| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315097
Identifier: 158315097
GI number: 158315097
Start: 3907079
End: 3908176
Strand: Direct
Name: 158315097
Synonym: Franean1_3296
Alternate gene names: NA
Gene position: 3907079-3908176 (Clockwise)
Preceding gene: 158315096
Following gene: 158315098
Centisome position: 43.5
GC content: 68.67
Gene sequence:
>1098_bases ATGCCAGACCCGTCCCGCCCTGTCCGTGTTATTCAGTGGTGCACCGGGAAGATCGGCCAGGTCTCCATCCGGCACTTCGC TGCGAACCCGACGTTCGAGCTCGTCGGGGTCTACACGACCTCCACCGGCAAGGAGGGCGTCGACGCGGGCACGCTCGCCG GGATCGGTCCGATCGGCGTTCTCGCCACCACTGACAAGGAAGCGCTCATCGCGCTCGACGCGGACTGCGTGAACTACCTG CCGCTGGCGGTCGACGTCGATGACCTGGAGGCACTGCTGCGTTCGGGGAAGAACGTCGTGACCGCGGTCGGCCTCTCCTT CCCCGCGCCGGACGACCCGCGGACGATCAGGCTTGAGGCCGCCTGCCAGGCGGGCGGGACGACGCTGCACGGCGGCGGCA TCCATCCGGGCTTCGTCGGGGACATCCTCCCGCTCGTCGCCTCCCGCCTGCTGAGCCGCCTCGACCAGGTGGTCGTGACC GAGGTGTGCGATTTCAGCGACCACCCCGGGGCAGATCTGCTCTTCGGTGGTTTCGGTTTCGGCCGTGGCCCGGACGAGGC CCGCGCCAATCCCAGTCCCGTCATGCGGGCCATCGACGGCGACTACGGTGAGTCCATCGCCCAGCTGGTCGCCGCCCTCC GCCTGCCGGTCGACAGATACGAGAGTGAGCTGACGTTCGCCGTCAGTGACAGGGATCTCGCCGTCGCGGCGGGGAAGATC CCCGCCGGCACCGTGGCCGGTATGCGTCACCGCTGGTCCGCGATCGTCGACGGACGTCCTGCCGTGGTCTTCGTCTCCGA ATGGAAGATGGCGGACGGCCTCACGCCCGATATCCGGGAGGGCACCAACCGGTACATCATCGAGTTCTTCGGCGAGCCGG CCACGAAGATCATCCTTGAGCATCTCGAACCCAGTGCGACCGGTGACCCCGGATACCCGGGCCGGATCTGGACCGGCATG TCGGTGGTGAACATGATTCCTGACGTCGTCGCCGCGCCGCCCGGGATCCGCACCCACCTCGACCTGCCGCTGGGCCGTCC GCGTGGGCTCTTCCGTGAGGGCGAGACGTGGCGACGCCCGCTCGTGGAGGCCGACTGA
Upstream 100 bases:
>100_bases CCCGGCGTTCCTCGCTCGGCTCGGCGACCGCGAAACACCCGCCTGCTCGGATTCCTGAGCATTCCGCGACGCCCGTTCTT CATGAACCCGGAGGCGATCG
Downstream 100 bases:
>100_bases CCACCCTCGCCAACCTGCTGATCGACGGCCTCCGGGACGCGAGCTGCGGATGGCGTGCCGAGGGGCGCGGGATCGGCGAC AGAGGTGGCGAGTGCGACGG
Product: dihydrodipicolinate reductase
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; Oxidoreductase; Dihydropicolinate Reductase
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MPDPSRPVRVIQWCTGKIGQVSIRHFAANPTFELVGVYTTSTGKEGVDAGTLAGIGPIGVLATTDKEALIALDADCVNYL PLAVDVDDLEALLRSGKNVVTAVGLSFPAPDDPRTIRLEAACQAGGTTLHGGGIHPGFVGDILPLVASRLLSRLDQVVVT EVCDFSDHPGADLLFGGFGFGRGPDEARANPSPVMRAIDGDYGESIAQLVAALRLPVDRYESELTFAVSDRDLAVAAGKI PAGTVAGMRHRWSAIVDGRPAVVFVSEWKMADGLTPDIREGTNRYIIEFFGEPATKIILEHLEPSATGDPGYPGRIWTGM SVVNMIPDVVAAPPGIRTHLDLPLGRPRGLFREGETWRRPLVEAD
Sequences:
>Translated_365_residues MPDPSRPVRVIQWCTGKIGQVSIRHFAANPTFELVGVYTTSTGKEGVDAGTLAGIGPIGVLATTDKEALIALDADCVNYL PLAVDVDDLEALLRSGKNVVTAVGLSFPAPDDPRTIRLEAACQAGGTTLHGGGIHPGFVGDILPLVASRLLSRLDQVVVT EVCDFSDHPGADLLFGGFGFGRGPDEARANPSPVMRAIDGDYGESIAQLVAALRLPVDRYESELTFAVSDRDLAVAAGKI PAGTVAGMRHRWSAIVDGRPAVVFVSEWKMADGLTPDIREGTNRYIIEFFGEPATKIILEHLEPSATGDPGYPGRIWTGM SVVNMIPDVVAAPPGIRTHLDLPLGRPRGLFREGETWRRPLVEAD >Mature_364_residues PDPSRPVRVIQWCTGKIGQVSIRHFAANPTFELVGVYTTSTGKEGVDAGTLAGIGPIGVLATTDKEALIALDADCVNYLP LAVDVDDLEALLRSGKNVVTAVGLSFPAPDDPRTIRLEAACQAGGTTLHGGGIHPGFVGDILPLVASRLLSRLDQVVVTE VCDFSDHPGADLLFGGFGFGRGPDEARANPSPVMRAIDGDYGESIAQLVAALRLPVDRYESELTFAVSDRDLAVAAGKIP AGTVAGMRHRWSAIVDGRPAVVFVSEWKMADGLTPDIREGTNRYIIEFFGEPATKIILEHLEPSATGDPGYPGRIWTGMS VVNMIPDVVAAPPGIRTHLDLPLGRPRGLFREGETWRRPLVEAD
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38845; Mature: 38713
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPSRPVRVIQWCTGKIGQVSIRHFAANPTFELVGVYTTSTGKEGVDAGTLAGIGPIGV CCCCCCCHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEE LATTDKEALIALDADCVNYLPLAVDVDDLEALLRSGKNVVTAVGLSFPAPDDPRTIRLEA EEECCCCEEEEECCHHHHCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEE ACQAGGTTLHGGGIHPGFVGDILPLVASRLLSRLDQVVVTEVCDFSDHPGADLLFGGFGF ECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC GRGPDEARANPSPVMRAIDGDYGESIAQLVAALRLPVDRYESELTFAVSDRDLAVAAGKI CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCEEEEECCC PAGTVAGMRHRWSAIVDGRPAVVFVSEWKMADGLTPDIREGTNRYIIEFFGEPATKIILE CCCHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHH HLEPSATGDPGYPGRIWTGMSVVNMIPDVVAAPPGIRTHLDLPLGRPRGLFREGETWRRP HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHCC LVEAD CCCCC >Mature Secondary Structure PDPSRPVRVIQWCTGKIGQVSIRHFAANPTFELVGVYTTSTGKEGVDAGTLAGIGPIGV CCCCCCHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEE LATTDKEALIALDADCVNYLPLAVDVDDLEALLRSGKNVVTAVGLSFPAPDDPRTIRLEA EEECCCCEEEEECCHHHHCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEE ACQAGGTTLHGGGIHPGFVGDILPLVASRLLSRLDQVVVTEVCDFSDHPGADLLFGGFGF ECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC GRGPDEARANPSPVMRAIDGDYGESIAQLVAALRLPVDRYESELTFAVSDRDLAVAAGKI CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCEEEEECCC PAGTVAGMRHRWSAIVDGRPAVVFVSEWKMADGLTPDIREGTNRYIIEFFGEPATKIILE CCCHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHH HLEPSATGDPGYPGRIWTGMSVVNMIPDVVAAPPGIRTHLDLPLGRPRGLFREGETWRRP HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHCC LVEAD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA