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The map label for this gene is 158314671

Identifier: 158314671

GI number: 158314671

Start: 3365616

End: 3366251

Strand: Direct

Name: 158314671

Synonym: Franean1_2850

Alternate gene names: NA

Gene position: 3365616-3366251 (Clockwise)

Preceding gene: 158314670

Following gene: 158314674

Centisome position: 37.47

GC content: 67.77

Gene sequence:

>636_bases
ATGATGCGTCGACGTCGTGTCCGTCCACCGGTTCCGACGTCGGAGTTCGCCGGGTTCCGCTTCCCTCCCGAGGTGATCGT
CCTGGCGGTGCGGTGGTACCTGCGCTACGCCTTGTCCTACCGGGATGTGGAGGAGCTGCTTGCCGAACGCGGCCTCGAGG
TTGATCACGTCACGGTCTACCGGTGGGTGCGCCGGTTCACCCCGCTGCTGATCGACGCGGCCCGGCCATGCTGGCACACA
CCGGGTGATCGTTGGTTCGTCGACGAAACGTATGTGAAGGTCGCCGGACGATGGACCTATCTGTACCGGACCGTCGACCA
GTTCGGCCAGGTCATCGATGTGCTGGCCTCCGAGAAGCGGGATCTCGCCGCGGCCCGCCGGTTCTTTACCCGCGCCCTGT
CCCACGGCCGGCGGCCCGTCGAGGTGACCACCGACCGGGCCGCCTCCTACCCACGAGTCCTCGACGAACAGCTCCCCGCC
GCTCATCACGTCGACGACCAGTACGGGCACAGTTGCATTGGGCGGAGGCGGGGCGTGGTGGAGCGGTCTCGGGCGGGCGG
TCAGATGGCCAGGGTGAGCTCGGTGAAGGCAGCCGTCAGCCGGTTCCGGAGGTCGGCATCGACGCCCAGTTCGTAG

Upstream 100 bases:

>100_bases
GACGCCGAATGGGTTGTCACCGCAGACGGTCTCGACACGTCGGACGGCACTGTTGCGTTGGCGAAGTCCGCCATCTCGGC
TCCCGACCGGTCATGATCGA

Downstream 100 bases:

>100_bases
TGGCCGCGGCGGATGTTCTGCACGAACGCGTGCCCGGAGCCGATGATCTGTGCGGAGAGGAGGCCTTTCAGGCCGCGCAT
CGGCCGTAGTCGTGCCTTGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLRYALSYRDVEELLAERGLEVDHVTVYRWVRRFTPLLIDAARPCWHT
PGDRWFVDETYVKVAGRWTYLYRTVDQFGQVIDVLASEKRDLAAARRFFTRALSHGRRPVEVTTDRAASYPRVLDEQLPA
AHHVDDQYGHSCIGRRRGVVERSRAGGQMARVSSVKAAVSRFRRSASTPSS

Sequences:

>Translated_211_residues
MMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLRYALSYRDVEELLAERGLEVDHVTVYRWVRRFTPLLIDAARPCWHT
PGDRWFVDETYVKVAGRWTYLYRTVDQFGQVIDVLASEKRDLAAARRFFTRALSHGRRPVEVTTDRAASYPRVLDEQLPA
AHHVDDQYGHSCIGRRRGVVERSRAGGQMARVSSVKAAVSRFRRSASTPSS
>Mature_211_residues
MMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLRYALSYRDVEELLAERGLEVDHVTVYRWVRRFTPLLIDAARPCWHT
PGDRWFVDETYVKVAGRWTYLYRTVDQFGQVIDVLASEKRDLAAARRFFTRALSHGRRPVEVTTDRAASYPRVLDEQLPA
AHHVDDQYGHSCIGRRRGVVERSRAGGQMARVSSVKAAVSRFRRSASTPSS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 24434; Mature: 24434

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLRYALSYRDVEELLAERGLEVDHVTVY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RWVRRFTPLLIDAARPCWHTPGDRWFVDETYVKVAGRWTYLYRTVDQFGQVIDVLASEKR
HHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLAAARRFFTRALSHGRRPVEVTTDRAASYPRVLDEQLPAAHHVDDQYGHSCIGRRRGVV
HHHHHHHHHHHHHHCCCCCEEEECCHHHCCHHHHHHHCCCHHCCCHHHHHHHHHHHHCHH
ERSRAGGQMARVSSVKAAVSRFRRSASTPSS
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMRRRRVRPPVPTSEFAGFRFPPEVIVLAVRWYLRYALSYRDVEELLAERGLEVDHVTVY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RWVRRFTPLLIDAARPCWHTPGDRWFVDETYVKVAGRWTYLYRTVDQFGQVIDVLASEKR
HHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLAAARRFFTRALSHGRRPVEVTTDRAASYPRVLDEQLPAAHHVDDQYGHSCIGRRRGVV
HHHHHHHHHHHHHHCCCCCEEEECCHHHCCHHHHHHHCCCHHCCCHHHHHHHHHHHHCHH
ERSRAGGQMARVSSVKAAVSRFRRSASTPSS
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]