| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is htpG [H]
Identifier: 158315187
GI number: 158315187
Start: 4011695
End: 4013626
Strand: Reverse
Name: htpG [H]
Synonym: Franean1_3387
Alternate gene names: 158315187
Gene position: 4013626-4011695 (Counterclockwise)
Preceding gene: 158315190
Following gene: 158315182
Centisome position: 44.69
GC content: 65.32
Gene sequence:
>1932_bases GTGAGCAATCGGATCGAGACGCTTGAATTTCAGGCCGAGGCCCGTCAGCTTCTACAACTGATGGTCCATTCGATCTACTC CGACAAAGATATCTTCCTGCGCGAGCTGATCTCCAACGCGTCCGACGCCCTCGACAAGCTGCGCATCGCCTCACTTGTCG ACAAGGACCTTTCGACTGACACGTCAGACCTGCACATCGCCCTCGAGGTCGACCGGGAGCAGCGCACCCTCACCGTGCGC GACAACGGCATCGGCATGTCCCGCGACGACGTCGTCCAGCTCATCGGCACCATTGCCAGGTCGGGAACGGCCGAGATGCT CCGGAAGGCGAAGGAGTCGAAGGACGCCGCCGCGTCGCTGGACCTCATCGGCCAGTTCGGTGTCGGTTTCTACTCGACCT TCATGGTGGCGGACAAGGTCACGCTGCTGACGCGCCGGGCCGGCGAGAGCGGTGGCACGCGCTGGGAGTCGGGCGGCGAG GGCACGTACGTCATCGAGGATGTCGACGACGCGCCGCAGGGCACCGCCGTCACCCTGCATCTCAAGCCGGAGGACAGCGA GGACCACCTCTTCGACTACACCGCCGAGCGGAAGATCCGGGAGATCGTCAAGCGGTACTCCGACTTCATCGCGTGGCCCA TCCGAATGGCTACAGAGAACCCGGACCAGGCAGCGAGCACGGACGAAGACGGCACGGCCACGACCGACATCCAGACGCTC AACTCGATGAAGGCGTTGTGGGCGCGCCCGCCCGCCGAGGTCGACCAGGCCGAGTACAACGAGCTGTACCACCACCTCAG CCATGACTGGACCGACCCGCTCGAGACCATCCGCATGAAGGGTGAAGGCCTCTTCGAGTACGAGGCGCTGCTCTTCATCC CGTCCCACGCGCCGTTCGACCTGTTCGCGCAGGACGGCAAGCGTGGCGTCCAGCTGTACGTGAAGCGCGTGTTCATCATG GACGACTGCCAGGCGCTCATGCCGAACTTCCTGCGGTTTGTCAAGGGTGTCGTCGACGCGCACGACCTGTCGCTGAACAT CTCCCGCGAGATCCTCCAGCAGGACCGCCAGATCCAGCTGGTTCGCCGCCGGCTGGTGAAAAAGGTGCTTTCGACGGTCC GCGGCCTGCAGACGGACGATGCCGAACGCTACCGGACCTTCTGGAAGGAGTTCGGGCCCGTCGTCAAGGAGGGGCTGCTG GACGACGTCGACAACCAGGAGGCGATCCTGGAGATCGTCTCCTGCGCCTCGACGCGCGACCCGGAGCAGACGACGACCCT GCGGGAGTACGTCGACCGGATGAAGGACGGCCAGGACGACATCTACTATATGACCGGCGACTCCCGGTTGATGATCGAGA AGTCGCCACACATCGAGGCCTTCCTCGCCAGGGGGTACGAGGTGCTCCTCCTGACGGACCCGGTCGACGAGGTGTGGGTC GAGCGGGTGGCGCGGTTCGACGGCAAGCCGCTGCGGTCGATCGCCAAGGGCCAGGTCGATCTCGACACCGCGGCCGAGAA GGACAGCACCGAGCCCGAGCGGGAACAGCAGCGGAAGGATTTCGCCGAGCTGCTGTCCTGGCTGACCCGGACCCTGCACG AGCAGGTGAAGGAGGTCCGCCTCTCCTCCCGCCTCACCACGTCGCCGGCCTGCATCGTGGGGGACACCCACGACATCACG CCGACCCTGGAGAAGATGTACCGCTCCATGGGGCAGAACGTGCCGCATTCCAAGCGCATCCTGGAGCTCAATCCGACGCA TCCACTGGTGGAGGGGTTGCGGAAGGCCCACGAGCAGGACGCGAGCTCCGACGTTCTCAGCGAGACGGCGGAGCTGCTGT ACGGGATGGCGCTGCTGGCCGAGGGCGGGGAGCTCGCCGACCCGTCCCGCTTCACCCGCATTCTCGCCGACCGGCTAGCG AACACCCTGTAG
Upstream 100 bases:
>100_bases GCGCCTGATGCTCGACTGAGCGGATGCCGTGCGGGCACTGAACGGGTGCTGCGCGTCGGTATCCTGTTCCGCGAACTGTT CGTGTCCGCATGGAGGTCCC
Downstream 100 bases:
>100_bases GGGGCGTGCACCCGAAACCACGGTGAAGCTCCGCGGGCCCAGGCTCGCGCAGCCGACCTCGGCGCCGGCGACGTGCTCGG CGCCGGGGTCGCCCGTCCGA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 643; Mature: 642
Protein sequence:
>643_residues MSNRIETLEFQAEARQLLQLMVHSIYSDKDIFLRELISNASDALDKLRIASLVDKDLSTDTSDLHIALEVDREQRTLTVR DNGIGMSRDDVVQLIGTIARSGTAEMLRKAKESKDAAASLDLIGQFGVGFYSTFMVADKVTLLTRRAGESGGTRWESGGE GTYVIEDVDDAPQGTAVTLHLKPEDSEDHLFDYTAERKIREIVKRYSDFIAWPIRMATENPDQAASTDEDGTATTDIQTL NSMKALWARPPAEVDQAEYNELYHHLSHDWTDPLETIRMKGEGLFEYEALLFIPSHAPFDLFAQDGKRGVQLYVKRVFIM DDCQALMPNFLRFVKGVVDAHDLSLNISREILQQDRQIQLVRRRLVKKVLSTVRGLQTDDAERYRTFWKEFGPVVKEGLL DDVDNQEAILEIVSCASTRDPEQTTTLREYVDRMKDGQDDIYYMTGDSRLMIEKSPHIEAFLARGYEVLLLTDPVDEVWV ERVARFDGKPLRSIAKGQVDLDTAAEKDSTEPEREQQRKDFAELLSWLTRTLHEQVKEVRLSSRLTTSPACIVGDTHDIT PTLEKMYRSMGQNVPHSKRILELNPTHPLVEGLRKAHEQDASSDVLSETAELLYGMALLAEGGELADPSRFTRILADRLA NTL
Sequences:
>Translated_643_residues MSNRIETLEFQAEARQLLQLMVHSIYSDKDIFLRELISNASDALDKLRIASLVDKDLSTDTSDLHIALEVDREQRTLTVR DNGIGMSRDDVVQLIGTIARSGTAEMLRKAKESKDAAASLDLIGQFGVGFYSTFMVADKVTLLTRRAGESGGTRWESGGE GTYVIEDVDDAPQGTAVTLHLKPEDSEDHLFDYTAERKIREIVKRYSDFIAWPIRMATENPDQAASTDEDGTATTDIQTL NSMKALWARPPAEVDQAEYNELYHHLSHDWTDPLETIRMKGEGLFEYEALLFIPSHAPFDLFAQDGKRGVQLYVKRVFIM DDCQALMPNFLRFVKGVVDAHDLSLNISREILQQDRQIQLVRRRLVKKVLSTVRGLQTDDAERYRTFWKEFGPVVKEGLL DDVDNQEAILEIVSCASTRDPEQTTTLREYVDRMKDGQDDIYYMTGDSRLMIEKSPHIEAFLARGYEVLLLTDPVDEVWV ERVARFDGKPLRSIAKGQVDLDTAAEKDSTEPEREQQRKDFAELLSWLTRTLHEQVKEVRLSSRLTTSPACIVGDTHDIT PTLEKMYRSMGQNVPHSKRILELNPTHPLVEGLRKAHEQDASSDVLSETAELLYGMALLAEGGELADPSRFTRILADRLA NTL >Mature_642_residues SNRIETLEFQAEARQLLQLMVHSIYSDKDIFLRELISNASDALDKLRIASLVDKDLSTDTSDLHIALEVDREQRTLTVRD NGIGMSRDDVVQLIGTIARSGTAEMLRKAKESKDAAASLDLIGQFGVGFYSTFMVADKVTLLTRRAGESGGTRWESGGEG TYVIEDVDDAPQGTAVTLHLKPEDSEDHLFDYTAERKIREIVKRYSDFIAWPIRMATENPDQAASTDEDGTATTDIQTLN SMKALWARPPAEVDQAEYNELYHHLSHDWTDPLETIRMKGEGLFEYEALLFIPSHAPFDLFAQDGKRGVQLYVKRVFIMD DCQALMPNFLRFVKGVVDAHDLSLNISREILQQDRQIQLVRRRLVKKVLSTVRGLQTDDAERYRTFWKEFGPVVKEGLLD DVDNQEAILEIVSCASTRDPEQTTTLREYVDRMKDGQDDIYYMTGDSRLMIEKSPHIEAFLARGYEVLLLTDPVDEVWVE RVARFDGKPLRSIAKGQVDLDTAAEKDSTEPEREQQRKDFAELLSWLTRTLHEQVKEVRLSSRLTTSPACIVGDTHDITP TLEKMYRSMGQNVPHSKRILELNPTHPLVEGLRKAHEQDASSDVLSETAELLYGMALLAEGGELADPSRFTRILADRLAN TL
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI20149594, Length=676, Percent_Identity=36.9822485207101, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI4507677, Length=691, Percent_Identity=35.6005788712012, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI154146191, Length=679, Percent_Identity=35.1988217967599, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI153792590, Length=681, Percent_Identity=35.2422907488987, Blast_Score=408, Evalue=1e-113, Organism=Homo sapiens, GI155722983, Length=627, Percent_Identity=31.2599681020734, Blast_Score=311, Evalue=9e-85, Organism=Escherichia coli, GI1786679, Length=633, Percent_Identity=45.6556082148499, Blast_Score=536, Evalue=1e-153, Organism=Caenorhabditis elegans, GI17559162, Length=677, Percent_Identity=36.6322008862629, Blast_Score=440, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17542208, Length=683, Percent_Identity=34.407027818448, Blast_Score=400, Evalue=1e-111, Organism=Caenorhabditis elegans, GI115535205, Length=652, Percent_Identity=32.361963190184, Blast_Score=322, Evalue=4e-88, Organism=Caenorhabditis elegans, GI115535167, Length=436, Percent_Identity=33.9449541284404, Blast_Score=251, Evalue=7e-67, Organism=Saccharomyces cerevisiae, GI6325016, Length=677, Percent_Identity=36.6322008862629, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6323840, Length=673, Percent_Identity=36.4041604754829, Blast_Score=427, Evalue=1e-120, Organism=Drosophila melanogaster, GI17647529, Length=691, Percent_Identity=35.4558610709117, Blast_Score=442, Evalue=1e-124, Organism=Drosophila melanogaster, GI21357739, Length=688, Percent_Identity=34.593023255814, Blast_Score=403, Evalue=1e-112, Organism=Drosophila melanogaster, GI24586016, Length=632, Percent_Identity=33.5443037974684, Blast_Score=350, Evalue=2e-96,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 72786; Mature: 72655
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRIETLEFQAEARQLLQLMVHSIYSDKDIFLRELISNASDALDKLRIASLVDKDLSTD CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TSDLHIALEVDREQRTLTVRDNGIGMSRDDVVQLIGTIARSGTAEMLRKAKESKDAAASL CCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH DLIGQFGVGFYSTFMVADKVTLLTRRAGESGGTRWESGGEGTYVIEDVDDAPQGTAVTLH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE LKPEDSEDHLFDYTAERKIREIVKRYSDFIAWPIRMATENPDQAASTDEDGTATTDIQTL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHH NSMKALWARPPAEVDQAEYNELYHHLSHDWTDPLETIRMKGEGLFEYEALLFIPSHAPFD HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCHH LFAQDGKRGVQLYVKRVFIMDDCQALMPNFLRFVKGVVDAHDLSLNISREILQQDRQIQL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VRRRLVKKVLSTVRGLQTDDAERYRTFWKEFGPVVKEGLLDDVDNQEAILEIVSCASTRD HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC PEQTTTLREYVDRMKDGQDDIYYMTGDSRLMIEKSPHIEAFLARGYEVLLLTDPVDEVWV CHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCHHHHHHCCEEEEEEECCHHHHHH ERVARFDGKPLRSIAKGQVDLDTAAEKDSTEPEREQQRKDFAELLSWLTRTLHEQVKEVR HHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSRLTTSPACIVGDTHDITPTLEKMYRSMGQNVPHSKRILELNPTHPLVEGLRKAHEQD HHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCC ASSDVLSETAELLYGMALLAEGGELADPSRFTRILADRLANTL CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SNRIETLEFQAEARQLLQLMVHSIYSDKDIFLRELISNASDALDKLRIASLVDKDLSTD CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TSDLHIALEVDREQRTLTVRDNGIGMSRDDVVQLIGTIARSGTAEMLRKAKESKDAAASL CCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH DLIGQFGVGFYSTFMVADKVTLLTRRAGESGGTRWESGGEGTYVIEDVDDAPQGTAVTLH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE LKPEDSEDHLFDYTAERKIREIVKRYSDFIAWPIRMATENPDQAASTDEDGTATTDIQTL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHH NSMKALWARPPAEVDQAEYNELYHHLSHDWTDPLETIRMKGEGLFEYEALLFIPSHAPFD HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCHH LFAQDGKRGVQLYVKRVFIMDDCQALMPNFLRFVKGVVDAHDLSLNISREILQQDRQIQL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VRRRLVKKVLSTVRGLQTDDAERYRTFWKEFGPVVKEGLLDDVDNQEAILEIVSCASTRD HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC PEQTTTLREYVDRMKDGQDDIYYMTGDSRLMIEKSPHIEAFLARGYEVLLLTDPVDEVWV CHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCHHHHHHCCEEEEEEECCHHHHHH ERVARFDGKPLRSIAKGQVDLDTAAEKDSTEPEREQQRKDFAELLSWLTRTLHEQVKEVR HHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSRLTTSPACIVGDTHDITPTLEKMYRSMGQNVPHSKRILELNPTHPLVEGLRKAHEQD HHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCC ASSDVLSETAELLYGMALLAEGGELADPSRFTRILADRLANTL CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA