| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pyk [H]
Identifier: 158314044
GI number: 158314044
Start: 2644455
End: 2645870
Strand: Direct
Name: pyk [H]
Synonym: Franean1_2211
Alternate gene names: 158314044
Gene position: 2644455-2645870 (Clockwise)
Preceding gene: 158314042
Following gene: 158314046
Centisome position: 29.44
GC content: 71.12
Gene sequence:
>1416_bases GTGCCACGAAGAGCCAAGATAGTTTGCACCCTCGGCCCGGCCACCAACTCTCCCGAGATGGTCCGGGCCCTCGTCGACGC CGGAATGGACATTGCCCGGCTCAACTTTTCGCACGGAACGCACGAGCAGCACGCCGCTGCGTACGCCCTGGTGCGCGAGG CGGCCGCGGCCGCCGGCCGCAGCGTGGGGATCCTGGCCGACCTGCAGGGGCCGAAGATCCGCCTCGGCAGGTTCGCCGAC GGCGGGGTCACCCTGCTGCCCGGGCAGCATTTCACCGTCACCATCCGTGACGTCCTGGGAGATCAGGAACAGGTCGGCAC CACGTACCCGGGCCTGACCCGGGACGTCGCCGCCGGGGACACCATCCTCGTCGACGACGGCCGGCTGAACCTGCGGATCG ACGGGGTCGAGGACACCGACGTCCGCACCACCGTCGTGATCGGCGGCAAGGTCAGCGACAACAAGGGGATGAACATCCCG AGCGCCGCGCTGACGGTGCCGGCGCTGTCCGAGAAGGACGCCGACGACCTGCGCTTCGCGCTCGAGCTCGGCGTCGACAT GATCGCGCTGTCGTTCGTCCGGTCCGCCGAGGACTACGCGGCCGTCCGCTCGATCATGGACGAGGTCGGGATCCGGGTTC CCGTCCTCGCGAAGATCGAGAAGCCGCAGGCCGTCGACGAGCTCGACGGGATCATCGAGGCCTTCGACGGCCTCATGATC GCCCGCGGTGACCTCGGTGTCGAGCTGCCGCTCGAGGACGTCCCCCTCGTCCAGAAGCGGGCCGTGAGCCAGGCGCGTGA GCGGGCCAAGCCGGTCATCGTCGCCACCCAGGTGCTCGAGTCGATGGTGAGCGCGCCCCGGCCGACCCGCGCGGAGGCGA GCGACTGCGCCAACGCCGTGCTGGACGGTGCCGACGCGATCATGCTTTCGGCCGAGACCAGTGTCGGGTCGTATCCGGTC GAGTCGGCCGCGACCATGGCGCGGATCATCGAGACCGCCGAGGCGGATCTCGGCCGCATCCCCCCGCTGCGGACCCCGCC GCGCACCCTCGGCGGCGCGATCGCCCAGGCGGCGGTGAGTGTCGGGGAGGCGGTCGGTGCCCGCTACCTGGTGGCCCACA CCCTCAGCGGGGACACCGCCCGGCGGCTGATCCGATACCGCAGCTCGGTGCCCGTCATCGCCTTCACCCCCATTCCCAGC GTGCGCAGCCAGATGGCGTTGCTGTGGGGTGTGGAGACGGTGCTGGTGCCGTTCGCGGAGAGCACCGACGAGATGGTCCG GCAGGTCGACACGGCCCTGCAGCAGGTCGGGCACTGCCGGCCCGGCGAGCTGGTGGTCGTCGTCGCCGGTACTCCGCCGG GCGTCGCCGGCATGACCAACGCGATGCGGGTGCACCGCATCGGCGAGGCGGTCTGA
Upstream 100 bases:
>100_bases TCACAGAACCTCTCGGGACTAAGTGGCCCAGAACCGCCGGATCGAGTGTGTCACCAGGGCCCATGTCCTATCCCGGGCGT TCGTTACCTAGGCTTTGACC
Downstream 100 bases:
>100_bases CCGGGCCCGCGGGCCCGTGCCCGCCGCGGGAGTGCCGCCGCCGGTCGCTCGCGATCGGTGGCCCGTGGCGGGCTGGAGCG GCACGATCGTGGTGGGGCCG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MPRRAKIVCTLGPATNSPEMVRALVDAGMDIARLNFSHGTHEQHAAAYALVREAAAAAGRSVGILADLQGPKIRLGRFAD GGVTLLPGQHFTVTIRDVLGDQEQVGTTYPGLTRDVAAGDTILVDDGRLNLRIDGVEDTDVRTTVVIGGKVSDNKGMNIP SAALTVPALSEKDADDLRFALELGVDMIALSFVRSAEDYAAVRSIMDEVGIRVPVLAKIEKPQAVDELDGIIEAFDGLMI ARGDLGVELPLEDVPLVQKRAVSQARERAKPVIVATQVLESMVSAPRPTRAEASDCANAVLDGADAIMLSAETSVGSYPV ESAATMARIIETAEADLGRIPPLRTPPRTLGGAIAQAAVSVGEAVGARYLVAHTLSGDTARRLIRYRSSVPVIAFTPIPS VRSQMALLWGVETVLVPFAESTDEMVRQVDTALQQVGHCRPGELVVVVAGTPPGVAGMTNAMRVHRIGEAV
Sequences:
>Translated_471_residues MPRRAKIVCTLGPATNSPEMVRALVDAGMDIARLNFSHGTHEQHAAAYALVREAAAAAGRSVGILADLQGPKIRLGRFAD GGVTLLPGQHFTVTIRDVLGDQEQVGTTYPGLTRDVAAGDTILVDDGRLNLRIDGVEDTDVRTTVVIGGKVSDNKGMNIP SAALTVPALSEKDADDLRFALELGVDMIALSFVRSAEDYAAVRSIMDEVGIRVPVLAKIEKPQAVDELDGIIEAFDGLMI ARGDLGVELPLEDVPLVQKRAVSQARERAKPVIVATQVLESMVSAPRPTRAEASDCANAVLDGADAIMLSAETSVGSYPV ESAATMARIIETAEADLGRIPPLRTPPRTLGGAIAQAAVSVGEAVGARYLVAHTLSGDTARRLIRYRSSVPVIAFTPIPS VRSQMALLWGVETVLVPFAESTDEMVRQVDTALQQVGHCRPGELVVVVAGTPPGVAGMTNAMRVHRIGEAV >Mature_470_residues PRRAKIVCTLGPATNSPEMVRALVDAGMDIARLNFSHGTHEQHAAAYALVREAAAAAGRSVGILADLQGPKIRLGRFADG GVTLLPGQHFTVTIRDVLGDQEQVGTTYPGLTRDVAAGDTILVDDGRLNLRIDGVEDTDVRTTVVIGGKVSDNKGMNIPS AALTVPALSEKDADDLRFALELGVDMIALSFVRSAEDYAAVRSIMDEVGIRVPVLAKIEKPQAVDELDGIIEAFDGLMIA RGDLGVELPLEDVPLVQKRAVSQARERAKPVIVATQVLESMVSAPRPTRAEASDCANAVLDGADAIMLSAETSVGSYPVE SAATMARIIETAEADLGRIPPLRTPPRTLGGAIAQAAVSVGEAVGARYLVAHTLSGDTARRLIRYRSSVPVIAFTPIPSV RSQMALLWGVETVLVPFAESTDEMVRQVDTALQQVGHCRPGELVVVVAGTPPGVAGMTNAMRVHRIGEAV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=489, Percent_Identity=39.2638036809816, Blast_Score=317, Evalue=2e-86, Organism=Homo sapiens, GI33286422, Length=486, Percent_Identity=39.0946502057613, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI33286420, Length=486, Percent_Identity=39.0946502057613, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI10835121, Length=492, Percent_Identity=40.8536585365854, Blast_Score=312, Evalue=5e-85, Organism=Homo sapiens, GI32967597, Length=492, Percent_Identity=40.8536585365854, Blast_Score=311, Evalue=8e-85, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=39.0243902439024, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=39.0243902439024, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=36.5957446808511, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=36.5957446808511, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=35.981308411215, Blast_Score=132, Evalue=5e-31, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=39.1489361702128, Blast_Score=333, Evalue=2e-92, Organism=Escherichia coli, GI1788160, Length=475, Percent_Identity=40.2105263157895, Blast_Score=305, Evalue=4e-84, Organism=Caenorhabditis elegans, GI17544584, Length=487, Percent_Identity=39.2197125256673, Blast_Score=318, Evalue=4e-87, Organism=Caenorhabditis elegans, GI71984413, Length=488, Percent_Identity=38.9344262295082, Blast_Score=288, Evalue=6e-78, Organism=Caenorhabditis elegans, GI71984406, Length=488, Percent_Identity=38.9344262295082, Blast_Score=287, Evalue=7e-78, Organism=Caenorhabditis elegans, GI17506829, Length=488, Percent_Identity=38.9344262295082, Blast_Score=287, Evalue=8e-78, Organism=Caenorhabditis elegans, GI17506831, Length=488, Percent_Identity=38.9344262295082, Blast_Score=287, Evalue=1e-77, Organism=Saccharomyces cerevisiae, GI6319279, Length=483, Percent_Identity=35.8178053830228, Blast_Score=290, Evalue=3e-79, Organism=Saccharomyces cerevisiae, GI6324923, Length=486, Percent_Identity=35.3909465020576, Blast_Score=266, Evalue=6e-72, Organism=Drosophila melanogaster, GI24648964, Length=489, Percent_Identity=39.6728016359918, Blast_Score=303, Evalue=2e-82, Organism=Drosophila melanogaster, GI28571814, Length=489, Percent_Identity=39.6728016359918, Blast_Score=302, Evalue=3e-82, Organism=Drosophila melanogaster, GI24648966, Length=412, Percent_Identity=37.621359223301, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24581235, Length=483, Percent_Identity=33.1262939958592, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24646914, Length=275, Percent_Identity=36, Blast_Score=155, Evalue=8e-38,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 49671; Mature: 49539
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRAKIVCTLGPATNSPEMVRALVDAGMDIARLNFSHGTHEQHAAAYALVREAAAAAGR CCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCC SVGILADLQGPKIRLGRFADGGVTLLPGQHFTVTIRDVLGDQEQVGTTYPGLTRDVAAGD CEEEEEECCCCCEEEEEECCCCEEEECCCEEEEEHHHHHCCHHHCCCCCCCCCHHHCCCC TILVDDGRLNLRIDGVEDTDVRTTVVIGGKVSDNKGMNIPSAALTVPALSEKDADDLRFA EEEEECCEEEEEECCCCCCCCEEEEEECCEECCCCCCCCCHHHEECCCCCCCCHHHHHHH LELGVDMIALSFVRSAEDYAAVRSIMDEVGIRVPVLAKIEKPQAVDELDGIIEAFDGLMI HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCEEE ARGDLGVELPLEDVPLVQKRAVSQARERAKPVIVATQVLESMVSAPRPTRAEASDCANAV EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHH LDGADAIMLSAETSVGSYPVESAATMARIIETAEADLGRIPPLRTPPRTLGGAIAQAAVS HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH VGEAVGARYLVAHTLSGDTARRLIRYRSSVPVIAFTPIPSVRSQMALLWGVETVLVPFAE HHHHHCCEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEECCC STDEMVRQVDTALQQVGHCRPGELVVVVAGTPPGVAGMTNAMRVHRIGEAV CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PRRAKIVCTLGPATNSPEMVRALVDAGMDIARLNFSHGTHEQHAAAYALVREAAAAAGR CCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCC SVGILADLQGPKIRLGRFADGGVTLLPGQHFTVTIRDVLGDQEQVGTTYPGLTRDVAAGD CEEEEEECCCCCEEEEEECCCCEEEECCCEEEEEHHHHHCCHHHCCCCCCCCCHHHCCCC TILVDDGRLNLRIDGVEDTDVRTTVVIGGKVSDNKGMNIPSAALTVPALSEKDADDLRFA EEEEECCEEEEEECCCCCCCCEEEEEECCEECCCCCCCCCHHHEECCCCCCCCHHHHHHH LELGVDMIALSFVRSAEDYAAVRSIMDEVGIRVPVLAKIEKPQAVDELDGIIEAFDGLMI HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCEEE ARGDLGVELPLEDVPLVQKRAVSQARERAKPVIVATQVLESMVSAPRPTRAEASDCANAV EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHH LDGADAIMLSAETSVGSYPVESAATMARIIETAEADLGRIPPLRTPPRTLGGAIAQAAVS HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH VGEAVGARYLVAHTLSGDTARRLIRYRSSVPVIAFTPIPSVRSQMALLWGVETVLVPFAE HHHHHCCEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEECCC STDEMVRQVDTALQQVGHCRPGELVVVVAGTPPGVAGMTNAMRVHRIGEAV CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA