| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is glnH [H]
Identifier: 158314289
GI number: 158314289
Start: 2926945
End: 2928102
Strand: Direct
Name: glnH [H]
Synonym: Franean1_2459
Alternate gene names: 158314289
Gene position: 2926945-2928102 (Clockwise)
Preceding gene: 158314288
Following gene: 158314296
Centisome position: 32.59
GC content: 75.39
Gene sequence:
>1158_bases GTGAACAGACGCGCCCGTGTCGTCGCCGTTCTCGTCGCGCTCGGGATCGGGCTGGGGCTGGCCGCGCTGCCGGGGTGCGC GACGACGGGCAGTCCGCTGCCCCGCCAGGCTCGGCCGCTGCCGCCCGCCGACGGCGTCGCCGCCCCGGCCCGTCCCGAGG CGGCCGCCGGCTCGGCGGGGCCCCCGTCAACACCAGGCCAGCCGGGTCCGTCCGCGCAGCCCTGTATCGCCCGCGCGAGT GTGCCCCCGCTCGCCGCCCTGCCGCCGCCGGGAGCGCGCGGATCGCGGATCGAGGCGATCCGGCGGTACGGCTACCTTCG CGTCGGGGTGACCACGGTGGCCCCGCCGTTCGGGTCGATGAACTGGCGCACCATGGAGGTGGAGGGCTTCGACCCGGCCA TCGCCGGCGAGATCGCCGGGGCCATTCTCGGCGACCCCGAACTGGTGCAGTTCCGCGCGGTCGACACCCGGGACAGGGAG GCGCTGGTCGCCGACGGCACCGTCGACATCGTCACCGGCACGATGACGATGACCTGCGCCCGCAAGGAGCGGGTCCGCTT CTCCGGGGTGTACTACGAGGCCGCGATGCGCATCCTGGTGCCGGCCGGCGCGGGCCTGCGCACCGTCGGTGACCTCGCTG GACGGCCGGTCTGCTCGTCGCAGGGAAGCACCTCGTTCGAGAAGGTCGCGAACCTGGTGCGCGGCCCCGGCCGGCCGGTC GCGGTGAACCGGGTGGGGATCGTGGACTGCCTGGCCGCGCTCCAGCGCGGCGAGGTGGACGCGGTGGCCACCGACGACAC GATCCTCGCCGGGATGCGCGCCGAGGACGCCACCGTCACCGTCCTCGGTCCCGAGGCGTTCGACGGCGTTCTGGGCCCGG CGGGCCGCGCCGGCCTCGACGAGCCCTACGGTGTGGCGATCGGCCGGACGGATCTCGCGCCGGGCCTCTCCCCGGCCGAG GCCGCGGCGAACCGGGCCGCCGACGACGCCTTCGTCGCCTTCGTCAACCGGGTGCTGCTCGACATGATGACCGGCCCGAC CTGGAACAGGCTCTACACCCGCTACCTGCGCGACGTCCTGCGGGTCCCGGGCGTGCCCCCGAACGCCATCCAGCCGAACT GGCCGGACGGCGTGCTCGTCACGGGCGGCGGATCGTGA
Upstream 100 bases:
>100_bases CCGCCGACGTGCGCCTCCTCGCCGCCGTCCTCCCGATCGCCCTGCTCACCGCGGCGTCCTGCTGCGTGATCGGGATCAGT GCCCGCGTCCGGGAGTACCT
Downstream 100 bases:
>100_bases TCCGGGTCCAGGCGCCGACGAACACCCGGTCCCCGTCACGCAGCGAGACGGGGTGCCCGGCCGGGATCGGCTGACTGCTG TCGTTCACCCTGGTCCCGTT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MNRRARVVAVLVALGIGLGLAALPGCATTGSPLPRQARPLPPADGVAAPARPEAAAGSAGPPSTPGQPGPSAQPCIARAS VPPLAALPPPGARGSRIEAIRRYGYLRVGVTTVAPPFGSMNWRTMEVEGFDPAIAGEIAGAILGDPELVQFRAVDTRDRE ALVADGTVDIVTGTMTMTCARKERVRFSGVYYEAAMRILVPAGAGLRTVGDLAGRPVCSSQGSTSFEKVANLVRGPGRPV AVNRVGIVDCLAALQRGEVDAVATDDTILAGMRAEDATVTVLGPEAFDGVLGPAGRAGLDEPYGVAIGRTDLAPGLSPAE AAANRAADDAFVAFVNRVLLDMMTGPTWNRLYTRYLRDVLRVPGVPPNAIQPNWPDGVLVTGGGS
Sequences:
>Translated_385_residues MNRRARVVAVLVALGIGLGLAALPGCATTGSPLPRQARPLPPADGVAAPARPEAAAGSAGPPSTPGQPGPSAQPCIARAS VPPLAALPPPGARGSRIEAIRRYGYLRVGVTTVAPPFGSMNWRTMEVEGFDPAIAGEIAGAILGDPELVQFRAVDTRDRE ALVADGTVDIVTGTMTMTCARKERVRFSGVYYEAAMRILVPAGAGLRTVGDLAGRPVCSSQGSTSFEKVANLVRGPGRPV AVNRVGIVDCLAALQRGEVDAVATDDTILAGMRAEDATVTVLGPEAFDGVLGPAGRAGLDEPYGVAIGRTDLAPGLSPAE AAANRAADDAFVAFVNRVLLDMMTGPTWNRLYTRYLRDVLRVPGVPPNAIQPNWPDGVLVTGGGS >Mature_385_residues MNRRARVVAVLVALGIGLGLAALPGCATTGSPLPRQARPLPPADGVAAPARPEAAAGSAGPPSTPGQPGPSAQPCIARAS VPPLAALPPPGARGSRIEAIRRYGYLRVGVTTVAPPFGSMNWRTMEVEGFDPAIAGEIAGAILGDPELVQFRAVDTRDRE ALVADGTVDIVTGTMTMTCARKERVRFSGVYYEAAMRILVPAGAGLRTVGDLAGRPVCSSQGSTSFEKVANLVRGPGRPV AVNRVGIVDCLAALQRGEVDAVATDDTILAGMRAEDATVTVLGPEAFDGVLGPAGRAGLDEPYGVAIGRTDLAPGLSPAE AAANRAADDAFVAFVNRVLLDMMTGPTWNRLYTRYLRDVLRVPGVPPNAIQPNWPDGVLVTGGGS
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 39591; Mature: 39591
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRARVVAVLVALGIGLGLAALPGCATTGSPLPRQARPLPPADGVAAPARPEAAAGSAG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPSTPGQPGPSAQPCIARASVPPLAALPPPGARGSRIEAIRRYGYLRVGVTTVAPPFGSM CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEHEEECCCCCCC NWRTMEVEGFDPAIAGEIAGAILGDPELVQFRAVDTRDREALVADGTVDIVTGTMTMTCA CEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCEEEEEECCEEEEEH RKERVRFSGVYYEAAMRILVPAGAGLRTVGDLAGRPVCSSQGSTSFEKVANLVRGPGRPV HHHHHHHHHEEHHHEEEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCE AVNRVGIVDCLAALQRGEVDAVATDDTILAGMRAEDATVTVLGPEAFDGVLGPAGRAGLD EECCHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCC EPYGVAIGRTDLAPGLSPAEAAANRAADDAFVAFVNRVLLDMMTGPTWNRLYTRYLRDVL CCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RVPGVPPNAIQPNWPDGVLVTGGGS HCCCCCCCCCCCCCCCCEEEECCCC >Mature Secondary Structure MNRRARVVAVLVALGIGLGLAALPGCATTGSPLPRQARPLPPADGVAAPARPEAAAGSAG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPSTPGQPGPSAQPCIARASVPPLAALPPPGARGSRIEAIRRYGYLRVGVTTVAPPFGSM CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEHEEECCCCCCC NWRTMEVEGFDPAIAGEIAGAILGDPELVQFRAVDTRDREALVADGTVDIVTGTMTMTCA CEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCEEEEEECCEEEEEH RKERVRFSGVYYEAAMRILVPAGAGLRTVGDLAGRPVCSSQGSTSFEKVANLVRGPGRPV HHHHHHHHHEEHHHEEEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCE AVNRVGIVDCLAALQRGEVDAVATDDTILAGMRAEDATVTVLGPEAFDGVLGPAGRAGLD EECCHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCC EPYGVAIGRTDLAPGLSPAEAAANRAADDAFVAFVNRVLLDMMTGPTWNRLYTRYLRDVL CCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RVPGVPPNAIQPNWPDGVLVTGGGS HCCCCCCCCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]