| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is lip2 [H]
Identifier: 158314682
GI number: 158314682
Start: 3375846
End: 3376751
Strand: Direct
Name: lip2 [H]
Synonym: Franean1_2861
Alternate gene names: 158314682
Gene position: 3375846-3376751 (Clockwise)
Preceding gene: 158314681
Following gene: 158314683
Centisome position: 37.58
GC content: 67.66
Gene sequence:
>906_bases ATGGCGCTCGACCCCGCCGCCCTTCGATTTCTCGAGGCGGTCCGCGACATTCCGCAACCCTACGAAATGGCTCTCGCCGA ATTTCGGCGCGCGGGCGAGGACCTGGTCAGAACTTCGGAACCGGAGCCGATCACGAAGGTTGACGAGTTCATCATCCCGG GCGGCGATGGCCAGGAACTCAGGCTGCGCTGCTACGTTCCCGCGCACGAGGGTCCGCGCCCGGTGGTCGTCTGGCTGCAT GGGGGCTCCTTCATCCGGGGATCGCTCGACATGTTCGACGCGATTCGCCGATCCTTCGCGAACGGGACCGGCTGCATCGT GCTCGCGGTGGACCAGCGGCTGTCGCCGGAAGCACAGTTCCCGGCACCGCTGGAGGATGCCTACGCCGCCATCCGGTGGG CCGCGGACAACGCGGACAGCCTCGGCGGAGATCCGAACCGGCTTGGCGTCGGCGGTGAGAGCAGCGGCGGAAACCTGGCC ACGGCCGTCACGCTTCTCGCCCGGAAGCGGGGGGCGCCCCGGCTGGCCTTCCAGGTGCTGGTAACGCCGTTGGTCGACGC CACGGTCGGAAGCGTCTCGGCGCGGGAGTACGGGGAAGGTTACGTGCTGACCCGGCAACAGCTCATTTGGGCCTACGAGC AGTACGCGCCTGGTGTGAGCCGCGTCGATCCGCTGCTGTCTCCCCTGCACGAGCCGCGTCTCGATGGGCTTCCGCCGGCC GTCGTCCTCACCGTCGAATATGACCCGGTGCGTGACGAGGGTGAGCTGTATGCGCGGCGCCTGGCGGCGGAAGGTGTGCC GGTGTCCAGTGCTCGGATCGACGGGTTTCTGCATCACTTTCCCGGTTCGCAGGCCGTCCCGACGTTGGTTCGGCTCACGT GTGGCCTGCTCGAGTTGCTGGAGTAA
Upstream 100 bases:
>100_bases CCCTCGAACTGCGACGAGCCCGTTCCCAGCAGGAAGTTCCGGTGCGACCGCGGGAGTGGGAACGTCGAGTGGTCGACGCC ACGAAGCGGAGGTTGTGAAC
Downstream 100 bases:
>100_bases CCGGTGGTTTCATCCGGAAGGAACGCTCACCATGCCCGGTACCGTTGAGCCGGCCGCGCACCCTGGTTCGCTCCACCGGC CCGCAACGCAGGCCGACCTG
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MALDPAALRFLEAVRDIPQPYEMALAEFRRAGEDLVRTSEPEPITKVDEFIIPGGDGQELRLRCYVPAHEGPRPVVVWLH GGSFIRGSLDMFDAIRRSFANGTGCIVLAVDQRLSPEAQFPAPLEDAYAAIRWAADNADSLGGDPNRLGVGGESSGGNLA TAVTLLARKRGAPRLAFQVLVTPLVDATVGSVSAREYGEGYVLTRQQLIWAYEQYAPGVSRVDPLLSPLHEPRLDGLPPA VVLTVEYDPVRDEGELYARRLAAEGVPVSSARIDGFLHHFPGSQAVPTLVRLTCGLLELLE
Sequences:
>Translated_301_residues MALDPAALRFLEAVRDIPQPYEMALAEFRRAGEDLVRTSEPEPITKVDEFIIPGGDGQELRLRCYVPAHEGPRPVVVWLH GGSFIRGSLDMFDAIRRSFANGTGCIVLAVDQRLSPEAQFPAPLEDAYAAIRWAADNADSLGGDPNRLGVGGESSGGNLA TAVTLLARKRGAPRLAFQVLVTPLVDATVGSVSAREYGEGYVLTRQQLIWAYEQYAPGVSRVDPLLSPLHEPRLDGLPPA VVLTVEYDPVRDEGELYARRLAAEGVPVSSARIDGFLHHFPGSQAVPTLVRLTCGLLELLE >Mature_300_residues ALDPAALRFLEAVRDIPQPYEMALAEFRRAGEDLVRTSEPEPITKVDEFIIPGGDGQELRLRCYVPAHEGPRPVVVWLHG GSFIRGSLDMFDAIRRSFANGTGCIVLAVDQRLSPEAQFPAPLEDAYAAIRWAADNADSLGGDPNRLGVGGESSGGNLAT AVTLLARKRGAPRLAFQVLVTPLVDATVGSVSAREYGEGYVLTRQQLIWAYEQYAPGVSRVDPLLSPLHEPRLDGLPPAV VLTVEYDPVRDEGELYARRLAAEGVPVSSARIDGFLHHFPGSQAVPTLVRLTCGLLELLE
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=336, Percent_Identity=27.6785714285714, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI68299767, Length=201, Percent_Identity=28.3582089552239, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI61966717, Length=343, Percent_Identity=24.4897959183673, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI7662470, Length=128, Percent_Identity=32.8125, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI21328446, Length=99, Percent_Identity=34.3434343434343, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1786682, Length=245, Percent_Identity=31.4285714285714, Blast_Score=96, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71996133, Length=277, Percent_Identity=27.4368231046931, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI72001146, Length=165, Percent_Identity=31.5151515151515, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17540028, Length=179, Percent_Identity=31.2849162011173, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17567059, Length=214, Percent_Identity=27.5700934579439, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24656084, Length=101, Percent_Identity=34.6534653465347, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24656076, Length=101, Percent_Identity=34.6534653465347, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI20130169, Length=101, Percent_Identity=34.6534653465347, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 32600; Mature: 32469
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDPAALRFLEAVRDIPQPYEMALAEFRRAGEDLVRTSEPEPITKVDEFIIPGGDGQEL CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECCCCCCEE RLRCYVPAHEGPRPVVVWLHGGSFIRGSLDMFDAIRRSFANGTGCIVLAVDQRLSPEAQF EEEEEECCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC PAPLEDAYAAIRWAADNADSLGGDPNRLGVGGESSGGNLATAVTLLARKRGAPRLAFQVL CCCHHHHHHHHEECCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH VTPLVDATVGSVSAREYGEGYVLTRQQLIWAYEQYAPGVSRVDPLLSPLHEPRLDGLPPA HHHHHHHHHCCCHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCE VVLTVEYDPVRDEGELYARRLAAEGVPVSSARIDGFLHHFPGSQAVPTLVRLTCGLLELL EEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH E C >Mature Secondary Structure ALDPAALRFLEAVRDIPQPYEMALAEFRRAGEDLVRTSEPEPITKVDEFIIPGGDGQEL CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECCCCCCEE RLRCYVPAHEGPRPVVVWLHGGSFIRGSLDMFDAIRRSFANGTGCIVLAVDQRLSPEAQF EEEEEECCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC PAPLEDAYAAIRWAADNADSLGGDPNRLGVGGESSGGNLATAVTLLARKRGAPRLAFQVL CCCHHHHHHHHEECCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH VTPLVDATVGSVSAREYGEGYVLTRQQLIWAYEQYAPGVSRVDPLLSPLHEPRLDGLPPA HHHHHHHHHCCCHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCE VVLTVEYDPVRDEGELYARRLAAEGVPVSSARIDGFLHHFPGSQAVPTLVRLTCGLLELL EEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]