCACGTTACACGTTGCGCCAGCTCGCGACCCGGATCGTGGCG
CTCACCGCCGAGATCGAGGACCTCAACCGCCGGTTGGCTGCCGTGCTCAACCGCCACGCACCCGCCCTGCTCGCCAGGGT
CGGGGTCGGACCGGACACCGCCGCGGCGCTGCTCATCGTCGCCGGCGACAACCCGCGACGGCTGACCAGCGACCGATCCT
TCGCGGCACTGCGCGGTGTGAGTCCGATCGAGGCCTCGTCCGGGAAGACCCGCCGACACCACCTCAATCGCGGCGGCGAC
CGCCAGGCCAACTCCGCGCTGCACCGAGCATTTTCAATCTCGCTTTGA

Upstream 100 bases:

>100_bases
CGCAGGTCACCGCCCAAATCGGGGTTCTGGAGCCCCACAGGCCGCCCGTGCCGTTCTGACCGGCCAGGCCACCGCGACCG
CGAAGTCCGGCGATGGACCG

Downstream 100 bases:

>100_bases
CTGAATCGTCCGCGAATTCCATGCGGAATGTTTGACGGATTCGCTGGAAGATCGCCCGGCGGGGGGTGTTGTGCGAAGCC
TGTTGAAGTAGCGGCGAGAA

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: Transposase Of; Family Transposase

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MEMARMFRLAKASAVKARTQAINQLKAVLVRTEPGLRESLAGLGRTTLVRRCAALDEVEPTDTVTAARYTLRQLATRIVA
LTAEIEDLNRRLAAVLNRHAPALLARVGVGPDTAAALLIVAGDNPRRLTSDRSFAALRGVSPIEASSGKTRRHHLNRGGD
RQANSALHRAFSISL

Sequences:

>Translated_175_residues
MEMARMFRLAKASAVKARTQAINQLKAVLVRTEPGLRESLAGLGRTTLVRRCAALDEVEPTDTVTAARYTLRQLATRIVA
LTAEIEDLNRRLAAVLNRHAPALLARVGVGPDTAAALLIVAGDNPRRLTSDRSFAALRGVSPIEASSGKTRRHHLNRGGD
RQANSALHRAFSISL
>Mature_175_residues
MEMARMFRLAKASAVKARTQAINQLKAVLVRTEPGLRESLAGLGRTTLVRRCAALDEVEPTDTVTAARYTLRQLATRIVA
LTAEIEDLNRRLAAVLNRHAPALLARVGVGPDTAAALLIVAGDNPRRLTSDRSFAALRGVSPIEASSGKTRRHHLNRGGD
RQANSALHRAFSISL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18907; Mature: 18907

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMARMFRLAKASAVKARTQAINQLKAVLVRTEPGLRESLAGLGRTTLVRRCAALDEVEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCCC
TDTVTAARYTLRQLATRIVALTAEIEDLNRRLAAVLNRHAPALLARVGVGPDTAAALLIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHEEEEE
AGDNPRRLTSDRSFAALRGVSPIEASSGKTRRHHLNRGGDRQANSALHRAFSISL
ECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEMARMFRLAKASAVKARTQAINQLKAVLVRTEPGLRESLAGLGRTTLVRRCAALDEVEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCCC
TDTVTAARYTLRQLATRIVALTAEIEDLNRRLAAVLNRHAPALLARVGVGPDTAAALLIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHEEEEE
AGDNPRRLTSDRSFAALRGVSPIEASSGKTRRHHLNRGGDRQANSALHRAFSISL
ECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA