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The map label for this gene is iap [H]

Identifier: 158314383

GI number: 158314383

Start: 3040581

End: 3041180

Strand: Direct

Name: iap [H]

Synonym: Franean1_2555

Alternate gene names: 158314383

Gene position: 3040581-3041180 (Clockwise)

Preceding gene: 158314382

Following gene: 158314385

Centisome position: 33.85

GC content: 64.33

Gene sequence:

>600_bases
GTGAAAACCCCACACCGAATCGGGGACCGGCTACAGCTACATCGCGCTGAATCCGCGGGCGAGCGCCGGCCGGACCTCCG
ACTGAAAGATCAACCGGACGATCGACACACAACTAGACGCACTCCAAGATTTCAGTGTCCAGCTCACGGCGCCGACCGAC
TGAAGTCTTCGGGTGCGGTTGACAAGTACGGCTCGACTGGCGGTTTCGGGGCCGACACCGCCCCCTCCGACGCCGGCTAC
GCCGCCGTCCTCTACGCCCAGGGCCAGATCGGCATCCCCTACCTATGGGGTGGCGACGGCCCGGCCGAAGGCGGTTTTGA
CTGTTCTGGCCTCACCCGGGCCGCCTACCTGGCCGCCGGCATCGACCTGCCCCGTACCGCACAGACCCAGTACGAAGCCG
GGCCCGTGGTCCCGCCCGGGGAACCACTCCAGATCGGCGACCTCGTCTACTACGGCACCGCCACCAACATCCACCATGTC
GCGATCTACATCGGAAACGGGCAGATGATCACAGCTCCAGGTCGTAAGAAAGTGGTGCAAATCGCGCCATATAGGTGGAA
TGGGGATGACTATTTCGGGGCGACCAGGCCGGTCACGTAG

Upstream 100 bases:

>100_bases
ACCGCCTACCTGTGGCGGGGCTCCGACGACACGACTCCCACCTTCACTTCACCCACATAGACAACTGGCGTCATCGCCTG
ATCGGAGCCCCGCGCGACGA

Downstream 100 bases:

>100_bases
GGCGCTGTAGGTTCTCAAAGGAAATGTCAGTTTCTCAAATTGGATGTCGCTGATCCGTCACCGACCGACAGATCGGTGAG
AAGTGGCTCGGCGTGGCGCC

Product: NLP/P60 protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKTPHRIGDRLQLHRAESAGERRPDLRLKDQPDDRHTTRRTPRFQCPAHGADRLKSSGAVDKYGSTGGFGADTAPSDAGY
AAVLYAQGQIGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQTQYEAGPVVPPGEPLQIGDLVYYGTATNIHHV
AIYIGNGQMITAPGRKKVVQIAPYRWNGDDYFGATRPVT

Sequences:

>Translated_199_residues
MKTPHRIGDRLQLHRAESAGERRPDLRLKDQPDDRHTTRRTPRFQCPAHGADRLKSSGAVDKYGSTGGFGADTAPSDAGY
AAVLYAQGQIGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQTQYEAGPVVPPGEPLQIGDLVYYGTATNIHHV
AIYIGNGQMITAPGRKKVVQIAPYRWNGDDYFGATRPVT
>Mature_199_residues
MKTPHRIGDRLQLHRAESAGERRPDLRLKDQPDDRHTTRRTPRFQCPAHGADRLKSSGAVDKYGSTGGFGADTAPSDAGY
AAVLYAQGQIGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQTQYEAGPVVPPGEPLQIGDLVYYGTATNIHHV
AIYIGNGQMITAPGRKKVVQIAPYRWNGDDYFGATRPVT

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=121, Percent_Identity=40.495867768595, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786421, Length=181, Percent_Identity=30.3867403314917, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 21378; Mature: 21378

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPHRIGDRLQLHRAESAGERRPDLRLKDQPDDRHTTRRTPRFQCPAHGADRLKSSGAV
CCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCC
DKYGSTGGFGADTAPSDAGYAAVLYAQGQIGIPYLWGGDGPAEGGFDCSGLTRAAYLAAG
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHC
IDLPRTAQTQYEAGPVVPPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGRKKVVQ
CCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCEEEEEEEECCCEEEECCCCCCEEE
IAPYRWNGDDYFGATRPVT
ECCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKTPHRIGDRLQLHRAESAGERRPDLRLKDQPDDRHTTRRTPRFQCPAHGADRLKSSGAV
CCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCC
DKYGSTGGFGADTAPSDAGYAAVLYAQGQIGIPYLWGGDGPAEGGFDCSGLTRAAYLAAG
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHC
IDLPRTAQTQYEAGPVVPPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGRKKVVQ
CCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCEEEEEEEECCCEEEECCCCCCEEE
IAPYRWNGDDYFGATRPVT
ECCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]