| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314500
Identifier: 158314500
GI number: 158314500
Start: 3165454
End: 3166083
Strand: Direct
Name: 158314500
Synonym: Franean1_2673
Alternate gene names: NA
Gene position: 3165454-3166083 (Clockwise)
Preceding gene: 158314493
Following gene: 158314502
Centisome position: 35.24
GC content: 69.05
Gene sequence:
>630_bases ATGCTCGCGATCCTGGCCGGCAAGCTGGATCCCGCCGCTGGGACAGCGTCAGCTCGCTCCGAGGACGCGCTGACCGACGC GGTGTTCGGCGCGATCCGCCACCTGCCCTACCGGCGGGTGCTCGGGACGGTGCTCGCCGCCGTCGACGTGCCGGTCGATC CGGAGACGTTGGACCGTGCGCAAGTCTTGCTGTGGCCGAGTTACCAAGTGCCTCAGCTACCGGGGATGCGGGTCGAGCCG GACGTGGTGGTGACCGCCGGGACGACGGTGGTCGTGTTCGAGGCGAAGTACACCTCCCCTTTTTCGCTCTACCCCGCAGA CGAGCCGGCCGGCGGTGAGCCGCTGCACCAGCTCGCTGCCCAGTTCGCCGCGCTGCGCGCGGTCGCCGCGGCTCGCGGTT GGCCGGGCCCCGGATGGATTCCGGGCAGCGGGAACGTCGCGGGATGGTTCCTGTGTTCACTGAGAATCGATCGACCAGTT CGGCACCCAGCTTTGCCCCGGCAGCATCGCCACGACTACGCCGCAGACCTTCATCGTGGCCTCCCCACCGACACGCCAAG TCGGCTACGGAGTCGAGCCACTCACCAAGCGACCCGTGCACTGCACCCCGGCCTGTATCCACCAGGTTGA
Upstream 100 bases:
>100_bases GCCCTCCGCCTCGAGCCGGCCAGAGATCCCGACGCCCGTCGATGCCTTGACCACCGGCCCTTGTCTACGGGGCCAAGATC GAGTTGGTCATACTGGGTCG
Downstream 100 bases:
>100_bases AGCCGGTGCCACGCTTACGGAGCTTTACCACTCTGGTTCCTCTCGTATACCCTCTGGTCTCGCTCGCCGGACCCGACCCG TCTGGCAGGTCCAGCAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MLAILAGKLDPAAGTASARSEDALTDAVFGAIRHLPYRRVLGTVLAAVDVPVDPETLDRAQVLLWPSYQVPQLPGMRVEP DVVVTAGTTVVVFEAKYTSPFSLYPADEPAGGEPLHQLAAQFAALRAVAAARGWPGPGWIPGSGNVAGWFLCSLRIDRPV RHPALPRQHRHDYAADLHRGLPTDTPSRLRSRATHQATRALHPGLYPPG
Sequences:
>Translated_209_residues MLAILAGKLDPAAGTASARSEDALTDAVFGAIRHLPYRRVLGTVLAAVDVPVDPETLDRAQVLLWPSYQVPQLPGMRVEP DVVVTAGTTVVVFEAKYTSPFSLYPADEPAGGEPLHQLAAQFAALRAVAAARGWPGPGWIPGSGNVAGWFLCSLRIDRPV RHPALPRQHRHDYAADLHRGLPTDTPSRLRSRATHQATRALHPGLYPPG >Mature_209_residues MLAILAGKLDPAAGTASARSEDALTDAVFGAIRHLPYRRVLGTVLAAVDVPVDPETLDRAQVLLWPSYQVPQLPGMRVEP DVVVTAGTTVVVFEAKYTSPFSLYPADEPAGGEPLHQLAAQFAALRAVAAARGWPGPGWIPGSGNVAGWFLCSLRIDRPV RHPALPRQHRHDYAADLHRGLPTDTPSRLRSRATHQATRALHPGLYPPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22419; Mature: 22419
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAILAGKLDPAAGTASARSEDALTDAVFGAIRHLPYRRVLGTVLAAVDVPVDPETLDRA CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCE QVLLWPSYQVPQLPGMRVEPDVVVTAGTTVVVFEAKYTSPFSLYPADEPAGGEPLHQLAA EEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHH QFAALRAVAAARGWPGPGWIPGSGNVAGWFLCSLRIDRPVRHPALPRQHRHDYAADLHRG HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC LPTDTPSRLRSRATHQATRALHPGLYPPG CCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLAILAGKLDPAAGTASARSEDALTDAVFGAIRHLPYRRVLGTVLAAVDVPVDPETLDRA CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCE QVLLWPSYQVPQLPGMRVEPDVVVTAGTTVVVFEAKYTSPFSLYPADEPAGGEPLHQLAA EEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHH QFAALRAVAAARGWPGPGWIPGSGNVAGWFLCSLRIDRPVRHPALPRQHRHDYAADLHRG HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC LPTDTPSRLRSRATHQATRALHPGLYPPG CCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA