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The map label for this gene is helD [H]

Identifier: 158314277

GI number: 158314277

Start: 2906394

End: 2908772

Strand: Direct

Name: helD [H]

Synonym: Franean1_2447

Alternate gene names: 158314277

Gene position: 2906394-2908772 (Clockwise)

Preceding gene: 158314276

Following gene: 158314282

Centisome position: 32.36

GC content: 76.12

Gene sequence:

>2379_bases
ATGGGTGACGGCGCGGCCGAGGGGCGCGATGAGGATCCCCGGTCTGTGGATGTCCGGCCGGCAGATCTCCGGCCAGCGGA
CGCCCGGTCGGTGGATCCGTGGTCGGCGGAGCTCGCCGCCGAGCGCCGTCACCTGGACCGCGCCCGCGCGGCGCTGGTTC
GGATGCGGCACGAGGCCGAGGCGACGGAGATCGCCGAAGGCGACCCCGTCGCTGACAAGGTGACGAACGCGTCCCTGAAA
GCGGCGCGGCGGCGGCGCCTCGAGGCGCTGAGCGACCCCGCGAGCGGGGCACCGTTGTTCTTCGGACGGATCGACTACGC
CGCGGGCGCCGCCGCCGCGCCGGGTCGGCGCGTCCACCTGGGACGGCGCCATGTGCGGGAGGCCGCCGGCGATGATCCGC
TGGTCGTCGACTGGCGCACCGACATCGCCCGTCCGTACTACCGCGCCCATAGGGGCGACGCGATGGGGCTCGTGGCGCGG
CGCCGGTTCGGGTTCGACGGCCCCGAGCTCACCGCGTTCGAGGAGGAACCACTCGTCGAACCGTCGCCCGGCCCGGCAGG
CGCGTCACGAGCCGGCGGGCCGGCCGGAGGCGACCTGCTCGCCCGCGAGATCGCGCGGCCCCGCTCGGGGCCCATGCGTG
ACATCGTCGCGACGATCCAGCCCGAGCAGGACGAGATCGTCCGGGCCGATCTCGAGGTGAGCGTCTGCGTCCAGGGCGCG
CCGGGCACCGGCAAGACGGCGGTCGGCCTGCACCGGGCTGCCTACCTGCTGTTCGCCTACCGGGAGCGGCTCAGTCGCGC
CGGGGTGCTCGTCGTCGGGCCGAACCGGGCCTTCCTGCGTTACATCGGCGCGGTCCTGCCCGCGCTTGGCGAGTTCACCG
TCACCCACCGTAGTCTCAGCGCCCTCGTGGACATCGCGACGGCGCGCGGAACCGACCCGGAGCCAGTGGCCGAGATCAAG
AGCGACGCCCGGATGGCCGTGGTGATCCGCCGGGCGCTCGGCGCCACCCGGCCCGGCGCCTCCCCGCCGGCTGCCCTGAT
CACGAGCTCGCTCGGTCGGTGGACGGTGAGCGGCGACGAGATCGCCGGCTTGGCCGCCGGCATCCAGGCTGGCGGCCACC
GCCATCGCGTGGCTCGGGACCTGCTCGCCCGGCGGATCGCCGCCGCGGTGGTCCGCCGCGCCGAGGAGCGGGGGCACCTG
CCGGCCGACTCCGCGGTGGAGCGCCTCGCCCGCACCCGGTCCGTCAGGGCGGCGGTCGACGCCGTCTGGCCGCGCACCGA
CGCGGCCGGGCTGATCCACCGGCTGTTCACCGACCCCGCCCTGCTCGCCCACGCCGCCGACGGCGTGCTCTCCGCGCCCG
AGCAGCGCCTGCTGCTGGCCGACCGGCCGACGTCGCGGCGGGCCGTCCGCTGGTCGCCCGCCGACCTGTTCTGCCTGGAC
GAGGCACTGGACCTGATCGACGGCGTGCCGGCGTTCGGGCACGTCATCGTGGACGAGGCCCAGGACCTCTCGGCCATGCA
GTGCCGGGCCGTCGGACGCCGCTGCGCCACCGGCTCGCTCACCGTCCTCGGGGATCTGGCCCAGGGCACCACCGCCTGGG
CCGCGCGCTCCTGGGAGCAGGCGCTTGCCCACTTCGGTAAGCCCGCCGCGCGGCTGGAGGTGCTGACCCGAGGCCACCGG
GTACCGGCCGAGATCCTCTCGTTCGCCGACCGTCTGCTCCCGAGCATCGCGCCGGATCTGCCTCCCGCGTCGTCGACCCG
CGCCGTCCCGGGTGCGCTGCGGGTGATCGCCGCCCCGCCGGACGACCTGGCCGGCGAGGCTGCACACCAGGTTCGTGCCG
GGCTGGGCCGCGGCGGCTCGGTGGCGGTGATCGCCCCCGACGAGGCCGTCGGCGGCCTGACGGCGTCGCTGCGCGCGGCG
GGCCTGCCCGCCACCGCCCTCACCGACGACGCCGCCCTCACCGACGACGCCGCCCTCACCGACGCCGCCCTGACGGAGGG
CGCTTCGCTCACCGACAAGCCCGTGCCGGAAGGGCGGGCGTCCCGGCCGGTGACTGTCGTGCCCGCGTCGCTCGCGAAGG
GACTCGAGTTCGACCATGTGGTCCTCGTCGACCCGGCGTCCGTCGCCGGCTCCGGGCCGGGCTCCGTCCAGGGGCTGCGC
CGGCTCTACGTGGTGCTGACCCGGGCGGTGACCTCCCTGGCAGTGATCCACGCGGGTGAGCTCCCGAGCGCTCTCGCGGA
TCCGGGCGGCCCGTTCCCGCGGGTACCCCGGCCCGGGGGAGCGGGCCGCCCGGATCCCGCGCTGGTCAGGGGACTGGAGG
TGGCTCCGGAGTCTGCGCGACCTGCGAGTCGCCGTTCGACCGGGGCTGGCTCACGGTGA

