Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314600

Identifier: 158314600

GI number: 158314600

Start: 3286458

End: 3286979

Strand: Direct

Name: 158314600

Synonym: Franean1_2779

Alternate gene names: NA

Gene position: 3286458-3286979 (Clockwise)

Preceding gene: 158314599

Following gene: 158314603

Centisome position: 36.59

GC content: 67.62

Gene sequence:

>522_bases
GTGAACGCTGACACCTGGACGCTCGTCGAGGACATCACCAGCCGCGTGCAGCGCGCCCTGCGTGTCGGGGACTACCCCGC
CATCCTGGGACTCCAGGGCGATCGGAACCTGTTCCTCAGCGACTATCCCTATCTGACCAGCTGGGCGACCGCCCTCGCCT
TCGAGATCCGCGCCGCCGCCACCGCCAAAGCCATCCACAGCCACCGCTGGGTCCTCGCCGTACCCCAGGTCTGGTACGAC
AACGGCGAGATCATCCAGGCCCGGCCGCTGTACACTGCGCCGATTCAGCCCGGCGAAACCGAAACGATCAGCTGGATGAG
CTACGACGCCACGGACGGCGTCGACTACGGCCGCATCGAGTTCGCCCGCCGACCTGACGGCCAGCCCATCTTTGACGACC
TCGAATACTTCACCAGCCCCGTCCAGCCCCTGCCCCGCCATCCCGGCGGCGCCCTGCACCGCCTCCTGGTCGCCGACATC
GACCTCAGCGAGATCACCCCATCCCTGCCCACACGACGCTGA

Upstream 100 bases:

>100_bases
GGACGGTCGGGACGACGCCCGCCCCGCATGAACAAGTAGAGGCCCGATACCGGCAGGGCCGGCCCTGCCGGACGTGGGAA
TCACCGGAGAGGACTGTGCC

Downstream 100 bases:

>100_bases
CCACATCGCACCCAGTGCGGACCGGGAGGGGATGGGCTGGCACCGGCAGTTCGCTCACTTCGCTCTGACGGCCTCGCCTT
GAGTTGTTTCGCCTACAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MNADTWTLVEDITSRVQRALRVGDYPAILGLQGDRNLFLSDYPYLTSWATALAFEIRAAATAKAIHSHRWVLAVPQVWYD
NGEIIQARPLYTAPIQPGETETISWMSYDATDGVDYGRIEFARRPDGQPIFDDLEYFTSPVQPLPRHPGGALHRLLVADI
DLSEITPSLPTRR

Sequences:

>Translated_173_residues
MNADTWTLVEDITSRVQRALRVGDYPAILGLQGDRNLFLSDYPYLTSWATALAFEIRAAATAKAIHSHRWVLAVPQVWYD
NGEIIQARPLYTAPIQPGETETISWMSYDATDGVDYGRIEFARRPDGQPIFDDLEYFTSPVQPLPRHPGGALHRLLVADI
DLSEITPSLPTRR
>Mature_173_residues
MNADTWTLVEDITSRVQRALRVGDYPAILGLQGDRNLFLSDYPYLTSWATALAFEIRAAATAKAIHSHRWVLAVPQVWYD
NGEIIQARPLYTAPIQPGETETISWMSYDATDGVDYGRIEFARRPDGQPIFDDLEYFTSPVQPLPRHPGGALHRLLVADI
DLSEITPSLPTRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19481; Mature: 19481

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNADTWTLVEDITSRVQRALRVGDYPAILGLQGDRNLFLSDYPYLTSWATALAFEIRAAA
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHH
TAKAIHSHRWVLAVPQVWYDNGEIIQARPLYTAPIQPGETETISWMSYDATDGVDYGRIE
HHHHHHCCCEEEEECEEEECCCCEEEECCCEECCCCCCCCCEEEEEEECCCCCCCCCEEE
FARRPDGQPIFDDLEYFTSPVQPLPRHPGGALHRLLVADIDLSEITPSLPTRR
EEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MNADTWTLVEDITSRVQRALRVGDYPAILGLQGDRNLFLSDYPYLTSWATALAFEIRAAA
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHH
TAKAIHSHRWVLAVPQVWYDNGEIIQARPLYTAPIQPGETETISWMSYDATDGVDYGRIE
HHHHHHCCCEEEEECEEEECCCCEEEECCCEECCCCCCCCCEEEEEEECCCCCCCCCEEE
FARRPDGQPIFDDLEYFTSPVQPLPRHPGGALHRLLVADIDLSEITPSLPTRR
EEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA