| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is curF [H]
Identifier: 158314221
GI number: 158314221
Start: 2846098
End: 2846592
Strand: Direct
Name: curF [H]
Synonym: Franean1_2391
Alternate gene names: 158314221
Gene position: 2846098-2846592 (Clockwise)
Preceding gene: 158314220
Following gene: 158314222
Centisome position: 31.69
GC content: 66.46
Gene sequence:
>495_bases ATGAGCGGGCACACCGACAACTCGATCTTCATCGATGCCGACATCGACCTCGTCTGGTCCATGACGAACGACCTGGAGTC CTGGCCGTCGCTGTTCACCGAGTACGCCTCGGTCGAGATCCTCGAGAAGGCCGAGAACACCTTCAAGTTCCGGCTGACGA TGCACCCGGACGAGAACGGGACGTCCTGGAGCTGGGTGTCCGAGCGCACCCTCGACCCGGTGAACCACAAGGTCCGCGCC TACCGGGTGGAGACGGGGCCCTTCGAGTACATGCACATCGAGTGGACCTACCTGCCCGAGGGCACCGGCACCCGGATGCG CTGGGTGCAGGACTTCCAGATGCGCCCGACGGCACCGGTCACCACCGAGCAGATGACCCAGCGGATCAACACGAACACGC CGCGCGAGATGGCGTCCATCCGCGGCAAGGTCGAGGCGGCGGCCAGCGCCGCCGCGCCGGCAGCCGACCAGGTCCAGGTT CCCGAGCAGGTCTGA
Upstream 100 bases:
>100_bases ACATCCTCACCACGGTGAACAGCGCGCTCCTGCAGTCCGAGGTCGCCTGAGACTCCCAGGCCGAAACCATTTCCCTCCAG TGAGCGAACCGGAGAAACAC
Downstream 100 bases:
>100_bases GGAGATAACGGTGAGCATCGCAACCCCCGCACCCCTGACGGTCCCCAAGGTCCTCTCGATCCACGACGTGCCGGCCAACC GGCGCCGCGGCGGTGACATC
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSGHTDNSIFIDADIDLVWSMTNDLESWPSLFTEYASVEILEKAENTFKFRLTMHPDENGTSWSWVSERTLDPVNHKVRA YRVETGPFEYMHIEWTYLPEGTGTRMRWVQDFQMRPTAPVTTEQMTQRINTNTPREMASIRGKVEAAASAAAPAADQVQV PEQV
Sequences:
>Translated_164_residues MSGHTDNSIFIDADIDLVWSMTNDLESWPSLFTEYASVEILEKAENTFKFRLTMHPDENGTSWSWVSERTLDPVNHKVRA YRVETGPFEYMHIEWTYLPEGTGTRMRWVQDFQMRPTAPVTTEQMTQRINTNTPREMASIRGKVEAAASAAAPAADQVQV PEQV >Mature_163_residues SGHTDNSIFIDADIDLVWSMTNDLESWPSLFTEYASVEILEKAENTFKFRLTMHPDENGTSWSWVSERTLDPVNHKVRAY RVETGPFEYMHIEWTYLPEGTGTRMRWVQDFQMRPTAPVTTEQMTQRINTNTPREMASIRGKVEAAASAAAPAADQVQVP EQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To polyketide cyclases [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 18771; Mature: 18640
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGHTDNSIFIDADIDLVWSMTNDLESWPSLFTEYASVEILEKAENTFKFRLTMHPDENG CCCCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC TSWSWVSERTLDPVNHKVRAYRVETGPFEYMHIEWTYLPEGTGTRMRWVQDFQMRPTAPV CEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCHHHHEECCCCCCCCCC TTEQMTQRINTNTPREMASIRGKVEAAASAAAPAADQVQVPEQV CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SGHTDNSIFIDADIDLVWSMTNDLESWPSLFTEYASVEILEKAENTFKFRLTMHPDENG CCCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC TSWSWVSERTLDPVNHKVRAYRVETGPFEYMHIEWTYLPEGTGTRMRWVQDFQMRPTAPV CEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCHHHHEECCCCCCCCCC TTEQMTQRINTNTPREMASIRGKVEAAASAAAPAADQVQVPEQV CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1644304 [H]