Upstream 100 bases:

>100_bases
GGACGGATCTTCAGGGTCGGACGGTGCCCGGGGCCGGGTGAGCGGTTTCGATCTGCTTTACTCGGTCAAGTTATTGACTT
CGTAAAGTGGAGGGGTCGGC

Downstream 100 bases:

>100_bases
TCGTGACGGTCGCCCCCCGGGTGACGAGGCCCGCCCGCGGCAGCTGGGCGATGACGACTCCGGCCGGCTGGGAGCCTGCG
CCGCGCTCCTCGACGACGTC

Product: putative ATP-dependent DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 792; Mature: 791

Protein sequence:

>792_residues
MGDGAAEGRDEDPRSVDVRPADLRPADARSVDPWSAELAAERRHLDRARAALVRMRHEAEATEIAEGDPVADKVTNASLK
AARRRRLEALSDPASGAPLFFGRIDYAAGAAAAPGRRVHLGRRHVREAAGDDPLVVDWRTDIARPYYRAHRGDAMGLVAR
RRFGFDGPELTAFEEEPLVEPSPGPAGASRAGGPAGGDLLAREIARPRSGPMRDIVATIQPEQDEIVRADLEVSVCVQGA
PGTGKTAVGLHRAAYLLFAYRERLSRAGVLVVGPNRAFLRYIGAVLPALGEFTVTHRSLSALVDIATARGTDPEPVAEIK
SDARMAVVIRRALGATRPGASPPAALITSSLGRWTVSGDEIAGLAAGIQAGGHRHRVARDLLARRIAAAVVRRAEERGHL
PADSAVERLARTRSVRAAVDAVWPRTDAAGLIHRLFTDPALLAHAADGVLSAPEQRLLLADRPTSRRAVRWSPADLFCLD
EALDLIDGVPAFGHVIVDEAQDLSAMQCRAVGRRCATGSLTVLGDLAQGTTAWAARSWEQALAHFGKPAARLEVLTRGHR
VPAEILSFADRLLPSIAPDLPPASSTRAVPGALRVIAAPPDDLAGEAAHQVRAGLGRGGSVAVIAPDEAVGGLTASLRAA
GLPATALTDDAALTDDAALTDAALTEGASLTDKPVPEGRASRPVTVVPASLAKGLEFDHVVLVDPASVAGSGPGSVQGLR
RLYVVLTRAVTSLAVIHAGELPSALADPGGPFPRVPRPGGAGRPDPALVRGLEVAPESARPASRRSTGAGSR

Sequences:

>Translated_792_residues
MGDGAAEGRDEDPRSVDVRPADLRPADARSVDPWSAELAAERRHLDRARAALVRMRHEAEATEIAEGDPVADKVTNASLK
AARRRRLEALSDPASGAPLFFGRIDYAAGAAAAPGRRVHLGRRHVREAAGDDPLVVDWRTDIARPYYRAHRGDAMGLVAR
RRFGFDGPELTAFEEEPLVEPSPGPAGASRAGGPAGGDLLAREIARPRSGPMRDIVATIQPEQDEIVRADLEVSVCVQGA
PGTGKTAVGLHRAAYLLFAYRERLSRAGVLVVGPNRAFLRYIGAVLPALGEFTVTHRSLSALVDIATARGTDPEPVAEIK
SDARMAVVIRRALGATRPGASPPAALITSSLGRWTVSGDEIAGLAAGIQAGGHRHRVARDLLARRIAAAVVRRAEERGHL
PADSAVERLARTRSVRAAVDAVWPRTDAAGLIHRLFTDPALLAHAADGVLSAPEQRLLLADRPTSRRAVRWSPADLFCLD
EALDLIDGVPAFGHVIVDEAQDLSAMQCRAVGRRCATGSLTVLGDLAQGTTAWAARSWEQALAHFGKPAARLEVLTRGHR
VPAEILSFADRLLPSIAPDLPPASSTRAVPGALRVIAAPPDDLAGEAAHQVRAGLGRGGSVAVIAPDEAVGGLTASLRAA
GLPATALTDDAALTDDAALTDAALTEGASLTDKPVPEGRASRPVTVVPASLAKGLEFDHVVLVDPASVAGSGPGSVQGLR
RLYVVLTRAVTSLAVIHAGELPSALADPGGPFPRVPRPGGAGRPDPALVRGLEVAPESARPASRRSTGAGSR
>Mature_791_residues
GDGAAEGRDEDPRSVDVRPADLRPADARSVDPWSAELAAERRHLDRARAALVRMRHEAEATEIAEGDPVADKVTNASLKA
ARRRRLEALSDPASGAPLFFGRIDYAAGAAAAPGRRVHLGRRHVREAAGDDPLVVDWRTDIARPYYRAHRGDAMGLVARR
RFGFDGPELTAFEEEPLVEPSPGPAGASRAGGPAGGDLLAREIARPRSGPMRDIVATIQPEQDEIVRADLEVSVCVQGAP
GTGKTAVGLHRAAYLLFAYRERLSRAGVLVVGPNRAFLRYIGAVLPALGEFTVTHRSLSALVDIATARGTDPEPVAEIKS
DARMAVVIRRALGATRPGASPPAALITSSLGRWTVSGDEIAGLAAGIQAGGHRHRVARDLLARRIAAAVVRRAEERGHLP
ADSAVERLARTRSVRAAVDAVWPRTDAAGLIHRLFTDPALLAHAADGVLSAPEQRLLLADRPTSRRAVRWSPADLFCLDE
ALDLIDGVPAFGHVIVDEAQDLSAMQCRAVGRRCATGSLTVLGDLAQGTTAWAARSWEQALAHFGKPAARLEVLTRGHRV
PAEILSFADRLLPSIAPDLPPASSTRAVPGALRVIAAPPDDLAGEAAHQVRAGLGRGGSVAVIAPDEAVGGLTASLRAAG
LPATALTDDAALTDDAALTDAALTEGASLTDKPVPEGRASRPVTVVPASLAKGLEFDHVVLVDPASVAGSGPGSVQGLRR
LYVVLTRAVTSLAVIHAGELPSALADPGGPFPRVPRPGGAGRPDPALVRGLEVAPESARPASRRSTGAGSR

Specific function: Catalyzes the unwinding of duplex DNA in the 3' to 5' direction; this reaction is dependent on the hydrolysis of ATP [H]

COG id: COG3973

COG function: function code R; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 uvrD-like helicase ATP-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000212
- InterPro:   IPR014016 [H]

Pfam domain/function: PF00580 UvrD-helicase [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 82776; Mature: 82644

