| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is caiD [C]
Identifier: 158314515
GI number: 158314515
Start: 3184418
End: 3185251
Strand: Direct
Name: caiD [C]
Synonym: Franean1_2691
Alternate gene names: 158314515
Gene position: 3184418-3185251 (Clockwise)
Preceding gene: 158314514
Following gene: 158314516
Centisome position: 35.45
GC content: 70.74
Gene sequence:
>834_bases GTGAGTCTGACCTGCTTCGACGTTCGCTACGAAGACGGCGTCGCGCATCTGCGGCTCAACCGGCCCGACCAGAAGAACTC GCTGATCCCGTCGTTCTGGGCCGAGCTGCGGACGCTGGTGACCGACATCGACCGCGAGGCGCGCGCCCGCGTGATCGTCA TCTCGTCGACCGGCCGGCACTTCTGCGCCGGCCTCGACCTCGGTGTGTTCGTCGGTGGGATGTTCCGGGCGGGCGGCGGC GGTGACGAGCCCGGCCGCAAGCGGGCGGTGCTCTACCAGGGCATCCGCGTGTTGCAGGAGACGTTCACCGCGCTGGAACG GGCCCGGCTCCCGGTGATCGCCGCGATCCAGGGCGGCTGCGTCGGCGCGGGGCTCGGCATGGTCTCGGCCTGCGACCTGC GCTACGCCACCCGCGACGCGTTCTTTCTGGTCCAGGAGACGAACCTCGGCATCACCGCGGAGGTGGGCCAGCTGCAGCGG CTGCCGAAGGTGATGCCGGAGGGCATCGTCCGGGAGATGGCCTACCGCGGGATGCGCCTACCGGCCGCGCGGGCGGAGGC GGTCGGATTCGTCAACGCCGTGTTCGACGACCACGACACACTCCTGGCCGCCGTTTCGGAGATCGCGCGTGAGATCGCGT CGAAGAGCCCGCTGGCGGTCTGGGGCACCAAGCACTCGCTCCATCACGCCCGGGACCACGCCGTCGACGACGGGCTCGAC CTCGTCGCGCTGTGGCAGGCCGGGATGTACCACCCGGACGACTGCCTGGAGAGCCTGTGCGCCCAGAAGGACCAGCGCAC GCCGGTCTTCGAGGACCTCCGACCGGCCCCCTGA
Upstream 100 bases:
>100_bases GGTTCGGCCGGCTCGTGACCGGTCTACGTCTCAACGTGCCCTATGCGGACGACCCCGACGTCTGGACGCCGGTGATTACC AAGATCAAGGAGTCCGCCCT
Downstream 100 bases:
>100_bases CGGCCCCAGCCGTCCGGATGGCTGAGACTGCGACGGAAGGAAACCTGACGTGACTGACCAACGCCCCATCGACGCCGACA ACCACTACTACGAGCCGCTG
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSLTCFDVRYEDGVAHLRLNRPDQKNSLIPSFWAELRTLVTDIDREARARVIVISSTGRHFCAGLDLGVFVGGMFRAGGG GDEPGRKRAVLYQGIRVLQETFTALERARLPVIAAIQGGCVGAGLGMVSACDLRYATRDAFFLVQETNLGITAEVGQLQR LPKVMPEGIVREMAYRGMRLPAARAEAVGFVNAVFDDHDTLLAAVSEIAREIASKSPLAVWGTKHSLHHARDHAVDDGLD LVALWQAGMYHPDDCLESLCAQKDQRTPVFEDLRPAP
Sequences:
>Translated_277_residues MSLTCFDVRYEDGVAHLRLNRPDQKNSLIPSFWAELRTLVTDIDREARARVIVISSTGRHFCAGLDLGVFVGGMFRAGGG GDEPGRKRAVLYQGIRVLQETFTALERARLPVIAAIQGGCVGAGLGMVSACDLRYATRDAFFLVQETNLGITAEVGQLQR LPKVMPEGIVREMAYRGMRLPAARAEAVGFVNAVFDDHDTLLAAVSEIAREIASKSPLAVWGTKHSLHHARDHAVDDGLD LVALWQAGMYHPDDCLESLCAQKDQRTPVFEDLRPAP >Mature_276_residues SLTCFDVRYEDGVAHLRLNRPDQKNSLIPSFWAELRTLVTDIDREARARVIVISSTGRHFCAGLDLGVFVGGMFRAGGGG DEPGRKRAVLYQGIRVLQETFTALERARLPVIAAIQGGCVGAGLGMVSACDLRYATRDAFFLVQETNLGITAEVGQLQRL PKVMPEGIVREMAYRGMRLPAARAEAVGFVNAVFDDHDTLLAAVSEIAREIASKSPLAVWGTKHSLHHARDHAVDDGLDL VALWQAGMYHPDDCLESLCAQKDQRTPVFEDLRPAP
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=264, Percent_Identity=40.530303030303, Blast_Score=197, Evalue=6e-51, Organism=Homo sapiens, GI221136756, Length=218, Percent_Identity=26.605504587156, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI221136753, Length=218, Percent_Identity=26.605504587156, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI221307494, Length=218, Percent_Identity=26.605504587156, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI194097323, Length=262, Percent_Identity=25.5725190839695, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4502327, Length=263, Percent_Identity=28.8973384030418, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4757966, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI51538581, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI25453481, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI51538573, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI116235487, Length=189, Percent_Identity=23.8095238095238, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI260274832, Length=190, Percent_Identity=27.8947368421053, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI45643119, Length=190, Percent_Identity=27.8947368421053, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI260275230, Length=190, Percent_Identity=27.8947368421053, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4757968, Length=191, Percent_Identity=26.1780104712042, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI49355787, Length=191, Percent_Identity=26.1780104712042, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI221142681, Length=263, Percent_Identity=27.3764258555133, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787659, Length=264, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787660, Length=260, Percent_Identity=27.6923076923077, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788682, Length=224, Percent_Identity=29.4642857142857, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI87082183, Length=273, Percent_Identity=24.9084249084249, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17534483, Length=264, Percent_Identity=34.8484848484849, Blast_Score=178, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17536985, Length=262, Percent_Identity=33.587786259542, Blast_Score=177, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17540714, Length=257, Percent_Identity=28.7937743190661, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25145438, Length=260, Percent_Identity=27.6923076923077, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17554946, Length=265, Percent_Identity=26.0377358490566, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17558304, Length=239, Percent_Identity=26.3598326359833, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25144276, Length=254, Percent_Identity=26.7716535433071, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17508951, Length=255, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508953, Length=255, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI19920382, Length=263, Percent_Identity=36.8821292775665, Blast_Score=176, Evalue=1e-44, Organism=Drosophila melanogaster, GI24653139, Length=263, Percent_Identity=28.1368821292776, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI20129971, Length=259, Percent_Identity=25.4826254826255, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24653477, Length=259, Percent_Identity=25.4826254826255, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24583165, Length=236, Percent_Identity=25.4237288135593, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI19921000, Length=194, Percent_Identity=28.8659793814433, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 30310; Mature: 30179
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTCFDVRYEDGVAHLRLNRPDQKNSLIPSFWAELRTLVTDIDREARARVIVISSTGRH CCEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHCEEEEEEECCCCH FCAGLDLGVFVGGMFRAGGGGDEPGRKRAVLYQGIRVLQETFTALERARLPVIAAIQGGC HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC VGAGLGMVSACDLRYATRDAFFLVQETNLGITAEVGQLQRLPKVMPEGIVREMAYRGMRL HHHCCCHHHHHHHHHHCCCEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCC PAARAEAVGFVNAVFDDHDTLLAAVSEIAREIASKSPLAVWGTKHSLHHARDHAVDDGLD CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCH LVALWQAGMYHPDDCLESLCAQKDQRTPVFEDLRPAP HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCC >Mature Secondary Structure SLTCFDVRYEDGVAHLRLNRPDQKNSLIPSFWAELRTLVTDIDREARARVIVISSTGRH CEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHCEEEEEEECCCCH FCAGLDLGVFVGGMFRAGGGGDEPGRKRAVLYQGIRVLQETFTALERARLPVIAAIQGGC HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC VGAGLGMVSACDLRYATRDAFFLVQETNLGITAEVGQLQRLPKVMPEGIVREMAYRGMRL HHHCCCHHHHHHHHHHCCCEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCC PAARAEAVGFVNAVFDDHDTLLAAVSEIAREIASKSPLAVWGTKHSLHHARDHAVDDGLD CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCH LVALWQAGMYHPDDCLESLCAQKDQRTPVFEDLRPAP HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA