| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314706
Identifier: 158314706
GI number: 158314706
Start: 3401958
End: 3403133
Strand: Direct
Name: 158314706
Synonym: Franean1_2887
Alternate gene names: NA
Gene position: 3401958-3403133 (Clockwise)
Preceding gene: 158314704
Following gene: 158314709
Centisome position: 37.88
GC content: 69.64
Gene sequence:
>1176_bases ATGCCCGGCTGGATCATGGAGCGCGTGCCGTCCAGTCCCTATGTCATCTGCCTTGACGACGCGCAGCGCGCCGAGCTGGA GTCCTTGTCGCGCCGGGCCACGGCGCCGTTCCGGCTGGTGGTGCGGGCGCGGGTCGTGCTGCTGGCCGCGGACGGGTTAG CGAACTGCAGGATCGCGCAGCGGCTGGGCATCTGCGAGGACACCGTCCGCAAGTGGCGGCGCCGGTACTGCGAGCAGGGC ATAGATGGCCTGGCTGACGCGCCGCGTCCTGGCAGGCCGCGTGTGTTCCCCGCCCGTGTGGTGGCCGGGGTCAAGGCCCT GGCGTGCGAGATGCCCGCCGCGAGCGGGGCGCCGTTGGCCCGCTGGACCTGTCCTGAGCTGGCCCGCCATGCGGCAGCCA GTGGCATCATTCCCGCGCCGTCGGCGTCTACCGTGCGGCGCTGGCTCGCCGATGATGTCCTGAAGCCCTGGCAGCACCGG TCGTGGATCTTTCCCCGCGACCCGCAGTTCGCCGTGAAGGCCGGGCGCGTGCTGGATCTCTACCAGCGGGAGTGGGAAGG ACAGCCACTCGGCCCGGACGAGTACGTCCTCAGCGCCGACGAGAAACCCGGCGTCCAGGCTCGGATGCGTCTGCACCTGC CGCTCCCGCCTGGCCCCGGCCGGGCGATGCGGGCCGAGAGTGAATACCACCGGTACGGCACCCTGGCCTACCTGGCCGCC TACGATGTCCACCACGCGAGGGTGATGGGCCGGTGCGAGCCGTCCACCGGGATAAAGCCGTTCACCGCGCTCGTGGACCA GGTCATGAGCGCTGAGCCGTACGCCTCAGCCAGGCGCGTTTTCTGGGTCGTGGACAACGGAGCCTCGCACCGCAACTGGG CCGCCGCCGACCGCCTGAGCAGCGCCTACCCCAACGCGCAGATGGTCCATCTACCCGTGCACGCCTCCTGGCTGAACCAG GTCGAGGTCTACTTCTCCGTCCTCCAACGCAAGCTGCTCACCCCCGACGACTTCGAGGGCCTGGACGAGCTCGCCACCCA GATCCTCGCCTTCGAGAAGCACTACAACGCCGCCGCCAGACCCTTCGACTGGAAGTTCAGCCGCACCGACCTCAACCAGC TCCTAGCCCGCATCAGAAACCACGACCGGCACGCGCCACATCCGCAGGCCGCATGA
Upstream 100 bases:
>100_bases CGAGCTGGGGCCACCTCTCGGCTGCCCTGCCGATAAGGCGCTGGCGCAGCGAGGTCTTGGTCGACTCCGGTGGCTTGACC ATAGGGCCATCGTGCCTGAC
Downstream 100 bases:
>100_bases ACCCCGACGAATTAACGGTCGCGACCACTAGAGTCGACGCCCACCGCATCCTGGGAAGGGCGCTTTTCGCAGCCCGCAGT GGCGGGGGCCCGGGCAGTTG
Product: putative transposase
Products: NA
Alternate protein names: Integrase Catalytic Region; ISRSO5-Transposase Protein; Feruloyl Esterase; Isrso5-Transposase Protein; ISMsm2 Transposase; ISMsm5 Transposase; Integrase Catalytic Subunit; Aminoglycoside Phosphotransferase; ISPsy1 Transposase; Inactivated Transposase; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MPGWIMERVPSSPYVICLDDAQRAELESLSRRATAPFRLVVRARVVLLAADGLANCRIAQRLGICEDTVRKWRRRYCEQG IDGLADAPRPGRPRVFPARVVAGVKALACEMPAASGAPLARWTCPELARHAAASGIIPAPSASTVRRWLADDVLKPWQHR SWIFPRDPQFAVKAGRVLDLYQREWEGQPLGPDEYVLSADEKPGVQARMRLHLPLPPGPGRAMRAESEYHRYGTLAYLAA YDVHHARVMGRCEPSTGIKPFTALVDQVMSAEPYASARRVFWVVDNGASHRNWAAADRLSSAYPNAQMVHLPVHASWLNQ VEVYFSVLQRKLLTPDDFEGLDELATQILAFEKHYNAAARPFDWKFSRTDLNQLLARIRNHDRHAPHPQAA
Sequences:
>Translated_391_residues MPGWIMERVPSSPYVICLDDAQRAELESLSRRATAPFRLVVRARVVLLAADGLANCRIAQRLGICEDTVRKWRRRYCEQG IDGLADAPRPGRPRVFPARVVAGVKALACEMPAASGAPLARWTCPELARHAAASGIIPAPSASTVRRWLADDVLKPWQHR SWIFPRDPQFAVKAGRVLDLYQREWEGQPLGPDEYVLSADEKPGVQARMRLHLPLPPGPGRAMRAESEYHRYGTLAYLAA YDVHHARVMGRCEPSTGIKPFTALVDQVMSAEPYASARRVFWVVDNGASHRNWAAADRLSSAYPNAQMVHLPVHASWLNQ VEVYFSVLQRKLLTPDDFEGLDELATQILAFEKHYNAAARPFDWKFSRTDLNQLLARIRNHDRHAPHPQAA >Mature_390_residues PGWIMERVPSSPYVICLDDAQRAELESLSRRATAPFRLVVRARVVLLAADGLANCRIAQRLGICEDTVRKWRRRYCEQGI DGLADAPRPGRPRVFPARVVAGVKALACEMPAASGAPLARWTCPELARHAAASGIIPAPSASTVRRWLADDVLKPWQHRS WIFPRDPQFAVKAGRVLDLYQREWEGQPLGPDEYVLSADEKPGVQARMRLHLPLPPGPGRAMRAESEYHRYGTLAYLAAY DVHHARVMGRCEPSTGIKPFTALVDQVMSAEPYASARRVFWVVDNGASHRNWAAADRLSSAYPNAQMVHLPVHASWLNQV EVYFSVLQRKLLTPDDFEGLDELATQILAFEKHYNAAARPFDWKFSRTDLNQLLARIRNHDRHAPHPQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43907; Mature: 43775
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGWIMERVPSSPYVICLDDAQRAELESLSRRATAPFRLVVRARVVLLAADGLANCRIAQ CCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCHHHHHH RLGICEDTVRKWRRRYCEQGIDGLADAPRPGRPRVFPARVVAGVKALACEMPAASGAPLA HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC RWTCPELARHAAASGIIPAPSASTVRRWLADDVLKPWQHRSWIFPRDPQFAVKAGRVLDL CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHCCHHHHH YQREWEGQPLGPDEYVLSADEKPGVQARMRLHLPLPPGPGRAMRAESEYHRYGTLAYLAA HHHHCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH YDVHHARVMGRCEPSTGIKPFTALVDQVMSAEPYASARRVFWVVDNGASHRNWAAADRLS HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH SAYPNAQMVHLPVHASWLNQVEVYFSVLQRKLLTPDDFEGLDELATQILAFEKHYNAAAR HCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC PFDWKFSRTDLNQLLARIRNHDRHAPHPQAA CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PGWIMERVPSSPYVICLDDAQRAELESLSRRATAPFRLVVRARVVLLAADGLANCRIAQ CCHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCHHHHHH RLGICEDTVRKWRRRYCEQGIDGLADAPRPGRPRVFPARVVAGVKALACEMPAASGAPLA HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC RWTCPELARHAAASGIIPAPSASTVRRWLADDVLKPWQHRSWIFPRDPQFAVKAGRVLDL CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHCCHHHHH YQREWEGQPLGPDEYVLSADEKPGVQARMRLHLPLPPGPGRAMRAESEYHRYGTLAYLAA HHHHCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH YDVHHARVMGRCEPSTGIKPFTALVDQVMSAEPYASARRVFWVVDNGASHRNWAAADRLS HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH SAYPNAQMVHLPVHASWLNQVEVYFSVLQRKLLTPDDFEGLDELATQILAFEKHYNAAAR HCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC PFDWKFSRTDLNQLLARIRNHDRHAPHPQAA CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA