| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314745
Identifier: 158314745
GI number: 158314745
Start: 3443619
End: 3444254
Strand: Direct
Name: 158314745
Synonym: Franean1_2926
Alternate gene names: NA
Gene position: 3443619-3444254 (Clockwise)
Preceding gene: 158314744
Following gene: 158314749
Centisome position: 38.34
GC content: 67.92
Gene sequence:
>636_bases TTGATCGGAAACGACGAGGAATGCGTGCTGATCGACGCGCCCCATGACGCGGCAGCGATTCTGGCGGCCATCGGCGACCA GCGGCTTGTCGCGATACTGCTCACGCACGCGCACGACGACCACGTGGGCGCGGCTTTGGACGTCGGCGATGCGACCGAGG CCGAGATCTGGCTGCATCCTGCGGACCGAGCGCTGTGGGACTGTACCCACCCGAATCGCGCGCCGAGTCGGGAAATCGAG CCAGGCCAGAGGTTCACCGTGGGTGGAGCGGACGGGGTCACTCGCCGCGTTCGGCGAGTAGCCGGTACATGGTGCGCTGC GAACACAGGTAGACGCCCTCGTCGAGCAGGGTCGCCCAGACCTGCGCTGGCCCTTCCTGTGCCGCCGGCAATGCGCCGCC CGGGACCGGCCCACCGCCCGGCAGGCCGCGCTCGCACCGATTTCCGGAACGAGTTGGTCGAGGAACGGAGTGAACTCCTC CCAGGCGTTGCGCCACAGGTCGAGTCCGCTCCCTGGCCGTTGGTGACTGACCGGGCGAACTCGGCCGCTTCCTCGATCGA GCCGAATACCGCTGTGGCACCTAATCGCACAGCCGCCTCGCGCTTCAGGGACACAGGATCGACGGCGATCACGTGA
Upstream 100 bases:
>100_bases CGAGCCGGGCCACGGGGGCCGGGTTGGCATCGACCACATCGTCACTTCGGGTACATTCTCGCTTGACGGTGGCTGCTGGC ACGCGGACAACAATGTCTGG
Downstream 100 bases:
>100_bases CCTGCCCCGGCATGCGCGGCGTCCTAGACGGCGTTGATGCCGATCCCGCCCACGCCCATGACAATGACTACCTGACCCGG CGCCACCCGGGCCGCGTTCA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Hydrolase; Hydroxyacylglutathione Hydrolase
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MIGNDEECVLIDAPHDAAAILAAIGDQRLVAILLTHAHDDHVGAALDVGDATEAEIWLHPADRALWDCTHPNRAPSREIE PGQRFTVGGADGVTRRVRRVAGTWCAANTGRRPRRAGSPRPALALPVPPAMRRPGPAHRPAGRARTDFRNELVEERSELL PGVAPQVESAPWPLVTDRANSAASSIEPNTAVAPNRTAASRFRDTGSTAIT
Sequences:
>Translated_211_residues MIGNDEECVLIDAPHDAAAILAAIGDQRLVAILLTHAHDDHVGAALDVGDATEAEIWLHPADRALWDCTHPNRAPSREIE PGQRFTVGGADGVTRRVRRVAGTWCAANTGRRPRRAGSPRPALALPVPPAMRRPGPAHRPAGRARTDFRNELVEERSELL PGVAPQVESAPWPLVTDRANSAASSIEPNTAVAPNRTAASRFRDTGSTAIT >Mature_211_residues MIGNDEECVLIDAPHDAAAILAAIGDQRLVAILLTHAHDDHVGAALDVGDATEAEIWLHPADRALWDCTHPNRAPSREIE PGQRFTVGGADGVTRRVRRVAGTWCAANTGRRPRRAGSPRPALALPVPPAMRRPGPAHRPAGRARTDFRNELVEERSELL PGVAPQVESAPWPLVTDRANSAASSIEPNTAVAPNRTAASRFRDTGSTAIT
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22531; Mature: 22531
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGNDEECVLIDAPHDAAAILAAIGDQRLVAILLTHAHDDHVGAALDVGDATEAEIWLHP CCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEHEECCCCCCCCEEEECCCCCCCEEEEEC ADRALWDCTHPNRAPSREIEPGQRFTVGGADGVTRRVRRVAGTWCAANTGRRPRRAGSPR CCCCEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PALALPVPPAMRRPGPAHRPAGRARTDFRNELVEERSELLPGVAPQVESAPWPLVTDRAN CEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC SAASSIEPNTAVAPNRTAASRFRDTGSTAIT CHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MIGNDEECVLIDAPHDAAAILAAIGDQRLVAILLTHAHDDHVGAALDVGDATEAEIWLHP CCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEHEECCCCCCCCEEEECCCCCCCEEEEEC ADRALWDCTHPNRAPSREIEPGQRFTVGGADGVTRRVRRVAGTWCAANTGRRPRRAGSPR CCCCEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PALALPVPPAMRRPGPAHRPAGRARTDFRNELVEERSELLPGVAPQVESAPWPLVTDRAN CEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC SAASSIEPNTAVAPNRTAASRFRDTGSTAIT CHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA