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The map label for this gene is 158315208

Identifier: 158315208

GI number: 158315208

Start: 4038519

End: 4039307

Strand: Direct

Name: 158315208

Synonym: Franean1_3408

Alternate gene names: NA

Gene position: 4038519-4039307 (Clockwise)

Preceding gene: 158315207

Following gene: 158315212

Centisome position: 44.96

GC content: 67.55

Gene sequence:

>789_bases
ATGGCGGGTGTGCCGACGGACTCTGTTGCATCGGCGGAGTCCGCTGTCCGGCGGCCGTCGATCATTCATGATCGAGTGAT
GCGTCGACGTCGTGTCCGTCCACCGGTTCCGACGTCGGAGTTCGCGGGGTTCCGGTTCCCACCCGAGGTGATCGTCTTGG
CGGTCCGCTGGTACCTCCGGTACGCGCTGTCGTACCGGGATGTCGAGGAGCTGCTCGCCGAACGTGGCCTCGAGGTTGAT
CACGTGACCGTGTACCGGTGGGTGCAGCGCTTTACGCCCCTGCTGGTCGAGGCCGCGCGGCCGTGTCGGCACCGTTCTGG
GGATAGGTGGTTTGTGGATGAGACGTATGTGAAGGTCGCCGGCCGGTGGACCTATGTGTACAGGGCGGTTGACCAGCACG
GGCAGGTCATCGACGTCCTGGCCAGCGCCCGCCGCGACCAGGCTGCGGCACGCCGCTTCTTCGTCCGTGCGCTGTCCCAT
GGGCATCGGCCGGTCGAGGTCACCACCGACAAAGCACCCGTCTACCCACGGGTCCTCGACGAATTCTTGCCCGAGGCGTG
CCACGTCGACGCCGCCCGGGAGAACAATCGGATCGAGGCCGACCACGGCCGGCTCAAAGCCCGGCTCCGGCCGATGCGCG
GCCTGAAACGGCTGCGCTCCGCCCAGACGATCAGCGCAGGGCATGCGTTCGTCCAGAACATCCGCCGCGGCCACTACGAA
CTCGGGATCGACACCGCCCCCCACGCACGGGTGACGGCCGCGTTCACCGAGCTCACCCTCGCGATCTGA

Upstream 100 bases:

>100_bases
GACGGCGCCCGGCTCGACCCCTGCCCCTCCTGTAGCGGCAACGGGCTCGTCGTGGCGGCCGCGGACGAGCTCGCCGTGGT
CAGCTGGACCACGTAGACGT

Downstream 100 bases:

>100_bases
TCATCTGGTCGGCAGGGGGTCATCCATGCCCTGCCTTCCCGCAATGCAACAGACCCGACTCAGGTCCAGACGACGCCGTC
GACCTTGACGCTGAGGCGAA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MAGVPTDSVASAESAVRRPSIIHDRVMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLRYALSYRDVEELLAERGLEVD
HVTVYRWVQRFTPLLVEAARPCRHRSGDRWFVDETYVKVAGRWTYVYRAVDQHGQVIDVLASARRDQAAARRFFVRALSH
GHRPVEVTTDKAPVYPRVLDEFLPEACHVDAARENNRIEADHGRLKARLRPMRGLKRLRSAQTISAGHAFVQNIRRGHYE
LGIDTAPHARVTAAFTELTLAI

Sequences:

>Translated_262_residues
MAGVPTDSVASAESAVRRPSIIHDRVMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLRYALSYRDVEELLAERGLEVD
HVTVYRWVQRFTPLLVEAARPCRHRSGDRWFVDETYVKVAGRWTYVYRAVDQHGQVIDVLASARRDQAAARRFFVRALSH
GHRPVEVTTDKAPVYPRVLDEFLPEACHVDAARENNRIEADHGRLKARLRPMRGLKRLRSAQTISAGHAFVQNIRRGHYE
LGIDTAPHARVTAAFTELTLAI
>Mature_261_residues
AGVPTDSVASAESAVRRPSIIHDRVMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLRYALSYRDVEELLAERGLEVDH
VTVYRWVQRFTPLLVEAARPCRHRSGDRWFVDETYVKVAGRWTYVYRAVDQHGQVIDVLASARRDQAAARRFFVRALSHG
HRPVEVTTDKAPVYPRVLDEFLPEACHVDAARENNRIEADHGRLKARLRPMRGLKRLRSAQTISAGHAFVQNIRRGHYEL
GIDTAPHARVTAAFTELTLAI

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 30035; Mature: 29904

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVPTDSVASAESAVRRPSIIHDRVMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLR
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YALSYRDVEELLAERGLEVDHVTVYRWVQRFTPLLVEAARPCRHRSGDRWFVDETYVKVA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
GRWTYVYRAVDQHGQVIDVLASARRDQAAARRFFVRALSHGHRPVEVTTDKAPVYPRVLD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH
EFLPEACHVDAARENNRIEADHGRLKARLRPMRGLKRLRSAQTISAGHAFVQNIRRGHYE
HHCHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LGIDTAPHARVTAAFTELTLAI
ECCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGVPTDSVASAESAVRRPSIIHDRVMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLR
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YALSYRDVEELLAERGLEVDHVTVYRWVQRFTPLLVEAARPCRHRSGDRWFVDETYVKVA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
GRWTYVYRAVDQHGQVIDVLASARRDQAAARRFFVRALSHGHRPVEVTTDKAPVYPRVLD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH
EFLPEACHVDAARENNRIEADHGRLKARLRPMRGLKRLRSAQTISAGHAFVQNIRRGHYE
HHCHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LGIDTAPHARVTAAFTELTLAI
ECCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]