| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313956
Identifier: 158313956
GI number: 158313956
Start: 2549339
End: 2550025
Strand: Direct
Name: 158313956
Synonym: Franean1_2122
Alternate gene names: NA
Gene position: 2549339-2550025 (Clockwise)
Preceding gene: 158313955
Following gene: 158313957
Centisome position: 28.38
GC content: 73.51
Gene sequence:
>687_bases GTGGACCTGTCCCTCCGGCGGCTTGTGCCCCGTCCGCCCTCGGCGTCCTGGTTCAGGGTGCCCTGGTGGCGCTGGGCGGC CCGAATCGTCGCGATCATCGTCGGGATCGTGCTGCTCGGGTCCGTGATGACCTTCGGGCAGGTGTGGTGGGTCGGGCGCG GTGACGACCGGCGGGCCTCCGACGCGCTGATCGTCCTGGGCGCCTCGCAGTACGACGGCCGTCCGTCCGCCATCCTGGCC GCCCGGCTCGACCACGCCCTCGAGCTCTATCGGTCCGGCGTCGCGCCGCGGGTCATCACGGTGGGCGGCAACCAGCCGGG GGACCGCTTCACCGAGGCCGAGGCCGCCGGGTCCTACCTACGTGACCGCGGCGTGCCGTCCAGTGCCGTGCTGGTGGTGC CCCAGGGTGTCGACACACTGTCGTCGCTGACCGCGGTGGCCGGGCTGATGGACAGCCGGCAGTGGCGGTCCGCGGTGGTG GTGACCGACCGCTGGCACAGCCTGCGCTCCCGGGCGATCGCCGACGACCTCGGCGTCGACGCGGTGACGTCGCCGGCGAC GTCGGGCCCGGCCAACCGCGGGTTCGGCACCCAGATGCGGTACATCCTGCGCGAGGGGATCGGGTACCGCTTCTACCAGC TGTTCCACCGGGCCTCGCCGTCCGCGGCCCACACACCCGCCGTCTGA
Upstream 100 bases:
>100_bases GCGGCGCCGACGGCCCCACCGGCACCTGAGTACGCGTCGCGGAGCACCCAGGTGCGCCCGGGAGGTTTGGGCTGGTCCCG GACGGCTAACGTGACATCGC
Downstream 100 bases:
>100_bases CCCGCCCGGGGATCCCCGGGCGGGTGCCCCACCGGGGGGCGGCGGGACGCGCCCGCCGCGTGATGATCACCACGGTGTGG CGTCGGCCCGGGACGGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MDLSLRRLVPRPPSASWFRVPWWRWAARIVAIIVGIVLLGSVMTFGQVWWVGRGDDRRASDALIVLGASQYDGRPSAILA ARLDHALELYRSGVAPRVITVGGNQPGDRFTEAEAAGSYLRDRGVPSSAVLVVPQGVDTLSSLTAVAGLMDSRQWRSAVV VTDRWHSLRSRAIADDLGVDAVTSPATSGPANRGFGTQMRYILREGIGYRFYQLFHRASPSAAHTPAV
Sequences:
>Translated_228_residues MDLSLRRLVPRPPSASWFRVPWWRWAARIVAIIVGIVLLGSVMTFGQVWWVGRGDDRRASDALIVLGASQYDGRPSAILA ARLDHALELYRSGVAPRVITVGGNQPGDRFTEAEAAGSYLRDRGVPSSAVLVVPQGVDTLSSLTAVAGLMDSRQWRSAVV VTDRWHSLRSRAIADDLGVDAVTSPATSGPANRGFGTQMRYILREGIGYRFYQLFHRASPSAAHTPAV >Mature_228_residues MDLSLRRLVPRPPSASWFRVPWWRWAARIVAIIVGIVLLGSVMTFGQVWWVGRGDDRRASDALIVLGASQYDGRPSAILA ARLDHALELYRSGVAPRVITVGGNQPGDRFTEAEAAGSYLRDRGVPSSAVLVVPQGVDTLSSLTAVAGLMDSRQWRSAVV VTDRWHSLRSRAIADDLGVDAVTSPATSGPANRGFGTQMRYILREGIGYRFYQLFHRASPSAAHTPAV
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24822; Mature: 24822
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSLRRLVPRPPSASWFRVPWWRWAARIVAIIVGIVLLGSVMTFGQVWWVGRGDDRRAS CCCCCCHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC DALIVLGASQYDGRPSAILAARLDHALELYRSGVAPRVITVGGNQPGDRFTEAEAAGSYL CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHH RDRGVPSSAVLVVPQGVDTLSSLTAVAGLMDSRQWRSAVVVTDRWHSLRSRAIADDLGVD HHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHCCCC AVTSPATSGPANRGFGTQMRYILREGIGYRFYQLFHRASPSAAHTPAV CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDLSLRRLVPRPPSASWFRVPWWRWAARIVAIIVGIVLLGSVMTFGQVWWVGRGDDRRAS CCCCCCHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC DALIVLGASQYDGRPSAILAARLDHALELYRSGVAPRVITVGGNQPGDRFTEAEAAGSYL CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHH RDRGVPSSAVLVVPQGVDTLSSLTAVAGLMDSRQWRSAVVVTDRWHSLRSRAIADDLGVD HHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHCCCC AVTSPATSGPANRGFGTQMRYILREGIGYRFYQLFHRASPSAAHTPAV CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA