| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is curA [H]
Identifier: 158315158
GI number: 158315158
Start: 3976243
End: 3977577
Strand: Direct
Name: curA [H]
Synonym: Franean1_3358
Alternate gene names: 158315158
Gene position: 3976243-3977577 (Clockwise)
Preceding gene: 158315157
Following gene: 158315159
Centisome position: 44.27
GC content: 67.72
Gene sequence:
>1335_bases GTGGACGAAGTGAGCGCACAGCCGGCTGACCGTGGCGATCGGGACGTCCTTGTCACCGGAATGGGCTTCTGCCTCCCCGG CGAAGACGGTCCGGTCCTCACCGCCGAGGAGGTGTGGGACATCGCGTCGAACGGGCGTTCCTGCCTGGTCAAGGACGGTA TTTACCACGGTCGGGTCGACCTGGCGCCGGAGATGTTCGAGGAGCGGCTTCCGGAGATTCCCAAGCTGTACTCGGCGCAG CTCACGAAGTCGCACCGCTTCGGGCTTCTCTCCTTCGTGGAGGCCTGCTCGGACGCGAAGATCGATTTTCGGGCGGGCGC CCTGCGTCACGCCGCGATACTCACCGGGCGAGGGGGGCTCGACGACAACGTCGACCCGTATCGGGCCCTGCACGAGGCGA CACCCGAGACGCTTTCCGCGGACGCCGCGACCGCGTTGTTCATCCGGGCCCAGCTCGGCATCACCTCGTACGACGTCACG CTCCTGCAGGCGTCGATCGCCCGGTCGATGGGCCCGAGCTTCACGGTTTCCTGTGGCTGTTCCTCCTCCACCATCCAGCT CGGCAACGCCCTGCGGATGATCGCCGCCGGGGAGGTCGACATCGCGGTCGTCACCGGTGTCGACGCGTTCAGCATGGACC TGATGCGCAACGCGCAGCGGCTTCTGCTCGCCGCGACGCGCGGCGGCCCGCAGCCCGGCGCGGACACCCTGCCCGAGACG CTGCCGTCGATGGACCGGCCGATGCGCCCCTACGACGTCCGCGCCGACTGCGTGAACTTCGGCGAGGGCTCGGTCACCGT GGTCCTGGAGAGCCGCCAGCACGCCGAGTGGCGCGGAGCACACGTCTACGGGCGCCTGATCGCGCAGGCCACCACACGTG ACGGCCTTGCCAGCCCGCTGTCGCTGGACGACTCGGGCGCCTCACTGGTCGCCGCGGTGCGCAAGTGTCTCGGGAACCGC TGGAGCATCGACCAGATTCCGTACATCAACGGTGGCAGCGACGGTGACATGAACGTCACGAACACCGAGGCGAACGCCGT CCGGGAACTGTACGGGACGGCGGTCCCGTCGGTTCTTCTCAGCTCGCAGGAGGCGTGTTTCGGGCACAGCGGGGCCCAGT CCGGAAACCTCGGCCTGGCGTTGACTCTCCTCATGATGGAGAAAAGCCTGGCGTGCCCCACCGCGAACTGTGAGCAGCCG ATCGAGGGCCTGCCTTTCGATCCGATTCCGGGAACGCGGCCGCGGCCGTTGCGGTTCGATCACGCGCTGAGCTTCACCTA CCAGATCGGCGGCCTGAAGAGCGTGATCCTCATGAGTTCCGCCGATGCTTCCTGA
Upstream 100 bases:
>100_bases TCGCTTCGACCAGATAAAGAACACTATGACCGAAATCGTGACTTCTCCCTGATGGTGCGCGATCTTGTGTGTCAAGATGC CGACCATGTTGGAGACCTGA
Downstream 100 bases:
>100_bases CGATGGTTCCTGAATATCTGAAAACCTGAACACCTGCTGAGACCGGCCTGGGACCTCGGTCGGCCGTTTCGCGCGACCGG GGCCGTGTGGCCGATTCGGC
Product: beta-ketoacyl synthase
Products: [acyl carrier protein]; acetoacetyl-ACP; CO2; [acyl carrier protein]; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MDEVSAQPADRGDRDVLVTGMGFCLPGEDGPVLTAEEVWDIASNGRSCLVKDGIYHGRVDLAPEMFEERLPEIPKLYSAQ LTKSHRFGLLSFVEACSDAKIDFRAGALRHAAILTGRGGLDDNVDPYRALHEATPETLSADAATALFIRAQLGITSYDVT LLQASIARSMGPSFTVSCGCSSSTIQLGNALRMIAAGEVDIAVVTGVDAFSMDLMRNAQRLLLAATRGGPQPGADTLPET LPSMDRPMRPYDVRADCVNFGEGSVTVVLESRQHAEWRGAHVYGRLIAQATTRDGLASPLSLDDSGASLVAAVRKCLGNR WSIDQIPYINGGSDGDMNVTNTEANAVRELYGTAVPSVLLSSQEACFGHSGAQSGNLGLALTLLMMEKSLACPTANCEQP IEGLPFDPIPGTRPRPLRFDHALSFTYQIGGLKSVILMSSADAS
