| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315099
Identifier: 158315099
GI number: 158315099
Start: 3910065
End: 3911099
Strand: Direct
Name: 158315099
Synonym: Franean1_3298
Alternate gene names: NA
Gene position: 3910065-3911099 (Clockwise)
Preceding gene: 158315098
Following gene: 158315100
Centisome position: 43.53
GC content: 69.08
Gene sequence:
>1035_bases ATGGCGGATTTACCGCGTCCGTTACGTGTGGTCCAGTGGTGCACCGGCCGTGTCGGCCAGATCGCGATTCGGCATTTCGC GGCCAATCCCGTGTTCGAGCTGGTCGGCGTCTACACGACGACCGCGGCCAAGGACGGTGTGGACGCGGGGACGCTGGCCG GGACCGCCCCGCTCGGGGTGACCGCGACGACCGACAAGGACAAGCTCCTCGCCCTCGAGGCTGACTGCGTGCACTACGCG CCCGCAGGGCCCGATCTCGACGATCTCGAGGCCCTGCTGCGTTCGGGGAAGAACGTCGTCACCCCGCTGGGGTTCACCTT CCCGCGGCCGGAGGATGAGGCGACAGTCCGGCTGCAGGCGGCGTGCCAGGCGGGCGGCAGCAGTTTCCACGCCGGTGGCA TCCATCCAGGTTTCGCCGGTGACGTCTTCGCGCTCGTCGGTTCCCGGCTGCACAGCCGCCTCGACCAGGTGATCGTGTCC GAGGTGGTCGATTTCAGCGGCTCCCCGGCGAGCGACATGCTCACCCGTTTCGGTTTCGGTCGGGAGCCGGCTGAGGCCCA CCGGACGCACCGGCTGGCTCTCGACGCGTACAGCCAGTCCATCGGTCTGCTGGCGGCGGGGCTGGGTCTGACCGTCGACC GCTACGAGTGCAGCCTGACGGTCGCAGTCAGCGACACCGATCTGACCGTCGCCTCGGGGGTCATCCCAGCCGGCAAGGTG GCGGGAATGTGCCGTCGCTGGGAGGCGCTGGTCGACGGGCGCCCCGTGATCGTCTTCCAGTCGAAGTGGAAGATGGCGGA CGGTCTCACCCCGGAGATCGCCACCGGCGCGAGTCGTTATGTCGTCGAGTTCCTGGGAGACCCGGCGACCACGTTCACGA TCGAGGCCGGTCCGTCCGACGGCTCGGCCCATCCCGGTCAGACCTGGACGGCCATGGCGGTCGTCAACCTGATCCACGAC GTCGTCGCCGCCCCGCCCGGCATCCGGACGCACCTCGACCTTCCCGTGGGACAGCCGCGCGGGCTTTTTCACTGA
Upstream 100 bases:
>100_bases TCCGTTGGCAGGGGGCGCCGGAGGGATGATCGAATGTCGCTGACATCGAGTACGGGCCCACGTCATCACCAGGTCCGGCC CGTCCGGAAGGAGATCCTGA
Downstream 100 bases:
>100_bases TGGGGCGCCGGATCCCGAGGATCCCGATCCCGAAGACAAGGGTTCAGAGGAGTATTGAATGTCCATCGAGGACGAGCTCA AGGAACTGCGCCGCGAGGTC
Product: dihydrodipicolinate reductase
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; Oxidoreductase; Dihydropicolinate Reductase
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MADLPRPLRVVQWCTGRVGQIAIRHFAANPVFELVGVYTTTAAKDGVDAGTLAGTAPLGVTATTDKDKLLALEADCVHYA PAGPDLDDLEALLRSGKNVVTPLGFTFPRPEDEATVRLQAACQAGGSSFHAGGIHPGFAGDVFALVGSRLHSRLDQVIVS EVVDFSGSPASDMLTRFGFGREPAEAHRTHRLALDAYSQSIGLLAAGLGLTVDRYECSLTVAVSDTDLTVASGVIPAGKV AGMCRRWEALVDGRPVIVFQSKWKMADGLTPEIATGASRYVVEFLGDPATTFTIEAGPSDGSAHPGQTWTAMAVVNLIHD VVAAPPGIRTHLDLPVGQPRGLFH
Sequences:
>Translated_344_residues MADLPRPLRVVQWCTGRVGQIAIRHFAANPVFELVGVYTTTAAKDGVDAGTLAGTAPLGVTATTDKDKLLALEADCVHYA PAGPDLDDLEALLRSGKNVVTPLGFTFPRPEDEATVRLQAACQAGGSSFHAGGIHPGFAGDVFALVGSRLHSRLDQVIVS EVVDFSGSPASDMLTRFGFGREPAEAHRTHRLALDAYSQSIGLLAAGLGLTVDRYECSLTVAVSDTDLTVASGVIPAGKV AGMCRRWEALVDGRPVIVFQSKWKMADGLTPEIATGASRYVVEFLGDPATTFTIEAGPSDGSAHPGQTWTAMAVVNLIHD VVAAPPGIRTHLDLPVGQPRGLFH >Mature_343_residues ADLPRPLRVVQWCTGRVGQIAIRHFAANPVFELVGVYTTTAAKDGVDAGTLAGTAPLGVTATTDKDKLLALEADCVHYAP AGPDLDDLEALLRSGKNVVTPLGFTFPRPEDEATVRLQAACQAGGSSFHAGGIHPGFAGDVFALVGSRLHSRLDQVIVSE VVDFSGSPASDMLTRFGFGREPAEAHRTHRLALDAYSQSIGLLAAGLGLTVDRYECSLTVAVSDTDLTVASGVIPAGKVA GMCRRWEALVDGRPVIVFQSKWKMADGLTPEIATGASRYVVEFLGDPATTFTIEAGPSDGSAHPGQTWTAMAVVNLIHDV VAAPPGIRTHLDLPVGQPRGLFH
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36140; Mature: 36009
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLPRPLRVVQWCTGRVGQIAIRHFAANPVFELVGVYTTTAAKDGVDAGTLAGTAPLGV CCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE TATTDKDKLLALEADCVHYAPAGPDLDDLEALLRSGKNVVTPLGFTFPRPEDEATVRLQA EEECCCCEEEEEECCEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEE ACQAGGSSFHAGGIHPGFAGDVFALVGSRLHSRLDQVIVSEVVDFSGSPASDMLTRFGFG HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC REPAEAHRTHRLALDAYSQSIGLLAAGLGLTVDRYECSLTVAVSDTDLTVASGVIPAGKV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEHCCCCCCCHHH AGMCRRWEALVDGRPVIVFQSKWKMADGLTPEIATGASRYVVEFLGDPATTFTIEAGPSD HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHHHHHHCCCCEEEEEEECCCC GSAHPGQTWTAMAVVNLIHDVVAAPPGIRTHLDLPVGQPRGLFH CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure ADLPRPLRVVQWCTGRVGQIAIRHFAANPVFELVGVYTTTAAKDGVDAGTLAGTAPLGV CCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE TATTDKDKLLALEADCVHYAPAGPDLDDLEALLRSGKNVVTPLGFTFPRPEDEATVRLQA EEECCCCEEEEEECCEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEE ACQAGGSSFHAGGIHPGFAGDVFALVGSRLHSRLDQVIVSEVVDFSGSPASDMLTRFGFG HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC REPAEAHRTHRLALDAYSQSIGLLAAGLGLTVDRYECSLTVAVSDTDLTVASGVIPAGKV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEHCCCCCCCHHH AGMCRRWEALVDGRPVIVFQSKWKMADGLTPEIATGASRYVVEFLGDPATTFTIEAGPSD HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHHHHHHCCCCEEEEEEECCCC GSAHPGQTWTAMAVVNLIHDVVAAPPGIRTHLDLPVGQPRGLFH CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA