| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ssuD [H]
Identifier: 158314345
GI number: 158314345
Start: 2994340
End: 2995419
Strand: Direct
Name: ssuD [H]
Synonym: Franean1_2515
Alternate gene names: 158314345
Gene position: 2994340-2995419 (Clockwise)
Preceding gene: 158314344
Following gene: 158314349
Centisome position: 33.34
GC content: 71.76
Gene sequence:
>1080_bases GTGAGCATCGAGTTCATCGGTATCGCCAGCACCTTCGCCGGCAGTGAGTCGGAGGCGTGGTCCGGCCCCGCCGTCGACCC GGACTACCTGGAGCGCCTGGTGCGCACGCACGAGGACGCCGGGTTCGACCGGGTGCTCGTCGCGCACAGCTCCGCCATGC CCGACGGCTTCGTCATCACCGACCAGATCCTGTCCCGGACGACGACGTTGAAGGTGCTGCTGGCGCACCGGCCCGGCTTC ACCGCCCCGACGATCGCGGCCCGCCAGTTCGCGACGCTGGACGCCTTCCACCCGGGCCGGGTGGCGCTGCACGTCATCAC CGGCGGCGACGACGCCGACCAGGCCCGCGACGGGGACCTCACCGACAAGGTGACCCGCTACCGGCGCACCGACGAGTTCC TGGACGTGCTGCGTTGCGAGTGGGAGTCGGCCGAGCCGTTCGACTACGACGGTGACTTCTACACGGTTCGCGGTGCCCGC TCGTCGGTCCTCCCCGACGGCCGCATCCCCATCTACTTCGGCGGCGCGTCCGCGGATGCCGTCCGGGTCGGTGGCAAGCA CGCCGACGTGTACGCCTTCTGGGGAGAGCCAATCGCCGGAATCGTCGAGCGGATCCGCGAGGTGCGGGCCGCCGCCGAGC CGTACGGCCGCAGCCCCCGGTTCAGCGTCAGCCTGCGCCCCATCCCCGCGGACACCGAGCAGGCCGCCTGGCAGCGCGCC GCGGACATCCTGGAGCTCACCAGGCAGCGGGTCGGCGACCTGAAGAAGGTGTTCAACTTCGACGGGGCGGCCCAGGTCGG CAGCCAGCGGCTGCTGCGCTACGCAGACCAGGCGGACGTGCACGACAAGCGGCTGTGGACGGCGGTCGCCAAGGCCACCG GCGCCGCCGGCAACTCCACCGCGCTGGTCGGCAGCTACGAGCAGGTCGCCGAGTCGCTCGTCGACTATGTCAACGTCGGG GTGTCCACGCTGCTCATCCGCGGCTTCGCGCCGTTGGAGGACGCCCGGGACTACGGCACCCTGATCCGCCTTGTCCGCGA GCAGACCGCCGACCGCGAGGCCGTCGGCGCCTCCGCCTGA
Upstream 100 bases:
>100_bases CCGGCCGGCCGGCCGGCGAATGGGCCGCCGCGTGCCACCACGTCGAGACCTGGCGGGACCAGGTCACCGGCTCCACCGCC ATCCTGAAGGAGTCCTCAGC
Downstream 100 bases:
>100_bases CGACGGGCCCGGCCCGCGTTGTGACCGGCCTGCGGCCGACGACCTCCGTGCCGACCTCCCGGTTGTCCCAGGGCTGCGTC GGCCAGCACGCCCTCGTCGA
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSIEFIGIASTFAGSESEAWSGPAVDPDYLERLVRTHEDAGFDRVLVAHSSAMPDGFVITDQILSRTTTLKVLLAHRPGF TAPTIAARQFATLDAFHPGRVALHVITGGDDADQARDGDLTDKVTRYRRTDEFLDVLRCEWESAEPFDYDGDFYTVRGAR SSVLPDGRIPIYFGGASADAVRVGGKHADVYAFWGEPIAGIVERIREVRAAAEPYGRSPRFSVSLRPIPADTEQAAWQRA ADILELTRQRVGDLKKVFNFDGAAQVGSQRLLRYADQADVHDKRLWTAVAKATGAAGNSTALVGSYEQVAESLVDYVNVG VSTLLIRGFAPLEDARDYGTLIRLVREQTADREAVGASA
Sequences:
>Translated_359_residues MSIEFIGIASTFAGSESEAWSGPAVDPDYLERLVRTHEDAGFDRVLVAHSSAMPDGFVITDQILSRTTTLKVLLAHRPGF TAPTIAARQFATLDAFHPGRVALHVITGGDDADQARDGDLTDKVTRYRRTDEFLDVLRCEWESAEPFDYDGDFYTVRGAR SSVLPDGRIPIYFGGASADAVRVGGKHADVYAFWGEPIAGIVERIREVRAAAEPYGRSPRFSVSLRPIPADTEQAAWQRA ADILELTRQRVGDLKKVFNFDGAAQVGSQRLLRYADQADVHDKRLWTAVAKATGAAGNSTALVGSYEQVAESLVDYVNVG VSTLLIRGFAPLEDARDYGTLIRLVREQTADREAVGASA >Mature_358_residues SIEFIGIASTFAGSESEAWSGPAVDPDYLERLVRTHEDAGFDRVLVAHSSAMPDGFVITDQILSRTTTLKVLLAHRPGFT APTIAARQFATLDAFHPGRVALHVITGGDDADQARDGDLTDKVTRYRRTDEFLDVLRCEWESAEPFDYDGDFYTVRGARS SVLPDGRIPIYFGGASADAVRVGGKHADVYAFWGEPIAGIVERIREVRAAAEPYGRSPRFSVSLRPIPADTEQAAWQRAA DILELTRQRVGDLKKVFNFDGAAQVGSQRLLRYADQADVHDKRLWTAVAKATGAAGNSTALVGSYEQVAESLVDYVNVGV STLLIRGFAPLEDARDYGTLIRLVREQTADREAVGASA
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=324, Percent_Identity=32.7160493827161, Blast_Score=155, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 39136; Mature: 39005
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEFIGIASTFAGSESEAWSGPAVDPDYLERLVRTHEDAGFDRVLVAHSSAMPDGFVIT CCEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEH DQILSRTTTLKVLLAHRPGFTAPTIAARQFATLDAFHPGRVALHVITGGDDADQARDGDL HHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCH TDKVTRYRRTDEFLDVLRCEWESAEPFDYDGDFYTVRGARSSVLPDGRIPIYFGGASADA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCE VRVGGKHADVYAFWGEPIAGIVERIREVRAAAEPYGRSPRFSVSLRPIPADTEQAAWQRA EEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH ADILELTRQRVGDLKKVFNFDGAAQVGSQRLLRYADQADVHDKRLWTAVAKATGAAGNST HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC ALVGSYEQVAESLVDYVNVGVSTLLIRGFAPLEDARDYGTLIRLVREQTADREAVGASA EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure SIEFIGIASTFAGSESEAWSGPAVDPDYLERLVRTHEDAGFDRVLVAHSSAMPDGFVIT CEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEH DQILSRTTTLKVLLAHRPGFTAPTIAARQFATLDAFHPGRVALHVITGGDDADQARDGDL HHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCH TDKVTRYRRTDEFLDVLRCEWESAEPFDYDGDFYTVRGARSSVLPDGRIPIYFGGASADA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCE VRVGGKHADVYAFWGEPIAGIVERIREVRAAAEPYGRSPRFSVSLRPIPADTEQAAWQRA EEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH ADILELTRQRVGDLKKVFNFDGAAQVGSQRLLRYADQADVHDKRLWTAVAKATGAAGNST HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC ALVGSYEQVAESLVDYVNVGVSTLLIRGFAPLEDARDYGTLIRLVREQTADREAVGASA EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA