| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is yfcX [C]
Identifier: 158314041
GI number: 158314041
Start: 2641029
End: 2641865
Strand: Direct
Name: yfcX [C]
Synonym: Franean1_2208
Alternate gene names: 158314041
Gene position: 2641029-2641865 (Clockwise)
Preceding gene: 158314040
Following gene: 158314042
Centisome position: 29.4
GC content: 75.27
Gene sequence:
>837_bases ATGAGCATGCCGGCCGCCGCCGACCCGGCGGCGGCCGGGCTGGGCGTACTCGCAGCTGGCCCTTGCGTCTCGCTCACTGT GAGTGAAGATGTGTCGGGTTGGGTGGGCGACACGCCCACCCTCCCGTCCATCGCCGCGGCGATGGACGGCATCCTGCGCG ACCTGCGCGGCGACGTCCGTGTCGTCGTCGTGAACGCCGTACACCGTCTGTCGGCTCCGGTCGACCACAAGGTCGACCAC AAGACCAGCCACGAAATCGAACACAGAGCCGATCACGAGGTCGGCCACCAGACCGGCCCGACGGCCGGCCCATCCGCCGG CGGGGTCGCGGCCGGGCGGAACCTCGCCACGTGGTCCCGGGTCGCGCGCCGGCTGTCCGAGCGGCCGGACCTGCTCAGCA TCGCTGTCTCCGCCGGGCCGACGACGGGCCCGGGGCTGGCACTGGCCCTCGCCTGCGACCTGCGGGTACTGACCGAGGAC GCATCCCTGTGCCTCACCGAGGCCACGGCCGGTCGCGTGCCGGGCCTGGGCGTTGCGGGTACCCTCGTCGACACCGTCGG CTACGCCCGCGCGCTTGCGCTCTGTCTGACCGGCAGGCCGGTGGGCGCGCGGGACGCGCTCCGGCTCGGCCTCGCCGCGC TCGTCGTCCCCCGCCGGGACCTCGACGCCGAGGTCGGCCGCTTGGTGGACCGCCTGCTCGCGGTGCCGCCCGACGTCAGC GCGGAGACGAAGGCGCTGCTCGCCGGCGCCCGCGAGCGGTCGGGCATCCAGCGCCGCGCGGCGGAGGACGACGCCCTCGC GCGGGTCCTCGCCACGACCGCCGGGAATGCGGGCTAG
Upstream 100 bases:
>100_bases GTTCGTACGGGTTCGTCCACCGGATCCTGTCCGAGTCGGGCACGACGCTGCGCGGACGTGGGGGCGCGACCCGGGGTACC AAGAAGAAAAGCGCCTGACC
Downstream 100 bases:
>100_bases CAAACCCTCGCTTACACCGTTACGTAGTAACACGTAGCGGTGCGTCGGAGGCTCCATGAGAACTGCGGTCGACAACTGGT CCACGATGCGCTCGTTCCAA
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSMPAAADPAAAGLGVLAAGPCVSLTVSEDVSGWVGDTPTLPSIAAAMDGILRDLRGDVRVVVVNAVHRLSAPVDHKVDH KTSHEIEHRADHEVGHQTGPTAGPSAGGVAAGRNLATWSRVARRLSERPDLLSIAVSAGPTTGPGLALALACDLRVLTED ASLCLTEATAGRVPGLGVAGTLVDTVGYARALALCLTGRPVGARDALRLGLAALVVPRRDLDAEVGRLVDRLLAVPPDVS AETKALLAGARERSGIQRRAAEDDALARVLATTAGNAG
Sequences:
>Translated_278_residues MSMPAAADPAAAGLGVLAAGPCVSLTVSEDVSGWVGDTPTLPSIAAAMDGILRDLRGDVRVVVVNAVHRLSAPVDHKVDH KTSHEIEHRADHEVGHQTGPTAGPSAGGVAAGRNLATWSRVARRLSERPDLLSIAVSAGPTTGPGLALALACDLRVLTED ASLCLTEATAGRVPGLGVAGTLVDTVGYARALALCLTGRPVGARDALRLGLAALVVPRRDLDAEVGRLVDRLLAVPPDVS AETKALLAGARERSGIQRRAAEDDALARVLATTAGNAG >Mature_277_residues SMPAAADPAAAGLGVLAAGPCVSLTVSEDVSGWVGDTPTLPSIAAAMDGILRDLRGDVRVVVVNAVHRLSAPVDHKVDHK TSHEIEHRADHEVGHQTGPTAGPSAGGVAAGRNLATWSRVARRLSERPDLLSIAVSAGPTTGPGLALALACDLRVLTEDA SLCLTEATAGRVPGLGVAGTLVDTVGYARALALCLTGRPVGARDALRLGLAALVVPRRDLDAEVGRLVDRLLAVPPDVSA ETKALLAGARERSGIQRRAAEDDALARVLATTAGNAG
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Drosophila melanogaster, GI20129971, Length=130, Percent_Identity=33.8461538461538, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24653477, Length=130, Percent_Identity=33.8461538461538, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28247; Mature: 28116
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPAAADPAAAGLGVLAAGPCVSLTVSEDVSGWVGDTPTLPSIAAAMDGILRDLRGDVR CCCCCCCCCHHHCCHHEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE VVVVNAVHRLSAPVDHKVDHKTSHEIEHRADHEVGHQTGPTAGPSAGGVAAGRNLATWSR EEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH VARRLSERPDLLSIAVSAGPTTGPGLALALACDLRVLTEDASLCLTEATAGRVPGLGVAG HHHHHHCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHCCHHHEEEHHHCCCCCCCCHHH TLVDTVGYARALALCLTGRPVGARDALRLGLAALVVPRRDLDAEVGRLVDRLLAVPPDVS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC AETKALLAGARERSGIQRRAAEDDALARVLATTAGNAG HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SMPAAADPAAAGLGVLAAGPCVSLTVSEDVSGWVGDTPTLPSIAAAMDGILRDLRGDVR CCCCCCCCHHHCCHHEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE VVVVNAVHRLSAPVDHKVDHKTSHEIEHRADHEVGHQTGPTAGPSAGGVAAGRNLATWSR EEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH VARRLSERPDLLSIAVSAGPTTGPGLALALACDLRVLTEDASLCLTEATAGRVPGLGVAG HHHHHHCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHCCHHHEEEHHHCCCCCCCCHHH TLVDTVGYARALALCLTGRPVGARDALRLGLAALVVPRRDLDAEVGRLVDRLLAVPPDVS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC AETKALLAGARERSGIQRRAAEDDALARVLATTAGNAG HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA