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The map label for this gene is 158315214

Identifier: 158315214

GI number: 158315214

Start: 4044349

End: 4045455

Strand: Reverse

Name: 158315214

Synonym: Franean1_3414

Alternate gene names: NA

Gene position: 4045455-4044349 (Counterclockwise)

Preceding gene: 158315218

Following gene: 158315211

Centisome position: 45.04

GC content: 68.02

Gene sequence:

>1107_bases
TTGCCTGCCGGACTGGGCCTGTGTCGGGCAGGCTGGATGGTCATGGTGTGGTCGCTGCTCTACGCCCTGACACGCAACGC
TCTCGGACTGATGTTGCTCCACGTGCGCGGCGACACCGCGAAAGACGTCGAGCTCCTCGTCCTACGACATCAGGTGGCGG
TGTTACGACGGCAGGTGAACCGTCCGACGCTGGAACCGGCGGATCGGGTGATCCTCGCGGCGCTGTCCCGGCTGCTGCCC
CGGGCTCGCTGGGGTTCGTTCTTCGTCACCCCGGCCACCGTGTTGCGCTGGCACCGGGAATTCCTCGCACGAAAATGGAC
CTATCCCCGCAAGACACCCGGGCGGCCGCCGGTCCGCAGGGAGATCCGCGAGCTGGTCCTGCGCCTCGCGCAGGAAAATC
CGACCTGGGGCCACCGCCGGATCCAAGGCGAACTCGTCGGGCTGGGCTACCCGGTCGGGGTCGCCACCGTCTGGCGGATC
CTGCACCGCGCCGGCATCGACCCCGCGCCCCGGCGGGCCGACACCTCTTGGCGTACGTTCCTGCGCGCCCAGGCCTCTGG
CCTGCTGGCCTGCGACTTCTTCACGGTGGACACCGTGTTCCTCCAGCGGATCTACGTGTTCTTCGTCGTCGAACACGCCA
CCCGCCGTGTTCACGTCCTCGGGGCCACGAAGCACCCGACCTCGGCGTGGGTCACCCAGCGGGCACGGAACCTGCTGATG
GATCTCGACGAGCGCAGCCACCGCTTCCGATTCCTGATCCGTGACCGCGACACGAAGTTCACGGCTTCCTTCGACGCTGT
CTTCGCTGGTGCCGGCATCGACGTGGTACGCACACCACCGCAAGCCCCGACGGCGAACGCGATCGCGGAACGCTGGGTCG
GCACCGCCCGCCGGGAATGCACCGACAGATTATTGATCGTCTCCGAACGGCACCTGACGTCAGTCCTCGGCAGCTACGCC
GAGCATTTCAACACCCACCGACCCCACCGCTCCCTCGGCCAGCACCCACCCGACCCGCCGCCCATGGTCACCCCGACCTC
GGATTCCACCGTCCGTCGCACCCGCATCCTCGGCGGGCTGATCAACGAGTACCGCAACGCCGCCTGA

Upstream 100 bases:

>100_bases
TCCATCGCCGGACTTCGCGGTCGCGGTGGCCTGGCCGGTCAGAACGGCACGGGCGGCCTGTGGGGCTCCAGAACCCCGAT
TTGGGCGGTGACCTGCGCGT

Downstream 100 bases:

>100_bases
TGAGATCCCCGGACGATCACAGTAACCGTAAAAGGCCAGCTCACACGCCGAAACCCGGATTTCGGAGCCCCACAGGGTGA
TCCGACATCGAGCTGCAGCT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MPAGLGLCRAGWMVMVWSLLYALTRNALGLMLLHVRGDTAKDVELLVLRHQVAVLRRQVNRPTLEPADRVILAALSRLLP
RARWGSFFVTPATVLRWHREFLARKWTYPRKTPGRPPVRREIRELVLRLAQENPTWGHRRIQGELVGLGYPVGVATVWRI
LHRAGIDPAPRRADTSWRTFLRAQASGLLACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGATKHPTSAWVTQRARNLLM
DLDERSHRFRFLIRDRDTKFTASFDAVFAGAGIDVVRTPPQAPTANAIAERWVGTARRECTDRLLIVSERHLTSVLGSYA
EHFNTHRPHRSLGQHPPDPPPMVTPTSDSTVRRTRILGGLINEYRNAA

Sequences:

>Translated_368_residues
MPAGLGLCRAGWMVMVWSLLYALTRNALGLMLLHVRGDTAKDVELLVLRHQVAVLRRQVNRPTLEPADRVILAALSRLLP
RARWGSFFVTPATVLRWHREFLARKWTYPRKTPGRPPVRREIRELVLRLAQENPTWGHRRIQGELVGLGYPVGVATVWRI
LHRAGIDPAPRRADTSWRTFLRAQASGLLACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGATKHPTSAWVTQRARNLLM
DLDERSHRFRFLIRDRDTKFTASFDAVFAGAGIDVVRTPPQAPTANAIAERWVGTARRECTDRLLIVSERHLTSVLGSYA
EHFNTHRPHRSLGQHPPDPPPMVTPTSDSTVRRTRILGGLINEYRNAA
>Mature_367_residues
PAGLGLCRAGWMVMVWSLLYALTRNALGLMLLHVRGDTAKDVELLVLRHQVAVLRRQVNRPTLEPADRVILAALSRLLPR
ARWGSFFVTPATVLRWHREFLARKWTYPRKTPGRPPVRREIRELVLRLAQENPTWGHRRIQGELVGLGYPVGVATVWRIL
HRAGIDPAPRRADTSWRTFLRAQASGLLACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGATKHPTSAWVTQRARNLLMD
LDERSHRFRFLIRDRDTKFTASFDAVFAGAGIDVVRTPPQAPTANAIAERWVGTARRECTDRLLIVSERHLTSVLGSYAE
HFNTHRPHRSLGQHPPDPPPMVTPTSDSTVRRTRILGGLINEYRNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41927; Mature: 41796

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGLGLCRAGWMVMVWSLLYALTRNALGLMLLHVRGDTAKDVELLVLRHQVAVLRRQVN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
RPTLEPADRVILAALSRLLPRARWGSFFVTPATVLRWHREFLARKWTYPRKTPGRPPVRR
CCCCCHHHHHHHHHHHHHHCHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
EIRELVLRLAQENPTWGHRRIQGELVGLGYPVGVATVWRILHRAGIDPAPRRADTSWRTF
HHHHHHHHHHHCCCCCCCCEECCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LRAQASGLLACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGATKHPTSAWVTQRARNLLM
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHH
DLDERSHRFRFLIRDRDTKFTASFDAVFAGAGIDVVRTPPQAPTANAIAERWVGTARREC
HHHCCCCEEEEEEECCCCEEEECHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
TDRLLIVSERHLTSVLGSYAEHFNTHRPHRSLGQHPPDPPPMVTPTSDSTVRRTRILGGL
HHHEEEEHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
INEYRNAA
HHHHCCCC
>Mature Secondary Structure 
PAGLGLCRAGWMVMVWSLLYALTRNALGLMLLHVRGDTAKDVELLVLRHQVAVLRRQVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
RPTLEPADRVILAALSRLLPRARWGSFFVTPATVLRWHREFLARKWTYPRKTPGRPPVRR
CCCCCHHHHHHHHHHHHHHCHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
EIRELVLRLAQENPTWGHRRIQGELVGLGYPVGVATVWRILHRAGIDPAPRRADTSWRTF
HHHHHHHHHHHCCCCCCCCEECCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LRAQASGLLACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGATKHPTSAWVTQRARNLLM
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHH
DLDERSHRFRFLIRDRDTKFTASFDAVFAGAGIDVVRTPPQAPTANAIAERWVGTARREC
HHHCCCCEEEEEEECCCCEEEECHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
TDRLLIVSERHLTSVLGSYAEHFNTHRPHRSLGQHPPDPPPMVTPTSDSTVRRTRILGGL
HHHEEEEHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
INEYRNAA
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA