| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314381
Identifier: 158314381
GI number: 158314381
Start: 3039184
End: 3039603
Strand: Direct
Name: 158314381
Synonym: Franean1_2553
Alternate gene names: NA
Gene position: 3039184-3039603 (Clockwise)
Preceding gene: 158314380
Following gene: 158314382
Centisome position: 33.84
GC content: 68.57
Gene sequence:
>420_bases ATGAGAACCTATGACGACGGGGTGCTGGAAGCCGCGCGAACGATCCGGCCCTACCTGACAGACCTGGTCGGACCGGATGC CGCCGGACCTCTGGACCTGCAGATCGCCGACCACCTCAACAGCTCCGCCGGCCGGGTGCAGACCAGCAGCCAGCTTCAGA TGGTGCTTGACGAACATGAGGACACCCGCTGGTTCCTCGCCGAGACGCTGGCCGACGCACCCCACTACAGGCCGCCCTAC CTTCAGCCGCCCTACGTGCCGCGTGGCGCCGGCGGCATGGCCTCTCCAGCCGGTGACGCCGGACTGATCGGCGCGAACCG CTACACCTGCCCGCGCGGCGACTACATCTGGTACCGGCCAGAAATCGGCACCCCGGTTCCGGACTGCCCGACCCACCAGG TCCCACTGGCCCGGAGCTGA
Upstream 100 bases:
>100_bases ACACATGCCGTCGGTGTGGGCGTCGCACATCCACAGCGGCGCCTGACGTGAACCCGGAAAGCTCGGTCGTGAGATCAGTA CGACGTGCACAGGGGGACTG
Downstream 100 bases:
>100_bases CGGCCCCGTGCTCACCGCATTCTGGGAGGCCACCGGGAACAAACTCGCCGACCGATGGGCTACCGCCTCCGTCCCCGCGC TCGTCTTCTGGCTAGCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRTYDDGVLEAARTIRPYLTDLVGPDAAGPLDLQIADHLNSSAGRVQTSSQLQMVLDEHEDTRWFLAETLADAPHYRPPY LQPPYVPRGAGGMASPAGDAGLIGANRYTCPRGDYIWYRPEIGTPVPDCPTHQVPLARS
Sequences:
>Translated_139_residues MRTYDDGVLEAARTIRPYLTDLVGPDAAGPLDLQIADHLNSSAGRVQTSSQLQMVLDEHEDTRWFLAETLADAPHYRPPY LQPPYVPRGAGGMASPAGDAGLIGANRYTCPRGDYIWYRPEIGTPVPDCPTHQVPLARS >Mature_139_residues MRTYDDGVLEAARTIRPYLTDLVGPDAAGPLDLQIADHLNSSAGRVQTSSQLQMVLDEHEDTRWFLAETLADAPHYRPPY LQPPYVPRGAGGMASPAGDAGLIGANRYTCPRGDYIWYRPEIGTPVPDCPTHQVPLARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15201; Mature: 15201
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTYDDGVLEAARTIRPYLTDLVGPDAAGPLDLQIADHLNSSAGRVQTSSQLQMVLDEHE CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCEECHHHHHHHHHCCC DTRWFLAETLADAPHYRPPYLQPPYVPRGAGGMASPAGDAGLIGANRYTCPRGDYIWYRP CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEECC EIGTPVPDCPTHQVPLARS CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTYDDGVLEAARTIRPYLTDLVGPDAAGPLDLQIADHLNSSAGRVQTSSQLQMVLDEHE CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCEECHHHHHHHHHCCC DTRWFLAETLADAPHYRPPYLQPPYVPRGAGGMASPAGDAGLIGANRYTCPRGDYIWYRP CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEECC EIGTPVPDCPTHQVPLARS CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA