| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cutS [H]
Identifier: 158315015
GI number: 158315015
Start: 3787408
End: 3787824
Strand: Direct
Name: cutS [H]
Synonym: Franean1_3209
Alternate gene names: 158315015
Gene position: 3787408-3787824 (Clockwise)
Preceding gene: 158315014
Following gene: 158315016
Centisome position: 42.17
GC content: 71.22
Gene sequence:
>417_bases GTGGAGCCACGACTCACGCTCGCGGACTTCCTGCGGGAGCACTGCCATCTGACCGGCACGCACCTCGGCTGCGAGCACGG GGTGTGCGGTGCCTGCACGGTGCTGCTGGACGGCGCGGCGGTGCGCGCGTGCCTCGTCCTCGCGGTGCAGGCCGACGGCT CCGAGGTCACCACGATCGAAGGCCTCGGCTCTCCTGACGACCTCTCGCCGGTGCAGGTGGCCTTCCAGGAGAACCACGGC CTGCAGTGCGGGTTCTGCACGCCGGGTTTCGTCGTGTCGGTCACCGCGCTGCTGCGGGACAACCCCGACCCGACCGACGA GGAGATCCGCGCCGGCCTGTCCGGCAACATCTGCCGCTGCACCGGCTACCAGGGGATCTTCAAGGCGGTCCGGGCCGCGG CCGGAAAGACGCCGTGA
Upstream 100 bases:
>100_bases GTGATGGTCGCCCGAGCCTGGCAGCGCGCGGTCCGGGAGGCTCACGATGGATGAAGTCCAGATCAGGCTGCGCGTTAACG GTACGCAACGCCGCGGCCTG
Downstream 100 bases:
>100_bases CCATGTGTCGGTCGTACCGCCGACCTGGTGGGGAGGCCTGCCACCCGGCCCCGGGCGGGTGCCGCGCCGCTCGGCCACAC GTCTCCGCCGGCCCCGTCCC
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MEPRLTLADFLREHCHLTGTHLGCEHGVCGACTVLLDGAAVRACLVLAVQADGSEVTTIEGLGSPDDLSPVQVAFQENHG LQCGFCTPGFVVSVTALLRDNPDPTDEEIRAGLSGNICRCTGYQGIFKAVRAAAGKTP
Sequences:
>Translated_138_residues MEPRLTLADFLREHCHLTGTHLGCEHGVCGACTVLLDGAAVRACLVLAVQADGSEVTTIEGLGSPDDLSPVQVAFQENHG LQCGFCTPGFVVSVTALLRDNPDPTDEEIRAGLSGNICRCTGYQGIFKAVRAAAGKTP >Mature_138_residues MEPRLTLADFLREHCHLTGTHLGCEHGVCGACTVLLDGAAVRACLVLAVQADGSEVTTIEGLGSPDDLSPVQVAFQENHG LQCGFCTPGFVVSVTALLRDNPDPTDEEIRAGLSGNICRCTGYQGIFKAVRAAAGKTP
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=144, Percent_Identity=45.1388888888889, Blast_Score=101, Evalue=2e-22, Organism=Homo sapiens, GI71773480, Length=90, Percent_Identity=47.7777777777778, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1786480, Length=151, Percent_Identity=49.0066225165563, Blast_Score=145, Evalue=9e-37, Organism=Escherichia coli, GI1789232, Length=131, Percent_Identity=48.8549618320611, Blast_Score=116, Evalue=6e-28, Organism=Escherichia coli, GI1789246, Length=110, Percent_Identity=31.8181818181818, Blast_Score=64, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17539860, Length=140, Percent_Identity=47.8571428571429, Blast_Score=142, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17540638, Length=144, Percent_Identity=45.8333333333333, Blast_Score=138, Evalue=8e-34, Organism=Caenorhabditis elegans, GI32566215, Length=147, Percent_Identity=44.2176870748299, Blast_Score=135, Evalue=5e-33, Organism=Drosophila melanogaster, GI17737937, Length=141, Percent_Identity=44.6808510638298, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI24647199, Length=140, Percent_Identity=41.4285714285714, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24647201, Length=140, Percent_Identity=40, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI24647193, Length=142, Percent_Identity=38.7323943661972, Blast_Score=96, Evalue=5e-21, Organism=Drosophila melanogaster, GI24647197, Length=144, Percent_Identity=36.8055555555556, Blast_Score=93, Evalue=6e-20, Organism=Drosophila melanogaster, GI24647195, Length=144, Percent_Identity=36.8055555555556, Blast_Score=93, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 14424; Mature: 14424
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPRLTLADFLREHCHLTGTHLGCEHGVCGACTVLLDGAAVRACLVLAVQADGSEVTTIE CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHEEECCCCEEEEEE GLGSPDDLSPVQVAFQENHGLQCGFCTPGFVVSVTALLRDNPDPTDEEIRAGLSGNICRC CCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEE TGYQGIFKAVRAAAGKTP CCCHHHHHHHHHHCCCCC >Mature Secondary Structure MEPRLTLADFLREHCHLTGTHLGCEHGVCGACTVLLDGAAVRACLVLAVQADGSEVTTIE CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHEEECCCCEEEEEE GLGSPDDLSPVQVAFQENHGLQCGFCTPGFVVSVTALLRDNPDPTDEEIRAGLSGNICRC CCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEE TGYQGIFKAVRAAAGKTP CCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]