Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is rcp1 [H]

Identifier: 158314266

GI number: 158314266

Start: 2898811

End: 2899245

Strand: Direct

Name: rcp1 [H]

Synonym: Franean1_2436

Alternate gene names: 158314266

Gene position: 2898811-2899245 (Clockwise)

Preceding gene: 158314264

Following gene: 158314267

Centisome position: 32.27

GC content: 66.21

Gene sequence:

>435_bases
GTGACCGCTGCCGCCGCTGTCCGCGCGTTCAACATCCTGCTGGTGGAGGACGACCCCGGCGACACGCTGATGGTTGAGGA
GGCGCTGACCGACCGCGGTGTCAACCATGAGCTCCACGTGGCCGTCGACGGCGTGGAGGCGATGGCCTACCTGCGGGACC
CCGCGAACCCTCGGCCCGACCTCATCCTGCTGGACCTCAACATGCCGCGGATGGACGGCCGGGAGGTTCTCAGCGCTTTG
AAGGCGGACCCGCGGCTGCTGTCCATCCCGGTGGTTGTGCTGACAACCTCGGAGGCGCCGGACGACGTGCTGTACAGCTA
CACGCTGCACGCGAACGCCTACGTCTCGAAACCCGTGGACTTCGAGGCCTTCATCGAGGTGATTCATCGGATCGACGACT
TCTATCTCGGTCTGGTGCGGCTGCCTCGCCGGTGA

Upstream 100 bases:

>100_bases
ATGGCCGGACACGGGCGTGACGCCACGGCGTCCGGCCGGTGCTCCGAGCTGATCCAGACTCTGTGACCTGATCCAGACTC
CGTGACAAGAGAGGTCGTTC

Downstream 100 bases:

>100_bases
CGCGTCAGCGAAGCCTTCCCTAACTGAGGACAGGCTAGCCTAAATAGGCGTCGATGTGAGGTTCGCGGCGCTCTTACCAG
TATGCGCGCCGGGCTCCACT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTAAAAVRAFNILLVEDDPGDTLMVEEALTDRGVNHELHVAVDGVEAMAYLRDPANPRPDLILLDLNMPRMDGREVLSAL
KADPRLLSIPVVVLTTSEAPDDVLYSYTLHANAYVSKPVDFEAFIEVIHRIDDFYLGLVRLPRR

Sequences:

>Translated_144_residues
MTAAAAVRAFNILLVEDDPGDTLMVEEALTDRGVNHELHVAVDGVEAMAYLRDPANPRPDLILLDLNMPRMDGREVLSAL
KADPRLLSIPVVVLTTSEAPDDVLYSYTLHANAYVSKPVDFEAFIEVIHRIDDFYLGLVRLPRR
>Mature_143_residues
TAAAAVRAFNILLVEDDPGDTLMVEEALTDRGVNHELHVAVDGVEAMAYLRDPANPRPDLILLDLNMPRMDGREVLSALK
ADPRLLSIPVVVLTTSEAPDDVLYSYTLHANAYVSKPVDFEAFIEVIHRIDDFYLGLVRLPRR

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: 2.7.3.-

Molecular weight: Translated: 16025; Mature: 15893

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAAVRAFNILLVEDDPGDTLMVEEALTDRGVNHELHVAVDGVEAMAYLRDPANPRPD
CCCHHEEEEEEEEEEECCCCCEEEEEEHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCC
LILLDLNMPRMDGREVLSALKADPRLLSIPVVVLTTSEAPDDVLYSYTLHANAYVSKPVD
EEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCEEECCCCC
FEAFIEVIHRIDDFYLGLVRLPRR
HHHHHHHHHHHHHHHHHEEECCCC
>Mature Secondary Structure 
TAAAAVRAFNILLVEDDPGDTLMVEEALTDRGVNHELHVAVDGVEAMAYLRDPANPRPD
CCHHEEEEEEEEEEECCCCCEEEEEEHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCC
LILLDLNMPRMDGREVLSALKADPRLLSIPVVVLTTSEAPDDVLYSYTLHANAYVSKPVD
EEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCEEECCCCC
FEAFIEVIHRIDDFYLGLVRLPRR
HHHHHHHHHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]