| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is qor [H]
Identifier: 158314684
GI number: 158314684
Start: 3378520
End: 3379497
Strand: Direct
Name: qor [H]
Synonym: Franean1_2863
Alternate gene names: 158314684
Gene position: 3378520-3379497 (Clockwise)
Preceding gene: 158314683
Following gene: 158314685
Centisome position: 37.61
GC content: 69.33
Gene sequence:
>978_bases ATGAGCCAGACCCCGCCCGCCGAGACAGGAGCTGTCCGGATGAGAGCCATCAGCCCGGTGCGTTGGGGCGGCCCCGAAGT GCTGACCGAGATCGAAGTCGATCGACCGGAGCCCAGGCCCACCGAGATCCTCGTCCGCGTGCACGCCGCTGGACTGAATG CGACGGACTGGAAGTCCCGGGCGGCTGGTGGGCTGGGGCTGTGGAGCGACCCGCCGATCCTGGGCCACGACGTCTCCGGC GTCGTCGAGGCGGTGGGACTCGGCGTGACCCTGTACCAGCCCGGCGACGAGGTGTTCGGTATGCCTCTATTCCCGCTGCA GGTCGGCGCCTACGCCGAGTACGTCACCGCCCCGGCCCGCCAGTTCGCCCGCAAGCCGGCGCAGATCGATCACGTAGAGG CCGCCGCGCTGCCGCTGGTCGCGCTGACCGCGTGGCAGGGCCTCACCGAGACGGCGGGCCTGCAACCCGGGCAGCGCGTG CTCATTCACGGCGCCGGGGGCGGTCTCGGCCACGTTGCCGTCCAGATCGCCAAGGCGCGTGGCGGCTATGTGATCGGGAC CGCCAGCGAGGGCAAGCATGCCTTTCTGCGCGGCCTCGGCGCGGACGAACTCATCGACTACCGTACGACCGACTTCGCCG AGGTACTCCAGGACATCGACGTCGTCTTCGACTGCATCGGCGGCGACTACGGGCCGCGTTCGTTGAAGGTGCTGCGCAGC GGCGGCGTTCTCGTGTCGCTGGCATCTCCCGCAGAGGACGGCCTCGTCCCGCAGGCCGCCGAACTCGGCGTCCGCGCCGG CTTCACCCTTGTCGAGCCGGATTACGCCGGCCTACTGGCCATCGCCGATCTCGTACGTGCTGGGCGTTTGCGCGCCAAAA TCGAAACCGTACTCCCCCTGGAGCAGGCCGCGAAGGCGCACGAGATCGGCGAGAGCGGCCACACTACCGGTAAGATCGTG CTCACCGTCAATCGCTGA
Upstream 100 bases:
>100_bases CTCTGGATGAAAAGGAAGTAACTACGACACCCACGCCCCGGTGTGGCTTCGTCGACAGCGAAGTACCGACCAGAAAAGTA CCGAAAGCGAAGGGCAACGA
Downstream 100 bases:
>100_bases CCAACCGGGCAATCATCGGCACCATTCGCCGCGTCGCGGGCCCGGCGTGATCAAGAGAACACACGATGGGCCTGCACTCC GGGTTGAATCCCGCCTCGCC
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSQTPPAETGAVRMRAISPVRWGGPEVLTEIEVDRPEPRPTEILVRVHAAGLNATDWKSRAAGGLGLWSDPPILGHDVSG VVEAVGLGVTLYQPGDEVFGMPLFPLQVGAYAEYVTAPARQFARKPAQIDHVEAAALPLVALTAWQGLTETAGLQPGQRV LIHGAGGGLGHVAVQIAKARGGYVIGTASEGKHAFLRGLGADELIDYRTTDFAEVLQDIDVVFDCIGGDYGPRSLKVLRS GGVLVSLASPAEDGLVPQAAELGVRAGFTLVEPDYAGLLAIADLVRAGRLRAKIETVLPLEQAAKAHEIGESGHTTGKIV LTVNR
Sequences:
>Translated_325_residues MSQTPPAETGAVRMRAISPVRWGGPEVLTEIEVDRPEPRPTEILVRVHAAGLNATDWKSRAAGGLGLWSDPPILGHDVSG VVEAVGLGVTLYQPGDEVFGMPLFPLQVGAYAEYVTAPARQFARKPAQIDHVEAAALPLVALTAWQGLTETAGLQPGQRV LIHGAGGGLGHVAVQIAKARGGYVIGTASEGKHAFLRGLGADELIDYRTTDFAEVLQDIDVVFDCIGGDYGPRSLKVLRS GGVLVSLASPAEDGLVPQAAELGVRAGFTLVEPDYAGLLAIADLVRAGRLRAKIETVLPLEQAAKAHEIGESGHTTGKIV LTVNR >Mature_324_residues SQTPPAETGAVRMRAISPVRWGGPEVLTEIEVDRPEPRPTEILVRVHAAGLNATDWKSRAAGGLGLWSDPPILGHDVSGV VEAVGLGVTLYQPGDEVFGMPLFPLQVGAYAEYVTAPARQFARKPAQIDHVEAAALPLVALTAWQGLTETAGLQPGQRVL IHGAGGGLGHVAVQIAKARGGYVIGTASEGKHAFLRGLGADELIDYRTTDFAEVLQDIDVVFDCIGGDYGPRSLKVLRSG GVLVSLASPAEDGLVPQAAELGVRAGFTLVEPDYAGLLAIADLVRAGRLRAKIETVLPLEQAAKAHEIGESGHTTGKIVL TVNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI47519420, Length=328, Percent_Identity=34.7560975609756, Blast_Score=161, Evalue=7e-40, Organism=Homo sapiens, GI194239674, Length=333, Percent_Identity=30.9309309309309, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI13236495, Length=333, Percent_Identity=30.9309309309309, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI194239676, Length=321, Percent_Identity=32.7102803738318, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI24308257, Length=350, Percent_Identity=28.5714285714286, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI18379349, Length=319, Percent_Identity=31.0344827586207, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI22538446, Length=340, Percent_Identity=30, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI22538444, Length=340, Percent_Identity=30, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI28557745, Length=222, Percent_Identity=33.7837837837838, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI67078404, Length=340, Percent_Identity=26.1764705882353, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI67078406, Length=303, Percent_Identity=26.7326732673267, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI197927207, Length=190, Percent_Identity=29.4736842105263, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1790485, Length=325, Percent_Identity=31.0769230769231, Blast_Score=117, Evalue=7e-28, Organism=Caenorhabditis elegans, GI17507255, Length=323, Percent_Identity=28.4829721362229, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71987554, Length=344, Percent_Identity=27.6162790697674, Blast_Score=94, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6319520, Length=346, Percent_Identity=27.4566473988439, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323729, Length=334, Percent_Identity=26.0479041916168, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323961, Length=209, Percent_Identity=30.622009569378, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324486, Length=201, Percent_Identity=30.8457711442786, Blast_Score=69, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6324195, Length=237, Percent_Identity=28.2700421940928, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI24581339, Length=376, Percent_Identity=29.2553191489362, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24581341, Length=338, Percent_Identity=29.585798816568, Blast_Score=93, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34068; Mature: 33937
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTPPAETGAVRMRAISPVRWGGPEVLTEIEVDRPEPRPTEILVRVHAAGLNATDWKSR CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHH AAGGLGLWSDPPILGHDVSGVVEAVGLGVTLYQPGDEVFGMPLFPLQVGAYAEYVTAPAR CCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCHHCCCCCHHHHHHHHHHHHHHHHH QFARKPAQIDHVEAAALPLVALTAWQGLTETAGLQPGQRVLIHGAGGGLGHVAVQIAKAR HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCHHHHHEEEEECC GGYVIGTASEGKHAFLRGLGADELIDYRTTDFAEVLQDIDVVFDCIGGDYGPRSLKVLRS CCEEEEECCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEEEC GGVLVSLASPAEDGLVPQAAELGVRAGFTLVEPDYAGLLAIADLVRAGRLRAKIETVLPL CCEEEEECCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCH EQAAKAHEIGESGHTTGKIVLTVNR HHHHHHHHCCCCCCCCEEEEEEECC >Mature Secondary Structure SQTPPAETGAVRMRAISPVRWGGPEVLTEIEVDRPEPRPTEILVRVHAAGLNATDWKSR CCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHH AAGGLGLWSDPPILGHDVSGVVEAVGLGVTLYQPGDEVFGMPLFPLQVGAYAEYVTAPAR CCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCHHCCCCCHHHHHHHHHHHHHHHHH QFARKPAQIDHVEAAALPLVALTAWQGLTETAGLQPGQRVLIHGAGGGLGHVAVQIAKAR HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCHHHHHEEEEECC GGYVIGTASEGKHAFLRGLGADELIDYRTTDFAEVLQDIDVVFDCIGGDYGPRSLKVLRS CCEEEEECCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEEEC GGVLVSLASPAEDGLVPQAAELGVRAGFTLVEPDYAGLLAIADLVRAGRLRAKIETVLPL CCEEEEECCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCH EQAAKAHEIGESGHTTGKIVLTVNR HHHHHHHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]