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The map label for this gene is ydeP [H]

Identifier: 158314692

GI number: 158314692

Start: 3386077

End: 3386502

Strand: Direct

Name: ydeP [H]

Synonym: Franean1_2871

Alternate gene names: 158314692

Gene position: 3386077-3386502 (Clockwise)

Preceding gene: 158314690

Following gene: 158314698

Centisome position: 37.7

GC content: 67.84

Gene sequence:

>426_bases
ATGTCGGTCACGAACATGGCGGTAACCAGGTCCGGCGGCGATCAGGCCACGCTCGGCCCCTGCGGCGACGACGACTGCGG
CGTCCGTGACGTACTGGACCGGATCGGCGACAAATGGACGGTTCTCGTCGTGGTGGAACTGTCCAAGGGTGTCCGAAGGT
TCCGCGAGCTCCAGCGGGCGATCCCCGGGATCTCCCAGCGCATGCTGACGCTGACCACTCGCCGGCTCTGCAGAGACGGG
ATCGTTCACCGGACGGTCCACGCGACCGTCCCTGCCCAGGTCGACTACCGACTCACGCCCGTCGGCGAGAGCCTCATCAA
CGCGGTGCTCGCGCTCGTGGACTGGTCCCGGGCACATGGGGACGCCATCGCCGCGGCCCGGCTAGCCTGGGACGCGCAGC
AAGGAGACAACTCCACAATCGGCTGA

Upstream 100 bases:

>100_bases
AGGTTCCCGTCACCAGGATCATCAGTGCCTCCCACTGGTTCTGTTCGGTAACCAGCCGACCGTAGACTGAAATGATCAGC
GTCCACAAGGAGGCACTTGA

Downstream 100 bases:

>100_bases
AGCAGTGCCAGCGGGGTTTCCCGATACTCGGACACGTGTCCGTGGTGGTCATGGTTCTCTCAGACTTCCTACTTCATCTA
ATGGGCGATCTCACCGTGGC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSVTNMAVTRSGGDQATLGPCGDDDCGVRDVLDRIGDKWTVLVVVELSKGVRRFRELQRAIPGISQRMLTLTTRRLCRDG
IVHRTVHATVPAQVDYRLTPVGESLINAVLALVDWSRAHGDAIAAARLAWDAQQGDNSTIG

Sequences:

>Translated_141_residues
MSVTNMAVTRSGGDQATLGPCGDDDCGVRDVLDRIGDKWTVLVVVELSKGVRRFRELQRAIPGISQRMLTLTTRRLCRDG
IVHRTVHATVPAQVDYRLTPVGESLINAVLALVDWSRAHGDAIAAARLAWDAQQGDNSTIG
>Mature_140_residues
SVTNMAVTRSGGDQATLGPCGDDDCGVRDVLDRIGDKWTVLVVVELSKGVRRFRELQRAIPGISQRMLTLTTRRLCRDGI
VHRTVHATVPAQVDYRLTPVGESLINAVLALVDWSRAHGDAIAAARLAWDAQQGDNSTIG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=117, Percent_Identity=35.8974358974359, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15292; Mature: 15160

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTNMAVTRSGGDQATLGPCGDDDCGVRDVLDRIGDKWTVLVVVELSKGVRRFRELQRA
CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHH
IPGISQRMLTLTTRRLCRDGIVHRTVHATVPAQVDYRLTPVGESLINAVLALVDWSRAHG
CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCC
DAIAAARLAWDAQQGDNSTIG
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SVTNMAVTRSGGDQATLGPCGDDDCGVRDVLDRIGDKWTVLVVVELSKGVRRFRELQRA
CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHH
IPGISQRMLTLTTRRLCRDGIVHRTVHATVPAQVDYRLTPVGESLINAVLALVDWSRAHG
CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCC
DAIAAARLAWDAQQGDNSTIG
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]