| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314164
Identifier: 158314164
GI number: 158314164
Start: 2780297
End: 2780836
Strand: Direct
Name: 158314164
Synonym: Franean1_2332
Alternate gene names: NA
Gene position: 2780297-2780836 (Clockwise)
Preceding gene: 158314163
Following gene: 158314167
Centisome position: 30.95
GC content: 62.78
Gene sequence:
>540_bases ATGGTGGATGGTGCGGCTCTTCTCCCGGACCTTGTCGGGACAGAGCGTGGTCTCGTCGTGATGATGTGCGGTCTGCCTGG CTCGGGCAAGAGCACGTATGCGCGGGCCCTTGAGCGTCGCGGCTATGCCCGACTCTCGATCGACGAGATTGTGTGGACAT GGACCGGCCGCGATGGGGCTGAACTCGACCCGGCGGAGTACGAGCATCTCAAGTCGACCGCCGAGCGGCGGTTGTGGGGC AATCTGGTCCGTTTGATGAAGGCGAAGGTTCCGATAGTCATCGACTACAGCTTCTGGAGCCGGGGCACCCGCGATCAATA CAAGGCCGCGATCGAAAGCCACGGATGTCGATGGGTACTCGTCTTCCTGCCGGCCGACCTGGAGACTCTCCGGCGTCGAT TGGCGATCCGCAACCAGCGGAACGACGCGAACAGCGTCACCGTCTCCGACGATCTTCTGGAACGCTACTTCGCCAACTTC CAGGAGCCTGTGGGCGAGGGGGAGCGCGTTATCTTCCAGTTCAGCGCCCACGCGGACTGA
Upstream 100 bases:
>100_bases GCGGCCAGTCTGATGCCCGACGTGTAGTCCAGCGACCCTTGGCATCTCGTGGCTCGCCGTCTGGTACGGACTGGGGCCTT CGGCATCCTGTAGCCTCGCC
Downstream 100 bases:
>100_bases GGCCGCTCTCCTGCGGGTTCGAGAGCAGTCGCCATGTCAGGGGGCCGCGATCAGTGTGCAGGCACTGATGGCGTTGATCG CGCGGGCCAGGCCAAGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MVDGAALLPDLVGTERGLVVMMCGLPGSGKSTYARALERRGYARLSIDEIVWTWTGRDGAELDPAEYEHLKSTAERRLWG NLVRLMKAKVPIVIDYSFWSRGTRDQYKAAIESHGCRWVLVFLPADLETLRRRLAIRNQRNDANSVTVSDDLLERYFANF QEPVGEGERVIFQFSAHAD
Sequences:
>Translated_179_residues MVDGAALLPDLVGTERGLVVMMCGLPGSGKSTYARALERRGYARLSIDEIVWTWTGRDGAELDPAEYEHLKSTAERRLWG NLVRLMKAKVPIVIDYSFWSRGTRDQYKAAIESHGCRWVLVFLPADLETLRRRLAIRNQRNDANSVTVSDDLLERYFANF QEPVGEGERVIFQFSAHAD >Mature_179_residues MVDGAALLPDLVGTERGLVVMMCGLPGSGKSTYARALERRGYARLSIDEIVWTWTGRDGAELDPAEYEHLKSTAERRLWG NLVRLMKAKVPIVIDYSFWSRGTRDQYKAAIESHGCRWVLVFLPADLETLRRRLAIRNQRNDANSVTVSDDLLERYFANF QEPVGEGERVIFQFSAHAD
Specific function: Unknown
COG id: COG0645
COG function: function code R; Predicted kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20304; Mature: 20304
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDGAALLPDLVGTERGLVVMMCGLPGSGKSTYARALERRGYARLSIDEIVWTWTGRDGA CCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHEEEEEECCCCC ELDPAEYEHLKSTAERRLWGNLVRLMKAKVPIVIDYSFWSRGTRDQYKAAIESHGCRWVL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHCCCCEEEE VFLPADLETLRRRLAIRNQRNDANSVTVSDDLLERYFANFQEPVGEGERVIFQFSAHAD EEECCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCC >Mature Secondary Structure MVDGAALLPDLVGTERGLVVMMCGLPGSGKSTYARALERRGYARLSIDEIVWTWTGRDGA CCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHEEEEEECCCCC ELDPAEYEHLKSTAERRLWGNLVRLMKAKVPIVIDYSFWSRGTRDQYKAAIESHGCRWVL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHCCCCEEEE VFLPADLETLRRRLAIRNQRNDANSVTVSDDLLERYFANFQEPVGEGERVIFQFSAHAD EEECCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA