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The map label for this gene is yurY [H]

Identifier: 158313923

GI number: 158313923

Start: 2513703

End: 2514485

Strand: Direct

Name: yurY [H]

Synonym: Franean1_2088

Alternate gene names: 158313923

Gene position: 2513703-2514485 (Clockwise)

Preceding gene: 158313922

Following gene: 158313924

Centisome position: 27.99

GC content: 69.6

Gene sequence:

>783_bases
GTGTCTGTTCTCGAGATCCGCAACTTGCACGTGTCGGTGGACACCGACACCGAGGGCCCGCGCGAGATCCTGCGCGGGGT
CGACCTCACCGTCCGCAAGGGCGAGACACACGCGATCATGGGGCCGAACGGCTCCGGCAAGTCCACGCTGTCCTACTCCA
TCGCCGGCCACCCCAAGTACACGGTCACCGAGGGCACCGTCACCCTCGACGGCGAGGACGTCCTCGCCATGTCCGTGGAC
GCCCGCGCGCGGGCCGGGATCTTCCTGGCGATGCAGTACCCGGTCGAGGTGCCCGGCGTCTCGGTGTCGAACTTCCTGCG
CTCGTCGGCGACGGCGGTGCGTGGCGAGGCGCCGAAGCTGCGCACCTGGGTCAAGGAGGTCAAGCAGGCGATGGCCGGGC
TGGAGATGGACCCGGCGTTCGCCGAGCGCAGCGTCAACGAGGGCTTCTCCGGCGGAGAGAAGAAGCGCCACGAGATCCTG
CAGATGACGCTGCTCGCGCCGAAGGTCGCCATTCTCGACGAGACCGACTCCGGCCTGGACGTCGACGCGCTGCGCATCGT
CTCCGCCGGCATCGAGGCGGTGCGGGCCAAGGGGGAGACGGGCATCCTGCTCATCACCCACTACACCCGCATCCTGCGCT
ACGTGAAGCCCGAGTTCGTGCACGTCATGGCGGGCGGGCGGATCGTGGACGAGGGCGGCCCCGAGCTCGCGGCGACCCTG
GAGGATTCCGGCTACGACCGGTACGTCAAGGGCGTGGAGCCGGCGGCGGCGGCGGTCTCATGA

Upstream 100 bases:

>100_bases
TGCCGGCGATCGACCCGGTGCCCACATATCCAGTGACCATCGACGGCGACGACGTCCTCGTCGACCTTCACACGAACCCG
AAGCGAGGGTGACGACCGCG

Downstream 100 bases:

>100_bases
CCGTCGTCGAGACACGCGCGGCGGGGGCCGGCGCGCACGCCGGCGCCGGGTTCGACGTCGAGCGGGTCCGTCGCGACTTC
CCGATCCTCGCCCGCACGGT

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSVLEIRNLHVSVDTDTEGPREILRGVDLTVRKGETHAIMGPNGSGKSTLSYSIAGHPKYTVTEGTVTLDGEDVLAMSVD
ARARAGIFLAMQYPVEVPGVSVSNFLRSSATAVRGEAPKLRTWVKEVKQAMAGLEMDPAFAERSVNEGFSGGEKKRHEIL
QMTLLAPKVAILDETDSGLDVDALRIVSAGIEAVRAKGETGILLITHYTRILRYVKPEFVHVMAGGRIVDEGGPELAATL
EDSGYDRYVKGVEPAAAAVS

Sequences:

>Translated_260_residues
MSVLEIRNLHVSVDTDTEGPREILRGVDLTVRKGETHAIMGPNGSGKSTLSYSIAGHPKYTVTEGTVTLDGEDVLAMSVD
ARARAGIFLAMQYPVEVPGVSVSNFLRSSATAVRGEAPKLRTWVKEVKQAMAGLEMDPAFAERSVNEGFSGGEKKRHEIL
QMTLLAPKVAILDETDSGLDVDALRIVSAGIEAVRAKGETGILLITHYTRILRYVKPEFVHVMAGGRIVDEGGPELAATL
EDSGYDRYVKGVEPAAAAVS
>Mature_259_residues
SVLEIRNLHVSVDTDTEGPREILRGVDLTVRKGETHAIMGPNGSGKSTLSYSIAGHPKYTVTEGTVTLDGEDVLAMSVDA
RARAGIFLAMQYPVEVPGVSVSNFLRSSATAVRGEAPKLRTWVKEVKQAMAGLEMDPAFAERSVNEGFSGGEKKRHEILQ
MTLLAPKVAILDETDSGLDVDALRIVSAGIEAVRAKGETGILLITHYTRILRYVKPEFVHVMAGGRIVDEGGPELAATLE
DSGYDRYVKGVEPAAAAVS

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9955963, Length=238, Percent_Identity=30.672268907563, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI42741659, Length=208, Percent_Identity=31.25, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI9961250, Length=239, Percent_Identity=30.1255230125523, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4505771, Length=239, Percent_Identity=30.1255230125523, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI9961252, Length=239, Percent_Identity=30.1255230125523, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI171184400, Length=233, Percent_Identity=29.1845493562232, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787972, Length=247, Percent_Identity=50.6072874493927, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI87081709, Length=234, Percent_Identity=28.2051282051282, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788506, Length=216, Percent_Identity=25.462962962963, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787370, Length=215, Percent_Identity=27.4418604651163, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788225, Length=240, Percent_Identity=29.5833333333333, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787792, Length=235, Percent_Identity=25.1063829787234, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787029, Length=228, Percent_Identity=28.5087719298246, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1786319, Length=191, Percent_Identity=30.3664921465969, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786345, Length=219, Percent_Identity=27.8538812785388, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=236, Percent_Identity=31.7796610169492, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI212646699, Length=236, Percent_Identity=29.2372881355932, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=235, Percent_Identity=29.7872340425532, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193202349, Length=229, Percent_Identity=28.3842794759825, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=236, Percent_Identity=29.2372881355932, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=230, Percent_Identity=28.2608695652174, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=230, Percent_Identity=28.2608695652174, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=230, Percent_Identity=28.2608695652174, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=245, Percent_Identity=27.7551020408163, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=236, Percent_Identity=26.6949152542373, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=213, Percent_Identity=25.8215962441315, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24659289, Length=222, Percent_Identity=29.2792792792793, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27847; Mature: 27716

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLEIRNLHVSVDTDTEGPREILRGVDLTVRKGETHAIMGPNGSGKSTLSYSIAGHPKY
CCCEEEEEEEEEEECCCCCHHHHHCCCCEEEECCCEEEEECCCCCCCCEEEEEECCCCCE
TVTEGTVTLDGEDVLAMSVDARARAGIFLAMQYPVEVPGVSVSNFLRSSATAVRGEAPKL
EEECCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHH
RTWVKEVKQAMAGLEMDPAFAERSVNEGFSGGEKKRHEILQMTLLAPKVAILDETDSGLD
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCC
VDALRIVSAGIEAVRAKGETGILLITHYTRILRYVKPEFVHVMAGGRIVDEGGPELAATL
HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEE
EDSGYDRYVKGVEPAAAAVS
CCCCCHHHHCCCCCHHHCCC
>Mature Secondary Structure 
SVLEIRNLHVSVDTDTEGPREILRGVDLTVRKGETHAIMGPNGSGKSTLSYSIAGHPKY
CCEEEEEEEEEEECCCCCHHHHHCCCCEEEECCCEEEEECCCCCCCCEEEEEECCCCCE
TVTEGTVTLDGEDVLAMSVDARARAGIFLAMQYPVEVPGVSVSNFLRSSATAVRGEAPKL
EEECCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHH
RTWVKEVKQAMAGLEMDPAFAERSVNEGFSGGEKKRHEILQMTLLAPKVAILDETDSGLD
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCC
VDALRIVSAGIEAVRAKGETGILLITHYTRILRYVKPEFVHVMAGGRIVDEGGPELAATL
HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEE
EDSGYDRYVKGVEPAAAAVS
CCCCCHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]