Click here to switch to the map view.

The map label for this gene is ssuD [C]

Identifier: 158315063

GI number: 158315063

Start: 3859595

End: 3860647

Strand: Direct

Name: ssuD [C]

Synonym: Franean1_3259

Alternate gene names: 158315063

Gene position: 3859595-3860647 (Clockwise)

Preceding gene: 158315059

Following gene: 158315065

Centisome position: 42.97

GC content: 69.14

Gene sequence:

>1053_bases
ATGGCGGCTCCTGCTCCGGCCAGACCGCTCCACAACCACGGCGGGGCCCCAGTCCGCGGAATCCGACTGAAGATCCAGGT
GGTCACGATGAACCAGAAGCCGTTCCGCTTCGCTGTACAGGGCACGCGCGCCACCTCGGGCCGCGAGTGGTACGACCTGG
CCCGCAAGGCTGAGGCCCTCGGGTACTCGACGCTCTTCGTCGCGGACCACTACCTCGGGCCGGGCCCCGCGGCCCGGGCC
TGCAGCATGCCGCCGCAGCACCTGGCGCCGGTCTCGGCGATGGTCGCCGCCGCCGCGGTCACCTCGACCCTGCGGGTCGG
CTGCCGGGTCTTCTGCATCGACTACCACGTGCCCGCGGCCCTGGCGAAGGAGGCCGCGACCATCGATCTGCTCTCCGAGG
GCCGGCTCGAGATGGGTATCGGCGCCGGAGTACAGGTCAACGAGTACAAGGCCCTCGGCATCCCCTTCCTGCCCGGCAAG
GAGCGGGTCGACAAGCTTGAGGAGGTGATCGCCCTGTTCAGGGCGCACTGGTCCGGTGAGCCGATCGACCTCAGCGGCGA
GCACGTCGATGTCCACGGCTACCGGGGGCTGCCGCGGCCCGCCCAGAAGCCGCACATCCCGCTGATGATCGGCGGGAATC
GGAAGCGCATGCTCTCGCTGGCGGCCAGGGAGGCCGACATCGTCAGTATCGGCAACGTGCCCTTCGACCCGCTGAACGCC
TCCGGCCTCACCCCCAGGCAGGAGGCGGTGCACCGGTACGAGGTGGTGCGTGCTGCCGCCGGCGAGCGCCTGGACGAGAT
CGAGATCGAAGGATCGCCCTACTTCACCATTCTGACGGAGGACCGCGATTCGGCGTACAACGAGATCGCCAGCTGGATCT
CGGTCGACGCGTCGGTGCTCCCCGAGCACCCCAACGTTCTGGTCGGCACGCTCGACGAGATGGAGCAGCGGCTGCGCGCC
AACCGGGAGGAGCTCGGCACGAACTATGTGACCGTTCCCCAGAACGCCATCGACACGTTCGCGCCTCTGGCCGAGCGGCT
GCGGGGGAAATGA

Upstream 100 bases:

>100_bases
GGTCACCGCCCTCACGTCTTCTGCTATACAGGTGTTCAGTATCGGAGGCGGTGTGGGCCGCGGGCGCCGCGGCGTGGCCT
TCGAGATCAACAGAGGGCGG

Downstream 100 bases:

>100_bases
GCTGGACGCTACGCCGCCCGCTGACCGGGCGGCGCTACGGCCAGCTGGCGCCCGGCGTTCGCGCCACCGGGCGGTCAGCG
GGCGGACTCGGCGACGAACT

Product: luciferase family protein

Products: an aldehyde; SO3; H2O; FMN [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MAAPAPARPLHNHGGAPVRGIRLKIQVVTMNQKPFRFAVQGTRATSGREWYDLARKAEALGYSTLFVADHYLGPGPAARA
CSMPPQHLAPVSAMVAAAAVTSTLRVGCRVFCIDYHVPAALAKEAATIDLLSEGRLEMGIGAGVQVNEYKALGIPFLPGK
ERVDKLEEVIALFRAHWSGEPIDLSGEHVDVHGYRGLPRPAQKPHIPLMIGGNRKRMLSLAAREADIVSIGNVPFDPLNA
SGLTPRQEAVHRYEVVRAAAGERLDEIEIEGSPYFTILTEDRDSAYNEIASWISVDASVLPEHPNVLVGTLDEMEQRLRA
NREELGTNYVTVPQNAIDTFAPLAERLRGK

Sequences:

>Translated_350_residues
MAAPAPARPLHNHGGAPVRGIRLKIQVVTMNQKPFRFAVQGTRATSGREWYDLARKAEALGYSTLFVADHYLGPGPAARA
CSMPPQHLAPVSAMVAAAAVTSTLRVGCRVFCIDYHVPAALAKEAATIDLLSEGRLEMGIGAGVQVNEYKALGIPFLPGK
ERVDKLEEVIALFRAHWSGEPIDLSGEHVDVHGYRGLPRPAQKPHIPLMIGGNRKRMLSLAAREADIVSIGNVPFDPLNA
SGLTPRQEAVHRYEVVRAAAGERLDEIEIEGSPYFTILTEDRDSAYNEIASWISVDASVLPEHPNVLVGTLDEMEQRLRA
NREELGTNYVTVPQNAIDTFAPLAERLRGK
>Mature_349_residues
AAPAPARPLHNHGGAPVRGIRLKIQVVTMNQKPFRFAVQGTRATSGREWYDLARKAEALGYSTLFVADHYLGPGPAARAC
SMPPQHLAPVSAMVAAAAVTSTLRVGCRVFCIDYHVPAALAKEAATIDLLSEGRLEMGIGAGVQVNEYKALGIPFLPGKE
RVDKLEEVIALFRAHWSGEPIDLSGEHVDVHGYRGLPRPAQKPHIPLMIGGNRKRMLSLAAREADIVSIGNVPFDPLNAS
GLTPRQEAVHRYEVVRAAAGERLDEIEIEGSPYFTILTEDRDSAYNEIASWISVDASVLPEHPNVLVGTLDEMEQRLRAN
REELGTNYVTVPQNAIDTFAPLAERLRGK

Specific function: Involved In Desulfonation Of Aliphatic Sulfonates. Catalyzes The Conversion Of Pentanesulfonic Acid To Sulfite And Pentaldehyde And Is Able To Desulfonate A Wide Range Of Sulfonated Substrates Including C-2 To C-10 Unsubstituted Linear Alkanesulfonates, S

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2161c and Rv3079c [H]

Homologues:

Organism=Escherichia coli, GI1787166, Length=189, Percent_Identity=27.5132275132275, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019921
- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: 1.14.14.5 [C]

Molecular weight: Translated: 38111; Mature: 37980

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPAPARPLHNHGGAPVRGIRLKIQVVTMNQKPFRFAVQGTRATSGREWYDLARKAEAL
CCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHC
GYSTLFVADHYLGPGPAARACSMPPQHLAPVSAMVAAAAVTSTLRVGCRVFCIDYHVPAA
CCEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHH
LAKEAATIDLLSEGRLEMGIGAGVQVNEYKALGIPFLPGKERVDKLEEVIALFRAHWSGE
HHHHHHEEEHHHCCCEEECCCCCCEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
PIDLSGEHVDVHGYRGLPRPAQKPHIPLMIGGNRKRMLSLAAREADIVSIGNVPFDPLNA
CCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCC
SGLTPRQEAVHRYEVVRAAAGERLDEIEIEGSPYFTILTEDRDSAYNEIASWISVDASVL
CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHC
PEHPNVLVGTLDEMEQRLRANREELGTNYVTVPQNAIDTFAPLAERLRGK
CCCCCEEEECHHHHHHHHHCCHHHHCCCEEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAPAPARPLHNHGGAPVRGIRLKIQVVTMNQKPFRFAVQGTRATSGREWYDLARKAEAL
CCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHC
GYSTLFVADHYLGPGPAARACSMPPQHLAPVSAMVAAAAVTSTLRVGCRVFCIDYHVPAA
CCEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHH
LAKEAATIDLLSEGRLEMGIGAGVQVNEYKALGIPFLPGKERVDKLEEVIALFRAHWSGE
HHHHHHEEEHHHCCCEEECCCCCCEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
PIDLSGEHVDVHGYRGLPRPAQKPHIPLMIGGNRKRMLSLAAREADIVSIGNVPFDPLNA
CCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCC
SGLTPRQEAVHRYEVVRAAAGERLDEIEIEGSPYFTILTEDRDSAYNEIASWISVDASVL
CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHC
PEHPNVLVGTLDEMEQRLRANREELGTNYVTVPQNAIDTFAPLAERLRGK
CCCCCEEEECHHHHHHHHHCCHHHHCCCEEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: an alkanesulfonate; O2; FMNH2 [C]

Specific reaction: an alkanesulfonate + O2 + FMNH2 = an aldehyde + SO3 + H2O + FMN [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]