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDGAAEGRDEDPRSVDVRPADLRPADARSVDPWSAELAAERRHLDRARAALVRMRHEAE
CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATEIAEGDPVADKVTNASLKAARRRRLEALSDPASGAPLFFGRIDYAAGAAAAPGRRVHL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHCCCCCCCCCEEHH
GRRHVREAAGDDPLVVDWRTDIARPYYRAHRGDAMGLVARRRFGFDGPELTAFEEEPLVE
HHHHHHHHCCCCCEEEECCHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PSPGPAGASRAGGPAGGDLLAREIARPRSGPMRDIVATIQPEQDEIVRADLEVSVCVQGA
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHEEECCEEEEEEECC
PGTGKTAVGLHRAAYLLFAYRERLSRAGVLVVGPNRAFLRYIGAVLPALGEFTVTHRSLS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALVDIATARGTDPEPVAEIKSDARMAVVIRRALGATRPGASPPAALITSSLGRWTVSGDE
HHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEECCHH
IAGLAAGIQAGGHRHRVARDLLARRIAAAVVRRAEERGHLPADSAVERLARTRSVRAAVD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AVWPRTDAAGLIHRLFTDPALLAHAADGVLSAPEQRLLLADRPTSRRAVRWSPADLFCLD
HHCCCCHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCEEEECCCCCCCEEEECCCHHHHHH
EALDLIDGVPAFGHVIVDEAQDLSAMQCRAVGRRCATGSLTVLGDLAQGTTAWAARSWEQ
HHHHHHCCCCHHHHEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHH
ALAHFGKPAARLEVLTRGHRVPAEILSFADRLLPSIAPDLPPASSTRAVPGALRVIAAPP
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
DDLAGEAAHQVRAGLGRGGSVAVIAPDEAVGGLTASLRAAGLPATALTDDAALTDDAALT
HHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCHHHHHHHCCCCCHHCCCCCCCCCCHHHH
DAALTEGASLTDKPVPEGRASRPVTVVPASLAKGLEFDHVVLVDPASVAGSGPGSVQGLR
HHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCEEEEECCHHHCCCCCCHHHHHH
RLYVVLTRAVTSLAVIHAGELPSALADPGGPFPRVPRPGGAGRPDPALVRGLEVAPESAR
HHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
PASRRSTGAGSR
CCCCCCCCCCCC
>Mature Secondary Structure 
GDGAAEGRDEDPRSVDVRPADLRPADARSVDPWSAELAAERRHLDRARAALVRMRHEAE
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATEIAEGDPVADKVTNASLKAARRRRLEALSDPASGAPLFFGRIDYAAGAAAAPGRRVHL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHCCCCCCCCCEEHH
GRRHVREAAGDDPLVVDWRTDIARPYYRAHRGDAMGLVARRRFGFDGPELTAFEEEPLVE
HHHHHHHHCCCCCEEEECCHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PSPGPAGASRAGGPAGGDLLAREIARPRSGPMRDIVATIQPEQDEIVRADLEVSVCVQGA
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHEEECCEEEEEEECC
PGTGKTAVGLHRAAYLLFAYRERLSRAGVLVVGPNRAFLRYIGAVLPALGEFTVTHRSLS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALVDIATARGTDPEPVAEIKSDARMAVVIRRALGATRPGASPPAALITSSLGRWTVSGDE
HHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEECCHH
IAGLAAGIQAGGHRHRVARDLLARRIAAAVVRRAEERGHLPADSAVERLARTRSVRAAVD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AVWPRTDAAGLIHRLFTDPALLAHAADGVLSAPEQRLLLADRPTSRRAVRWSPADLFCLD
HHCCCCHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCEEEECCCCCCCEEEECCCHHHHHH
EALDLIDGVPAFGHVIVDEAQDLSAMQCRAVGRRCATGSLTVLGDLAQGTTAWAARSWEQ
HHHHHHCCCCHHHHEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHH
ALAHFGKPAARLEVLTRGHRVPAEILSFADRLLPSIAPDLPPASSTRAVPGALRVIAAPP
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
DDLAGEAAHQVRAGLGRGGSVAVIAPDEAVGGLTASLRAAGLPATALTDDAALTDDAALT
HHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCHHHHHHHCCCCCHHCCCCCCCCCCHHHH
DAALTEGASLTDKPVPEGRASRPVTVVPASLAKGLEFDHVVLVDPASVAGSGPGSVQGLR
HHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCEEEEECCHHHCCCCCCHHHHHH
RLYVVLTRAVTSLAVIHAGELPSALADPGGPFPRVPRPGGAGRPDPALVRGLEVAPESAR
HHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
PASRRSTGAGSR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]