Sequences:
>Translated_444_residues MDEVSAQPADRGDRDVLVTGMGFCLPGEDGPVLTAEEVWDIASNGRSCLVKDGIYHGRVDLAPEMFEERLPEIPKLYSAQ LTKSHRFGLLSFVEACSDAKIDFRAGALRHAAILTGRGGLDDNVDPYRALHEATPETLSADAATALFIRAQLGITSYDVT LLQASIARSMGPSFTVSCGCSSSTIQLGNALRMIAAGEVDIAVVTGVDAFSMDLMRNAQRLLLAATRGGPQPGADTLPET LPSMDRPMRPYDVRADCVNFGEGSVTVVLESRQHAEWRGAHVYGRLIAQATTRDGLASPLSLDDSGASLVAAVRKCLGNR WSIDQIPYINGGSDGDMNVTNTEANAVRELYGTAVPSVLLSSQEACFGHSGAQSGNLGLALTLLMMEKSLACPTANCEQP IEGLPFDPIPGTRPRPLRFDHALSFTYQIGGLKSVILMSSADAS >Mature_444_residues MDEVSAQPADRGDRDVLVTGMGFCLPGEDGPVLTAEEVWDIASNGRSCLVKDGIYHGRVDLAPEMFEERLPEIPKLYSAQ LTKSHRFGLLSFVEACSDAKIDFRAGALRHAAILTGRGGLDDNVDPYRALHEATPETLSADAATALFIRAQLGITSYDVT LLQASIARSMGPSFTVSCGCSSSTIQLGNALRMIAAGEVDIAVVTGVDAFSMDLMRNAQRLLLAATRGGPQPGADTLPET LPSMDRPMRPYDVRADCVNFGEGSVTVVLESRQHAEWRGAHVYGRLIAQATTRDGLASPLSLDDSGASLVAAVRKCLGNR WSIDQIPYINGGSDGDMNVTNTEANAVRELYGTAVPSVLLSSQEACFGHSGAQSGNLGLALTLLMMEKSLACPTANCEQP IEGLPFDPIPGTRPRPLRFDHALSFTYQIGGLKSVILMSSADAS
Specific function: Catalyzes The Condensation Reaction Of Fatty Acid Synthesis By The Addition To An Acyl Acceptor Of Two Carbons From Malonyl-Acp. Has A Preference For Short Chain Acid Substrates And May Function To Supply The Octanoic Substrates For Lipoic Acid Biosynthe
COG id: COG0304
COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-ketoacyl-ACP synthases family [H]
Homologues:
Organism=Homo sapiens, GI8923559, Length=283, Percent_Identity=23.321554770318, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1787337, Length=270, Percent_Identity=26.2962962962963, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1788663, Length=272, Percent_Identity=24.6323529411765, Blast_Score=72, Evalue=8e-14, Organism=Drosophila melanogaster, GI24644341, Length=231, Percent_Identity=24.6753246753247, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000794 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C [H]
EC number: 2.3.1.41 [C]
Molecular weight: Translated: 47219; Mature: 47219
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEVSAQPADRGDRDVLVTGMGFCLPGEDGPVLTAEEVWDIASNGRSCLVKDGIYHGRVD CCCCCCCCCCCCCCEEEEEECEEEECCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCC LAPEMFEERLPEIPKLYSAQLTKSHRFGLLSFVEACSDAKIDFRAGALRHAAILTGRGGL CCHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEHHCCHHEEEEEECCCCC DDNVDPYRALHEATPETLSADAATALFIRAQLGITSYDVTLLQASIARSMGPSFTVSCGC CCCCCHHHHHHHCCCCHHCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECC SSSTIQLGNALRMIAAGEVDIAVVTGVDAFSMDLMRNAQRLLLAATRGGPQPGADTLPET CCCCEECCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHH LPSMDRPMRPYDVRADCVNFGEGSVTVVLESRQHAEWRGAHVYGRLIAQATTRDGLASPL HHHCCCCCCCCCCCHHHEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SLDDSGASLVAAVRKCLGNRWSIDQIPYINGGSDGDMNVTNTEANAVRELYGTAVPSVLL CCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHH SSQEACFGHSGAQSGNLGLALTLLMMEKSLACPTANCEQPIEGLPFDPIPGTRPRPLRFD CCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEH HALSFTYQIGGLKSVILMSSADAS HHEEEEEECCCCEEEEEEECCCCC >Mature Secondary Structure MDEVSAQPADRGDRDVLVTGMGFCLPGEDGPVLTAEEVWDIASNGRSCLVKDGIYHGRVD CCCCCCCCCCCCCCEEEEEECEEEECCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCC LAPEMFEERLPEIPKLYSAQLTKSHRFGLLSFVEACSDAKIDFRAGALRHAAILTGRGGL CCHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEHHCCHHEEEEEECCCCC DDNVDPYRALHEATPETLSADAATALFIRAQLGITSYDVTLLQASIARSMGPSFTVSCGC CCCCCHHHHHHHCCCCHHCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECC SSSTIQLGNALRMIAAGEVDIAVVTGVDAFSMDLMRNAQRLLLAATRGGPQPGADTLPET CCCCEECCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHH LPSMDRPMRPYDVRADCVNFGEGSVTVVLESRQHAEWRGAHVYGRLIAQATTRDGLASPL HHHCCCCCCCCCCCHHHEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SLDDSGASLVAAVRKCLGNRWSIDQIPYINGGSDGDMNVTNTEANAVRELYGTAVPSVLL CCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHH SSQEACFGHSGAQSGNLGLALTLLMMEKSLACPTANCEQPIEGLPFDPIPGTRPRPLRFD CCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEH HALSFTYQIGGLKSVILMSSADAS HHEEEEEECCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: None [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.138 {cis-9-hexadecenoyl-ACP}} 0.017 {cis-9-hexadecenoyl-ACP}} 0.012 {cis-3-decenoyl-ACP}} 0.04 {acetyl-ACP}} 0.031 {acetyl-ACP}} [C]
Substrates: acetyl-ACP; malonyl-ACP; acyl-ACP [C]
Specific reaction: acetyl-ACP + malonyl-ACP = [acyl carrier protein] + acetoacetyl-ACP + CO2 acyl-ACP + malonyl-ACP = [acyl carrier protein] + beta-ketoacyl-ACP + CO2 [C]
General reaction: Acyl group transfer [C]
Inhibitor: Acetyl-CoA; Acyl-CoA; Iodoacetamide; N-Ethyl maleimide acyl -ACP-derivatives protect, malonyl-ACP-decarboxylation, Cerulenin [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1644304 [H]