| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314680
Identifier: 158314680
GI number: 158314680
Start: 3374306
End: 3375382
Strand: Direct
Name: 158314680
Synonym: Franean1_2859
Alternate gene names: NA
Gene position: 3374306-3375382 (Clockwise)
Preceding gene: 158314679
Following gene: 158314681
Centisome position: 37.57
GC content: 64.25
Gene sequence:
>1077_bases ATGATCAACGACGCATTCGTCTTCAACGCGGTCGCGCACGCCTACGACCTTACCGACGAAAACACCCAGCCAAACCGGTA TGCCCACGGTTTACGGGACGCGCTCGTCATGCTACACCGGGACTGGCAGCCGGGCATCGGTCTCGGCGAGTTCGAGCAGC GCACGGACTGGTCGATCGAGACGCTGGCCAGAACGTTGTTTCTCGAGTCCGACGTGGACATGGCGGCCACGCATACGCTC CGACTCGACTCGTATTTCAAGGACGGTCTGTGCGCGCGACACAAGACCGTCGAAGCCGTGCGGCGGTGGCCGCACCGGTT CGTCGGCTACGTGGGCGTCGACCCGACCCTCGGACTCGAGACCTGTCTGCGGGAGCTCGACGAGCAGCTCGACGAGATGC CCGAAGCGGTGGGCCTGAAGCTCTACCCCGCGCAGGTCGAACCCATCCGCAGCTGGCGTATGGATGATCCAAAGCTCGCC TTCCCGCTGTTCGCCCGCGCCCAGGAACGCGGTCTCAGGACGGTTGCCGTCCACAAGGCGTCGCCGCTCGGCCCAGTGCC GATGAACCCGTTCCACCTCGATGACATCGACAACGCCGCGGACGCCTTTCCCGATCTCTCGTTCGAGATCGTCCACGCCG GACTGGCGTTCGCCGAGGAGGCGGCACTCGCGATCGCCCGCTACCCGAACGTCTACGCTAACCTCGAGGTCACGTCCGTC CTCCTCACCAAGAGTCCGGGGGTGTTCGAGCAGACGCTGGCAAAGTTGATCTTCTGGGGTGGCCCCAGTAAGCTGATCTA CTCTGACGGCAGCATGGTCTTTCACTCGCAGCCGATCATCAGGGCCCTCAGCGAGTTCTCCTTCAGCGAGGAGACCCTCG CCGCCTGGGGAATCCCGCAACTTACCGCCGAGGACCGGGCGTTGATTCTTGGTGGCAACTACGCCCGCATACTCGGGATC GACATCGAGGCCGCGAAGGCGCGGATAGCCGATGACGAGTTCGCCAGGGAAAAGGCCCGAACGGGGATTCAGGCACCCTA CTCCAACTGGAAGGCCGCGCTCGAGGCCGCGGCATGA
Upstream 100 bases:
>100_bases TCGATGACGCCGTGGCCGAAGCGTCCGTGCGCGGTATCTACGTCGAGGGTATTGAAATACTGCAGGGCCGCTTCGGCGCC TGAGTGAAAGGAAACAGGGA
Downstream 100 bases:
>100_bases ACGCGCCGGGCAGCGCGTTCGACAATGCCAATATCAGCAATGCCAAGGCGCTCGACCAAGCCGATGAGCTCGGCCGGGCC GTCGACACAGCACTGCGCTC
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Metal-Dependent Hydrolase Of TIM-Barrel Fold Protein
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MINDAFVFNAVAHAYDLTDENTQPNRYAHGLRDALVMLHRDWQPGIGLGEFEQRTDWSIETLARTLFLESDVDMAATHTL RLDSYFKDGLCARHKTVEAVRRWPHRFVGYVGVDPTLGLETCLRELDEQLDEMPEAVGLKLYPAQVEPIRSWRMDDPKLA FPLFARAQERGLRTVAVHKASPLGPVPMNPFHLDDIDNAADAFPDLSFEIVHAGLAFAEEAALAIARYPNVYANLEVTSV LLTKSPGVFEQTLAKLIFWGGPSKLIYSDGSMVFHSQPIIRALSEFSFSEETLAAWGIPQLTAEDRALILGGNYARILGI DIEAAKARIADDEFAREKARTGIQAPYSNWKAALEAAA
Sequences:
>Translated_358_residues MINDAFVFNAVAHAYDLTDENTQPNRYAHGLRDALVMLHRDWQPGIGLGEFEQRTDWSIETLARTLFLESDVDMAATHTL RLDSYFKDGLCARHKTVEAVRRWPHRFVGYVGVDPTLGLETCLRELDEQLDEMPEAVGLKLYPAQVEPIRSWRMDDPKLA FPLFARAQERGLRTVAVHKASPLGPVPMNPFHLDDIDNAADAFPDLSFEIVHAGLAFAEEAALAIARYPNVYANLEVTSV LLTKSPGVFEQTLAKLIFWGGPSKLIYSDGSMVFHSQPIIRALSEFSFSEETLAAWGIPQLTAEDRALILGGNYARILGI DIEAAKARIADDEFAREKARTGIQAPYSNWKAALEAAA >Mature_358_residues MINDAFVFNAVAHAYDLTDENTQPNRYAHGLRDALVMLHRDWQPGIGLGEFEQRTDWSIETLARTLFLESDVDMAATHTL RLDSYFKDGLCARHKTVEAVRRWPHRFVGYVGVDPTLGLETCLRELDEQLDEMPEAVGLKLYPAQVEPIRSWRMDDPKLA FPLFARAQERGLRTVAVHKASPLGPVPMNPFHLDDIDNAADAFPDLSFEIVHAGLAFAEEAALAIARYPNVYANLEVTSV LLTKSPGVFEQTLAKLIFWGGPSKLIYSDGSMVFHSQPIIRALSEFSFSEETLAAWGIPQLTAEDRALILGGNYARILGI DIEAAKARIADDEFAREKARTGIQAPYSNWKAALEAAA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39855; Mature: 39855
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINDAFVFNAVAHAYDLTDENTQPNRYAHGLRDALVMLHRDWQPGIGLGEFEQRTDWSIE CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH TLARTLFLESDVDMAATHTLRLDSYFKDGLCARHKTVEAVRRWPHRFVGYVGVDPTLGLE HHHHHHHHCCCCCHHHHEEEEEHHHHHCCHHHHHHHHHHHHHCHHHHHEEECCCCCCCHH TCLRELDEQLDEMPEAVGLKLYPAQVEPIRSWRMDDPKLAFPLFARAQERGLRTVAVHKA HHHHHHHHHHHHHHHHHCCEEECCCCCHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECC SPLGPVPMNPFHLDDIDNAADAFPDLSFEIVHAGLAFAEEAALAIARYPNVYANLEVTSV CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEE LLTKSPGVFEQTLAKLIFWGGPSKLIYSDGSMVFHSQPIIRALSEFSFSEETLAAWGIPQ EEECCCCHHHHHHHHHEECCCCCEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHCCCCC LTAEDRALILGGNYARILGIDIEAAKARIADDEFAREKARTGIQAPYSNWKAALEAAA CCCCCCEEEEECCEEEEEEEEHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MINDAFVFNAVAHAYDLTDENTQPNRYAHGLRDALVMLHRDWQPGIGLGEFEQRTDWSIE CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH TLARTLFLESDVDMAATHTLRLDSYFKDGLCARHKTVEAVRRWPHRFVGYVGVDPTLGLE HHHHHHHHCCCCCHHHHEEEEEHHHHHCCHHHHHHHHHHHHHCHHHHHEEECCCCCCCHH TCLRELDEQLDEMPEAVGLKLYPAQVEPIRSWRMDDPKLAFPLFARAQERGLRTVAVHKA HHHHHHHHHHHHHHHHHCCEEECCCCCHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECC SPLGPVPMNPFHLDDIDNAADAFPDLSFEIVHAGLAFAEEAALAIARYPNVYANLEVTSV CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEE LLTKSPGVFEQTLAKLIFWGGPSKLIYSDGSMVFHSQPIIRALSEFSFSEETLAAWGIPQ EEECCCCHHHHHHHHHEECCCCCEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHCCCCC LTAEDRALILGGNYARILGIDIEAAKARIADDEFAREKARTGIQAPYSNWKAALEAAA CCCCCCEEEEECCEEEEEEEEHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA