Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314479

Identifier: 158314479

GI number: 158314479

Start: 3137656

End: 3138162

Strand: Direct

Name: 158314479

Synonym: Franean1_2652

Alternate gene names: NA

Gene position: 3137656-3138162 (Clockwise)

Preceding gene: 158314477

Following gene: 158314480

Centisome position: 34.93

GC content: 70.41

Gene sequence:

>507_bases
GTGCGGGACCGAGATCGCCGCAACCCGCTCCTCGCGTACGCCGTGAGTGCGGCGGGCAGCGGCGTCGGGTCCGGGGCACT
GCCGATCGTCGCCGTTCTCGTCCTGCACGCCTCTGCGTTCGAGGTGTCGATGCTCTCCGGCCTGGCCGGACTCACCGCGG
CGGCGGTTCTGCTGCCGCTGGGCGCCGGTATCGAACATCGACGCAAACGACCCGTGATGATCGCGGCGGATCTGGTGCGA
TGCGCCGCGCTCGCCAGCGTGCCCGCTGCTGCCGCGCTGCATCTCCTTACCTATCCGCAGCTGGTCGCGGTTGGGGCGAT
CTCCACGATCGCGTCGATCGCGTTTGCCGCCGCCAGCGGGGCGCATCTGAAAGCGATGACGGACCCGGCGGGACGTCTGG
CGGCGAACAGCTGGTTCGAGACCGCCGACTGGACGGCGAGTACGGCGGGTCAGTCCTCGGCGAGCTCCCGCGACGAGGGC
CGTGGCACCGTCGGTCGAACGCTATAA

Upstream 100 bases:

>100_bases
GCGATCATCTGGGCGGGCCGCGTGAGCCGCATCGAATTCTGCGTGTTGCACTGCACGGCGGTTCAGGCTGCCGGGGGATC
ATGGGTGGTACCGTGCGCCG

Downstream 100 bases:

>100_bases
TGATCTTCAATGACCTCAGTGATCGATATCCTTTGGGGCTCGGAGCCGGTAGAAGCCTCCGAGCAGCACTTCCTCGGTCG
GCTCCAGGCTGATCTGCAGG

Product: transmembrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRDRDRRNPLLAYAVSAAGSGVGSGALPIVAVLVLHASAFEVSMLSGLAGLTAAAVLLPLGAGIEHRRKRPVMIAADLVR
CAALASVPAAAALHLLTYPQLVAVGAISTIASIAFAAASGAHLKAMTDPAGRLAANSWFETADWTASTAGQSSASSRDEG
RGTVGRTL

Sequences:

>Translated_168_residues
MRDRDRRNPLLAYAVSAAGSGVGSGALPIVAVLVLHASAFEVSMLSGLAGLTAAAVLLPLGAGIEHRRKRPVMIAADLVR
CAALASVPAAAALHLLTYPQLVAVGAISTIASIAFAAASGAHLKAMTDPAGRLAANSWFETADWTASTAGQSSASSRDEG
RGTVGRTL
>Mature_168_residues
MRDRDRRNPLLAYAVSAAGSGVGSGALPIVAVLVLHASAFEVSMLSGLAGLTAAAVLLPLGAGIEHRRKRPVMIAADLVR
CAALASVPAAAALHLLTYPQLVAVGAISTIASIAFAAASGAHLKAMTDPAGRLAANSWFETADWTASTAGQSSASSRDEG
RGTVGRTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16928; Mature: 16928

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDRDRRNPLLAYAVSAAGSGVGSGALPIVAVLVLHASAFEVSMLSGLAGLTAAAVLLPL
CCCCCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGIEHRRKRPVMIAADLVRCAALASVPAAAALHLLTYPQLVAVGAISTIASIAFAAASG
CCCHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AHLKAMTDPAGRLAANSWFETADWTASTAGQSSASSRDEGRGTVGRTL
CEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRDRDRRNPLLAYAVSAAGSGVGSGALPIVAVLVLHASAFEVSMLSGLAGLTAAAVLLPL
CCCCCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGIEHRRKRPVMIAADLVRCAALASVPAAAALHLLTYPQLVAVGAISTIASIAFAAASG
CCCHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AHLKAMTDPAGRLAANSWFETADWTASTAGQSSASSRDEGRGTVGRTL
CEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA